data_5ECC # _model_server_result.job_id 7porMEHRGUPI1NsjDiSiqg _model_server_result.datetime_utc '2024-11-14 04:44:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ecc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":206}' # _entry.id 5ECC # _exptl.entry_id 5ECC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ECC _cell.length_a 76.199 _cell.length_b 76.199 _cell.length_c 113.784 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ECC _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_674 x-y+1,-y+2,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 131.980539 -37.928 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 L N N ? 5 M N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 105 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 104 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id M _struct_conn.ptnr2_label_atom_id CA _struct_conn.ptnr2_label_comp_id CA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CA _struct_conn.ptnr2_auth_seq_id 206 _struct_conn.ptnr2_symmetry 5_674 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.989 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ECC _atom_sites.fract_transf_matrix[1][1] 0.013124 _atom_sites.fract_transf_matrix[1][2] 0.007577 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 201 207 NAP NAP . D 3 6DR A 1 202 1 6DR DRG . E 3 6DR A 1 203 2 6DR DRG . F 4 GOL A 1 204 221 GOL GOL . G 5 CA A 1 205 3 CA CA . H 2 NAP B 1 201 208 NAP NAP . I 3 6DR B 1 202 3 6DR DRG . J 3 6DR B 1 203 4 6DR DRG . K 4 GOL B 1 204 222 GOL GOL . L 5 CA B 1 205 4 CA CA . M 5 CA B 1 206 5 CA CA . N 6 HOH A 1 301 141 HOH HOH . N 6 HOH A 2 302 122 HOH HOH . N 6 HOH A 3 303 67 HOH HOH . N 6 HOH A 4 304 163 HOH HOH . N 6 HOH A 5 305 138 HOH HOH . N 6 HOH A 6 306 43 HOH HOH . N 6 HOH A 7 307 123 HOH HOH . N 6 HOH A 8 308 137 HOH HOH . N 6 HOH A 9 309 173 HOH HOH . N 6 HOH A 10 310 38 HOH HOH . N 6 HOH A 11 311 140 HOH HOH . N 6 HOH A 12 312 5 HOH HOH . N 6 HOH A 13 313 161 HOH HOH . N 6 HOH A 14 314 31 HOH HOH . N 6 HOH A 15 315 75 HOH HOH . N 6 HOH A 16 316 12 HOH HOH . N 6 HOH A 17 317 144 HOH HOH . N 6 HOH A 18 318 58 HOH HOH . N 6 HOH A 19 319 50 HOH HOH . N 6 HOH A 20 320 168 HOH HOH . N 6 HOH A 21 321 167 HOH HOH . N 6 HOH A 22 322 33 HOH HOH . N 6 HOH A 23 323 45 HOH HOH . N 6 HOH A 24 324 59 HOH HOH . N 6 HOH A 25 325 27 HOH HOH . N 6 HOH A 26 326 62 HOH HOH . N 6 HOH A 27 327 16 HOH HOH . N 6 HOH A 28 328 32 HOH HOH . N 6 HOH A 29 329 142 HOH HOH . N 6 HOH A 30 330 47 HOH HOH . N 6 HOH A 31 331 64 HOH HOH . N 6 HOH A 32 332 14 HOH HOH . N 6 HOH A 33 333 1 HOH HOH . N 6 HOH A 34 334 3 HOH HOH . N 6 HOH A 35 335 36 HOH HOH . N 6 HOH A 36 336 10 HOH HOH . N 6 HOH A 37 337 82 HOH HOH . N 6 HOH A 38 338 20 HOH HOH . N 6 HOH A 39 339 39 HOH HOH . N 6 HOH A 40 340 78 HOH HOH . N 6 HOH A 41 341 145 HOH HOH . N 6 HOH A 42 342 54 HOH HOH . N 6 HOH A 43 343 26 HOH HOH . N 6 HOH A 44 344 95 HOH HOH . N 6 HOH A 45 345 83 HOH HOH . N 6 HOH A 46 346 110 HOH HOH . N 6 HOH A 47 347 135 HOH HOH . N 6 HOH A 48 348 44 HOH HOH . N 6 HOH A 49 349 9 HOH HOH . N 6 HOH A 50 350 55 HOH HOH . N 6 HOH A 51 351 162 HOH HOH . N 6 HOH A 52 352 170 HOH HOH . N 6 HOH A 53 353 174 HOH HOH . N 6 HOH A 54 354 79 HOH HOH . N 6 HOH A 55 355 109 HOH HOH . N 6 HOH A 56 356 19 HOH HOH . N 6 HOH A 57 357 34 HOH HOH . N 6 HOH A 58 358 81 HOH HOH . N 6 HOH A 59 359 52 HOH HOH . N 6 HOH A 60 360 24 HOH HOH . N 6 HOH A 61 361 17 HOH HOH . N 6 HOH A 62 362 112 HOH HOH . N 6 HOH A 63 363 80 HOH HOH . N 6 HOH A 64 364 63 HOH HOH . N 6 HOH A 65 365 111 HOH HOH . N 6 HOH A 66 366 143 HOH HOH . N 6 HOH A 67 367 103 HOH HOH . N 6 HOH A 68 368 133 HOH HOH . N 6 HOH A 69 369 108 HOH HOH . N 6 HOH A 70 370 136 HOH HOH . N 6 HOH A 71 371 66 HOH HOH . N 6 HOH A 72 372 42 HOH HOH . N 6 HOH A 73 373 86 HOH HOH . O 6 HOH B 1 301 105 HOH HOH . O 6 HOH B 2 302 113 HOH HOH . O 6 HOH B 3 303 93 HOH HOH . O 6 HOH B 4 304 116 HOH HOH . O 6 HOH B 5 305 100 HOH HOH . O 6 HOH B 6 306 150 HOH HOH . O 6 HOH B 7 307 96 HOH HOH . O 6 HOH B 8 308 41 HOH HOH . O 6 HOH B 9 309 165 HOH HOH . O 6 HOH B 10 310 29 HOH HOH . O 6 HOH B 11 311 157 HOH HOH . O 6 HOH B 12 312 71 HOH HOH . O 6 HOH B 13 313 127 HOH HOH . O 6 HOH B 14 314 125 HOH HOH . O 6 HOH B 15 315 169 HOH HOH . O 6 HOH B 16 316 107 HOH HOH . O 6 HOH B 17 317 120 HOH HOH . O 6 HOH B 18 318 40 HOH HOH . O 6 HOH B 19 319 156 HOH HOH . O 6 HOH B 20 320 98 HOH HOH . O 6 HOH B 21 321 146 HOH HOH . O 6 HOH B 22 322 22 HOH HOH . O 6 HOH B 23 323 160 HOH HOH . O 6 HOH B 24 324 18 HOH HOH . O 6 HOH B 25 325 175 HOH HOH . O 6 HOH B 26 326 73 HOH HOH . O 6 HOH B 27 327 148 HOH HOH . O 6 HOH B 28 328 30 HOH HOH . O 6 HOH B 29 329 49 HOH HOH . O 6 HOH B 30 330 8 HOH HOH . O 6 HOH B 31 331 7 HOH HOH . O 6 HOH B 32 332 128 HOH HOH . O 6 HOH B 33 333 102 HOH HOH . O 6 HOH B 34 334 159 HOH HOH . O 6 HOH B 35 335 132 HOH HOH . O 6 HOH B 36 336 23 HOH HOH . O 6 HOH B 37 337 2 HOH HOH . O 6 HOH B 38 338 74 HOH HOH . O 6 HOH B 39 339 15 HOH HOH . O 6 HOH B 40 340 91 HOH HOH . O 6 HOH B 41 341 90 HOH HOH . O 6 HOH B 42 342 114 HOH HOH . O 6 HOH B 43 343 85 HOH HOH . O 6 HOH B 44 344 69 HOH HOH . O 6 HOH B 45 345 21 HOH HOH . O 6 HOH B 46 346 121 HOH HOH . O 6 HOH B 47 347 126 HOH HOH . O 6 HOH B 48 348 56 HOH HOH . O 6 HOH B 49 349 68 HOH HOH . O 6 HOH B 50 350 88 HOH HOH . O 6 HOH B 51 351 171 HOH HOH . O 6 HOH B 52 352 172 HOH HOH . O 6 HOH B 53 353 35 HOH HOH . O 6 HOH B 54 354 13 HOH HOH . O 6 HOH B 55 355 11 HOH HOH . O 6 HOH B 56 356 70 HOH HOH . O 6 HOH B 57 357 153 HOH HOH . O 6 HOH B 58 358 115 HOH HOH . O 6 HOH B 59 359 57 HOH HOH . O 6 HOH B 60 360 92 HOH HOH . O 6 HOH B 61 361 25 HOH HOH . O 6 HOH B 62 362 28 HOH HOH . O 6 HOH B 63 363 37 HOH HOH . O 6 HOH B 64 364 53 HOH HOH . O 6 HOH B 65 365 94 HOH HOH . O 6 HOH B 66 366 4 HOH HOH . O 6 HOH B 67 367 130 HOH HOH . O 6 HOH B 68 368 61 HOH HOH . O 6 HOH B 69 369 46 HOH HOH . O 6 HOH B 70 370 131 HOH HOH . O 6 HOH B 71 371 6 HOH HOH . O 6 HOH B 72 372 106 HOH HOH . O 6 HOH B 73 373 76 HOH HOH . O 6 HOH B 74 374 152 HOH HOH . O 6 HOH B 75 375 151 HOH HOH . O 6 HOH B 76 376 99 HOH HOH . O 6 HOH B 77 377 72 HOH HOH . O 6 HOH B 78 378 97 HOH HOH . O 6 HOH B 79 379 117 HOH HOH . O 6 HOH B 80 380 101 HOH HOH . O 6 HOH B 81 381 154 HOH HOH . O 6 HOH B 82 382 166 HOH HOH . O 6 HOH B 83 383 77 HOH HOH . O 6 HOH B 84 384 147 HOH HOH . O 6 HOH B 85 385 48 HOH HOH . O 6 HOH B 86 386 89 HOH HOH . O 6 HOH B 87 387 124 HOH HOH . O 6 HOH B 88 388 129 HOH HOH . O 6 HOH B 89 389 155 HOH HOH . O 6 HOH B 90 390 149 HOH HOH . O 6 HOH B 91 391 164 HOH HOH . O 6 HOH B 92 392 139 HOH HOH . O 6 HOH B 93 393 118 HOH HOH . O 6 HOH B 94 394 104 HOH HOH . O 6 HOH B 95 395 51 HOH HOH . O 6 HOH B 96 396 158 HOH HOH . O 6 HOH B 97 397 65 HOH HOH . O 6 HOH B 98 398 60 HOH HOH . O 6 HOH B 99 399 134 HOH HOH . O 6 HOH B 100 400 84 HOH HOH . O 6 HOH B 101 401 119 HOH HOH . O 6 HOH B 102 402 87 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 5 _atom_site.Cartn_x 10.682 _atom_site.Cartn_y 64.538 _atom_site.Cartn_z -12.68 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 206 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #