data_5EC1 # _model_server_result.job_id wdX0vYMT3Eq-D2XhlV24PA _model_server_result.datetime_utc '2024-12-11 21:51:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ec1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":2008}' # _entry.id 5EC1 # _exptl.entry_id 5EC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EC1 _cell.length_a 155.6 _cell.length_b 155.6 _cell.length_c 75.64 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 2 A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 3 A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_355 -x-2,-y,z -1 0 0 0 -1 0 0 0 1 -311.2 0 0 3 'crystal symmetry operation' 3_465 -y-1,x+1,z 0 -1 0 1 0 0 0 0 1 -155.6 155.6 0 4 'crystal symmetry operation' 4_445 y-1,-x-1,z 0 1 0 -1 0 0 0 0 1 -155.6 -155.6 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N ? 6 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 145 A CYS 145 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 C C THR 75 C THR 75 1_555 C OE LHV 76 C LHV 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 C C LHV 76 C LHV 76 1_555 C N GLY 77 C GLY 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 C O THR 75 C THR 75 1_555 H K K . C K 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.213 ? metalc ? metalc2 C OG1 THR 75 C THR 75 1_555 H K K . C K 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc3 C O THR 75 C THR 75 1_555 H K K . C K 2005 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 3.213 ? metalc ? metalc4 C OG1 THR 75 C THR 75 1_555 H K K . C K 2005 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc5 C O LHV 76 C LHV 76 1_555 G K K . C K 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc6 C O LHV 76 C LHV 76 1_555 G K K . C K 2004 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc7 C O GLY 77 C GLY 77 1_555 F K K . C K 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.106 ? metalc ? metalc8 C O GLY 77 C GLY 77 1_555 F K K . C K 2003 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 3.106 ? metalc ? metalc9 C O GLY 77 C GLY 77 1_555 G K K . C K 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? metalc ? metalc10 C O GLY 77 C GLY 77 1_555 G K K . C K 2004 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? metalc ? metalc11 C O TYR 78 C TYR 78 1_555 F K K . C K 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc12 C O TYR 78 C TYR 78 1_555 F K K . C K 2003 3_465 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc13 K K K . C K 2008 1_555 N O HOH . C HOH 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.254 ? metalc ? metalc14 K K K . C K 2008 1_555 N O HOH . C HOH 2105 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 3.254 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EC1 _atom_sites.fract_transf_matrix[1][1] 0.006427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 F09 C 1 2001 2001 F09 F09 . E 5 DGA C 1 2002 1001 DGA DGA . F 6 K C 1 2003 1 K K . G 6 K C 1 2004 2 K K . H 6 K C 1 2005 3 K K . I 6 K C 1 2006 5 K K . J 6 K C 1 2007 6 K K . K 6 K C 1 2008 7 K K . L 7 HOH A 1 301 11 HOH HOH . L 7 HOH A 2 302 20 HOH HOH . M 7 HOH B 1 301 1 HOH HOH . M 7 HOH B 2 302 25 HOH HOH . M 7 HOH B 3 303 21 HOH HOH . M 7 HOH B 4 304 22 HOH HOH . M 7 HOH B 5 305 5 HOH HOH . M 7 HOH B 6 306 18 HOH HOH . M 7 HOH B 7 307 4 HOH HOH . M 7 HOH B 8 308 24 HOH HOH . M 7 HOH B 9 309 23 HOH HOH . N 7 HOH C 1 2101 29 HOH HOH . N 7 HOH C 2 2102 3 HOH HOH . N 7 HOH C 3 2103 10 HOH HOH . N 7 HOH C 4 2104 28 HOH HOH . N 7 HOH C 5 2105 27 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 6 _atom_site.Cartn_x -155.6 _atom_site.Cartn_y 0 _atom_site.Cartn_z 22.385 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 2008 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #