data_5EDT
#
_model_server_result.job_id            XodzwRxCkbY5bq9CsXsgUg 
_model_server_result.datetime_utc      '2024-11-14 16:23:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5edt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":408}' 
#
_entry.id    5EDT 
#
_exptl.entry_id    5EDT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5EDT 
_cell.length_a            77 
_cell.length_b            77 
_cell.length_c            263 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EDT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 344 A CYS 345 1_555 B FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc2 B FE HEM . A HEM 401 1_555 N O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 390 n n 
S O2 SO4 doub 391 n n 
S O3 SO4 sing 392 n n 
S O4 SO4 sing 393 n n 
#
_atom_sites.entry_id                     5EDT 
_atom_sites.fract_transf_matrix[1][1]    0.012987 
_atom_sites.fract_transf_matrix[1][2]    0.007498 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014996 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003802 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 401 397 HEM HEM . 
C 3 5MK A 1 402 398 5MK DRG . 
D 4 SO4 A 1 403 399 SO4 SO4 . 
E 4 SO4 A 1 404 400 SO4 SO4 . 
F 4 SO4 A 1 405 401 SO4 SO4 . 
G 4 SO4 A 1 406 402 SO4 SO4 . 
H 4 SO4 A 1 407 403 SO4 SO4 . 
I 4 SO4 A 1 408 404 SO4 SO4 . 
J 4 SO4 A 1 409 405 SO4 SO4 . 
K 4 SO4 A 1 410 406 SO4 SO4 . 
L 4 SO4 A 1 411 407 SO4 SO4 . 
M 4 SO4 A 1 412 408 SO4 SO4 . 
N 5 HOH A 1 501 502 HOH HOH . 
N 5 HOH A 2 502 471 HOH HOH . 
N 5 HOH A 3 503 415 HOH HOH . 
N 5 HOH A 4 504 440 HOH HOH . 
N 5 HOH A 5 505 538 HOH HOH . 
N 5 HOH A 6 506 531 HOH HOH . 
N 5 HOH A 7 507 564 HOH HOH . 
N 5 HOH A 8 508 617 HOH HOH . 
N 5 HOH A 9 509 620 HOH HOH . 
N 5 HOH A 10 510 561 HOH HOH . 
N 5 HOH A 11 511 499 HOH HOH . 
N 5 HOH A 12 512 597 HOH HOH . 
N 5 HOH A 13 513 521 HOH HOH . 
N 5 HOH A 14 514 527 HOH HOH . 
N 5 HOH A 15 515 543 HOH HOH . 
N 5 HOH A 16 516 616 HOH HOH . 
N 5 HOH A 17 517 602 HOH HOH . 
N 5 HOH A 18 518 428 HOH HOH . 
N 5 HOH A 19 519 515 HOH HOH . 
N 5 HOH A 20 520 517 HOH HOH . 
N 5 HOH A 21 521 493 HOH HOH . 
N 5 HOH A 22 522 479 HOH HOH . 
N 5 HOH A 23 523 552 HOH HOH . 
N 5 HOH A 24 524 418 HOH HOH . 
N 5 HOH A 25 525 596 HOH HOH . 
N 5 HOH A 26 526 537 HOH HOH . 
N 5 HOH A 27 527 568 HOH HOH . 
N 5 HOH A 28 528 447 HOH HOH . 
N 5 HOH A 29 529 579 HOH HOH . 
N 5 HOH A 30 530 430 HOH HOH . 
N 5 HOH A 31 531 546 HOH HOH . 
N 5 HOH A 32 532 481 HOH HOH . 
N 5 HOH A 33 533 478 HOH HOH . 
N 5 HOH A 34 534 605 HOH HOH . 
N 5 HOH A 35 535 509 HOH HOH . 
N 5 HOH A 36 536 508 HOH HOH . 
N 5 HOH A 37 537 476 HOH HOH . 
N 5 HOH A 38 538 421 HOH HOH . 
N 5 HOH A 39 539 485 HOH HOH . 
N 5 HOH A 40 540 497 HOH HOH . 
N 5 HOH A 41 541 548 HOH HOH . 
N 5 HOH A 42 542 569 HOH HOH . 
N 5 HOH A 43 543 459 HOH HOH . 
N 5 HOH A 44 544 606 HOH HOH . 
N 5 HOH A 45 545 494 HOH HOH . 
N 5 HOH A 46 546 514 HOH HOH . 
N 5 HOH A 47 547 413 HOH HOH . 
N 5 HOH A 48 548 600 HOH HOH . 
N 5 HOH A 49 549 491 HOH HOH . 
N 5 HOH A 50 550 492 HOH HOH . 
N 5 HOH A 51 551 598 HOH HOH . 
N 5 HOH A 52 552 465 HOH HOH . 
N 5 HOH A 53 553 575 HOH HOH . 
N 5 HOH A 54 554 510 HOH HOH . 
N 5 HOH A 55 555 522 HOH HOH . 
N 5 HOH A 56 556 536 HOH HOH . 
N 5 HOH A 57 557 565 HOH HOH . 
N 5 HOH A 58 558 504 HOH HOH . 
N 5 HOH A 59 559 489 HOH HOH . 
N 5 HOH A 60 560 482 HOH HOH . 
N 5 HOH A 61 561 528 HOH HOH . 
N 5 HOH A 62 562 507 HOH HOH . 
N 5 HOH A 63 563 623 HOH HOH . 
N 5 HOH A 64 564 618 HOH HOH . 
N 5 HOH A 65 565 604 HOH HOH . 
N 5 HOH A 66 566 516 HOH HOH . 
N 5 HOH A 67 567 512 HOH HOH . 
N 5 HOH A 68 568 410 HOH HOH . 
N 5 HOH A 69 569 539 HOH HOH . 
N 5 HOH A 70 570 557 HOH HOH . 
N 5 HOH A 71 571 503 HOH HOH . 
N 5 HOH A 72 572 524 HOH HOH . 
N 5 HOH A 73 573 590 HOH HOH . 
N 5 HOH A 74 574 612 HOH HOH . 
N 5 HOH A 75 575 488 HOH HOH . 
N 5 HOH A 76 576 480 HOH HOH . 
N 5 HOH A 77 577 608 HOH HOH . 
N 5 HOH A 78 578 566 HOH HOH . 
N 5 HOH A 79 579 544 HOH HOH . 
N 5 HOH A 80 580 609 HOH HOH . 
N 5 HOH A 81 581 484 HOH HOH . 
N 5 HOH A 82 582 580 HOH HOH . 
N 5 HOH A 83 583 533 HOH HOH . 
N 5 HOH A 84 584 519 HOH HOH . 
N 5 HOH A 85 585 490 HOH HOH . 
N 5 HOH A 86 586 523 HOH HOH . 
N 5 HOH A 87 587 513 HOH HOH . 
N 5 HOH A 88 588 614 HOH HOH . 
N 5 HOH A 89 589 525 HOH HOH . 
N 5 HOH A 90 590 558 HOH HOH . 
N 5 HOH A 91 591 555 HOH HOH . 
N 5 HOH A 92 592 559 HOH HOH . 
N 5 HOH A 93 593 626 HOH HOH . 
N 5 HOH A 94 594 530 HOH HOH . 
N 5 HOH A 95 595 603 HOH HOH . 
N 5 HOH A 96 596 591 HOH HOH . 
N 5 HOH A 97 597 446 HOH HOH . 
N 5 HOH A 98 598 532 HOH HOH . 
N 5 HOH A 99 599 551 HOH HOH . 
N 5 HOH A 100 600 411 HOH HOH . 
N 5 HOH A 101 601 473 HOH HOH . 
N 5 HOH A 102 602 535 HOH HOH . 
N 5 HOH A 103 603 477 HOH HOH . 
N 5 HOH A 104 604 549 HOH HOH . 
N 5 HOH A 105 605 542 HOH HOH . 
N 5 HOH A 106 606 419 HOH HOH . 
N 5 HOH A 107 607 422 HOH HOH . 
N 5 HOH A 108 608 607 HOH HOH . 
N 5 HOH A 109 609 520 HOH HOH . 
N 5 HOH A 110 610 570 HOH HOH . 
N 5 HOH A 111 611 573 HOH HOH . 
N 5 HOH A 112 612 545 HOH HOH . 
N 5 HOH A 113 613 621 HOH HOH . 
N 5 HOH A 114 614 486 HOH HOH . 
N 5 HOH A 115 615 496 HOH HOH . 
N 5 HOH A 116 616 529 HOH HOH . 
N 5 HOH A 117 617 495 HOH HOH . 
N 5 HOH A 118 618 554 HOH HOH . 
N 5 HOH A 119 619 560 HOH HOH . 
N 5 HOH A 120 620 452 HOH HOH . 
N 5 HOH A 121 621 563 HOH HOH . 
N 5 HOH A 122 622 615 HOH HOH . 
N 5 HOH A 123 623 412 HOH HOH . 
N 5 HOH A 124 624 505 HOH HOH . 
N 5 HOH A 125 625 581 HOH HOH . 
N 5 HOH A 126 626 472 HOH HOH . 
N 5 HOH A 127 627 601 HOH HOH . 
N 5 HOH A 128 628 589 HOH HOH . 
N 5 HOH A 129 629 619 HOH HOH . 
N 5 HOH A 130 630 461 HOH HOH . 
N 5 HOH A 131 631 511 HOH HOH . 
N 5 HOH A 132 632 501 HOH HOH . 
N 5 HOH A 133 633 624 HOH HOH . 
N 5 HOH A 134 634 547 HOH HOH . 
N 5 HOH A 135 635 550 HOH HOH . 
N 5 HOH A 136 636 434 HOH HOH . 
N 5 HOH A 137 637 599 HOH HOH . 
N 5 HOH A 138 638 409 HOH HOH . 
N 5 HOH A 139 639 584 HOH HOH . 
N 5 HOH A 140 640 541 HOH HOH . 
N 5 HOH A 141 641 487 HOH HOH . 
N 5 HOH A 142 642 455 HOH HOH . 
N 5 HOH A 143 643 506 HOH HOH . 
N 5 HOH A 144 644 424 HOH HOH . 
N 5 HOH A 145 645 458 HOH HOH . 
N 5 HOH A 146 646 498 HOH HOH . 
N 5 HOH A 147 647 449 HOH HOH . 
N 5 HOH A 148 648 475 HOH HOH . 
N 5 HOH A 149 649 610 HOH HOH . 
N 5 HOH A 150 650 426 HOH HOH . 
N 5 HOH A 151 651 432 HOH HOH . 
N 5 HOH A 152 652 500 HOH HOH . 
N 5 HOH A 153 653 518 HOH HOH . 
N 5 HOH A 154 654 483 HOH HOH . 
N 5 HOH A 155 655 588 HOH HOH . 
N 5 HOH A 156 656 585 HOH HOH . 
N 5 HOH A 157 657 576 HOH HOH . 
N 5 HOH A 158 658 437 HOH HOH . 
N 5 HOH A 159 659 578 HOH HOH . 
N 5 HOH A 160 660 540 HOH HOH . 
N 5 HOH A 161 661 567 HOH HOH . 
N 5 HOH A 162 662 463 HOH HOH . 
N 5 HOH A 163 663 469 HOH HOH . 
N 5 HOH A 164 664 464 HOH HOH . 
N 5 HOH A 165 665 574 HOH HOH . 
N 5 HOH A 166 666 613 HOH HOH . 
N 5 HOH A 167 667 556 HOH HOH . 
N 5 HOH A 168 668 429 HOH HOH . 
N 5 HOH A 169 669 467 HOH HOH . 
N 5 HOH A 170 670 420 HOH HOH . 
N 5 HOH A 171 671 438 HOH HOH . 
N 5 HOH A 172 672 417 HOH HOH . 
N 5 HOH A 173 673 587 HOH HOH . 
N 5 HOH A 174 674 416 HOH HOH . 
N 5 HOH A 175 675 468 HOH HOH . 
N 5 HOH A 176 676 456 HOH HOH . 
N 5 HOH A 177 677 431 HOH HOH . 
N 5 HOH A 178 678 451 HOH HOH . 
N 5 HOH A 179 679 444 HOH HOH . 
N 5 HOH A 180 680 586 HOH HOH . 
N 5 HOH A 181 681 595 HOH HOH . 
N 5 HOH A 182 682 442 HOH HOH . 
N 5 HOH A 183 683 453 HOH HOH . 
N 5 HOH A 184 684 423 HOH HOH . 
N 5 HOH A 185 685 470 HOH HOH . 
N 5 HOH A 186 686 433 HOH HOH . 
N 5 HOH A 187 687 435 HOH HOH . 
N 5 HOH A 188 688 553 HOH HOH . 
N 5 HOH A 189 689 611 HOH HOH . 
N 5 HOH A 190 690 441 HOH HOH . 
N 5 HOH A 191 691 448 HOH HOH . 
N 5 HOH A 192 692 443 HOH HOH . 
N 5 HOH A 193 693 593 HOH HOH . 
N 5 HOH A 194 694 562 HOH HOH . 
N 5 HOH A 195 695 439 HOH HOH . 
N 5 HOH A 196 696 462 HOH HOH . 
N 5 HOH A 197 697 577 HOH HOH . 
N 5 HOH A 198 698 454 HOH HOH . 
N 5 HOH A 199 699 427 HOH HOH . 
N 5 HOH A 200 700 450 HOH HOH . 
N 5 HOH A 201 701 474 HOH HOH . 
N 5 HOH A 202 702 414 HOH HOH . 
N 5 HOH A 203 703 445 HOH HOH . 
N 5 HOH A 204 704 592 HOH HOH . 
N 5 HOH A 205 705 582 HOH HOH . 
N 5 HOH A 206 706 460 HOH HOH . 
N 5 HOH A 207 707 622 HOH HOH . 
N 5 HOH A 208 708 466 HOH HOH . 
N 5 HOH A 209 709 583 HOH HOH . 
N 5 HOH A 210 710 526 HOH HOH . 
N 5 HOH A 211 711 457 HOH HOH . 
N 5 HOH A 212 712 625 HOH HOH . 
N 5 HOH A 213 713 571 HOH HOH . 
N 5 HOH A 214 714 534 HOH HOH . 
N 5 HOH A 215 715 436 HOH HOH . 
N 5 HOH A 216 716 425 HOH HOH . 
N 5 HOH A 217 717 594 HOH HOH . 
N 5 HOH A 218 718 572 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . I 4 6.079 25.876 30.564 1 79.66 ? S SO4 408 A 1 
HETATM 2 O O1 SO4 . . . I 4 7.486 25.388 30.64 1 78.21 ? O1 SO4 408 A 1 
HETATM 3 O O2 SO4 . . . I 4 5.488 25.578 29.23 1 69.74 ? O2 SO4 408 A 1 
HETATM 4 O O3 SO4 . . . I 4 5.276 25.17 31.586 1 91.1 ? O3 SO4 408 A 1 
HETATM 5 O O4 SO4 . . . I 4 6.038 27.327 30.91 1 78.17 ? O4 SO4 408 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#