data_5EB2 # _model_server_result.job_id lPBBCq_yW9U_eRrpaPiaHw _model_server_result.datetime_utc '2024-11-08 06:54:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eb2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 5EB2 # _exptl.entry_id 5EB2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EB2 _cell.length_a 120.875 _cell.length_b 120.875 _cell.length_c 88.457 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EB2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 40 A CYS 71 1_555 A SG CYS 79 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 114 A CYS 145 1_555 A SG CYS 121 A CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 40 B CYS 71 1_555 B SG CYS 79 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 114 B CYS 145 1_555 B SG CYS 121 B CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5EB2 _atom_sites.fract_transf_matrix[1][1] 0.008273 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 201 1 TRP TRP . D 3 SO4 A 1 202 1 SO4 SO4 . E 3 SO4 A 1 203 2 SO4 SO4 . F 4 HOH A 1 301 14 HOH HOH . F 4 HOH A 2 302 75 HOH HOH . F 4 HOH A 3 303 1 HOH HOH . F 4 HOH A 4 304 42 HOH HOH . F 4 HOH A 5 305 68 HOH HOH . F 4 HOH A 6 306 70 HOH HOH . F 4 HOH A 7 307 52 HOH HOH . F 4 HOH A 8 308 8 HOH HOH . F 4 HOH A 9 309 21 HOH HOH . F 4 HOH A 10 310 27 HOH HOH . F 4 HOH A 11 311 6 HOH HOH . F 4 HOH A 12 312 37 HOH HOH . F 4 HOH A 13 313 55 HOH HOH . F 4 HOH A 14 314 9 HOH HOH . F 4 HOH A 15 315 44 HOH HOH . F 4 HOH A 16 316 69 HOH HOH . F 4 HOH A 17 317 34 HOH HOH . F 4 HOH A 18 318 13 HOH HOH . F 4 HOH A 19 319 51 HOH HOH . F 4 HOH A 20 320 96 HOH HOH . F 4 HOH A 21 321 11 HOH HOH . F 4 HOH A 22 322 24 HOH HOH . F 4 HOH A 23 323 49 HOH HOH . F 4 HOH A 24 324 16 HOH HOH . F 4 HOH A 25 325 3 HOH HOH . F 4 HOH A 26 326 64 HOH HOH . F 4 HOH A 27 327 18 HOH HOH . F 4 HOH A 28 328 17 HOH HOH . F 4 HOH A 29 329 48 HOH HOH . F 4 HOH A 30 330 93 HOH HOH . F 4 HOH A 31 331 62 HOH HOH . F 4 HOH A 32 332 10 HOH HOH . F 4 HOH A 33 333 72 HOH HOH . F 4 HOH A 34 334 32 HOH HOH . F 4 HOH A 35 335 22 HOH HOH . F 4 HOH A 36 336 76 HOH HOH . F 4 HOH A 37 337 36 HOH HOH . F 4 HOH A 38 338 40 HOH HOH . F 4 HOH A 39 339 66 HOH HOH . F 4 HOH A 40 340 97 HOH HOH . F 4 HOH A 41 341 54 HOH HOH . F 4 HOH A 42 342 77 HOH HOH . F 4 HOH A 43 343 33 HOH HOH . F 4 HOH A 44 344 74 HOH HOH . F 4 HOH A 45 345 26 HOH HOH . F 4 HOH A 46 346 84 HOH HOH . F 4 HOH A 47 347 12 HOH HOH . F 4 HOH A 48 348 81 HOH HOH . F 4 HOH A 49 349 85 HOH HOH . F 4 HOH A 50 350 41 HOH HOH . F 4 HOH A 51 351 88 HOH HOH . F 4 HOH A 52 352 73 HOH HOH . F 4 HOH A 53 353 63 HOH HOH . F 4 HOH A 54 354 60 HOH HOH . F 4 HOH A 55 355 61 HOH HOH . F 4 HOH A 56 356 56 HOH HOH . F 4 HOH A 57 357 89 HOH HOH . F 4 HOH A 58 358 45 HOH HOH . F 4 HOH A 59 359 83 HOH HOH . F 4 HOH A 60 360 57 HOH HOH . G 4 HOH B 1 201 15 HOH HOH . G 4 HOH B 2 202 29 HOH HOH . G 4 HOH B 3 203 25 HOH HOH . G 4 HOH B 4 204 30 HOH HOH . G 4 HOH B 5 205 98 HOH HOH . G 4 HOH B 6 206 71 HOH HOH . G 4 HOH B 7 207 23 HOH HOH . G 4 HOH B 8 208 7 HOH HOH . G 4 HOH B 9 209 35 HOH HOH . G 4 HOH B 10 210 59 HOH HOH . G 4 HOH B 11 211 5 HOH HOH . G 4 HOH B 12 212 4 HOH HOH . G 4 HOH B 13 213 91 HOH HOH . G 4 HOH B 14 214 2 HOH HOH . G 4 HOH B 15 215 43 HOH HOH . G 4 HOH B 16 216 80 HOH HOH . G 4 HOH B 17 217 50 HOH HOH . G 4 HOH B 18 218 53 HOH HOH . G 4 HOH B 19 219 92 HOH HOH . G 4 HOH B 20 220 90 HOH HOH . G 4 HOH B 21 221 86 HOH HOH . G 4 HOH B 22 222 31 HOH HOH . G 4 HOH B 23 223 38 HOH HOH . G 4 HOH B 24 224 78 HOH HOH . G 4 HOH B 25 225 19 HOH HOH . G 4 HOH B 26 226 46 HOH HOH . G 4 HOH B 27 227 82 HOH HOH . G 4 HOH B 28 228 65 HOH HOH . G 4 HOH B 29 229 47 HOH HOH . G 4 HOH B 30 230 39 HOH HOH . G 4 HOH B 31 231 20 HOH HOH . G 4 HOH B 32 232 95 HOH HOH . G 4 HOH B 33 233 28 HOH HOH . G 4 HOH B 34 234 79 HOH HOH . G 4 HOH B 35 235 94 HOH HOH . G 4 HOH B 36 236 67 HOH HOH . G 4 HOH B 37 237 87 HOH HOH . G 4 HOH B 38 238 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -18.765 -23.338 -9.949 1 34.17 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . D 3 -17.593 -23.899 -10.592 1 29.95 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . D 3 -19.574 -22.682 -10.974 1 40.5 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . D 3 -19.528 -24.39 -9.297 1 39.37 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . D 3 -18.365 -22.395 -8.903 1 42.16 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 130 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #