data_5EE5 # _model_server_result.job_id hdjjBSaudeDZlwzi7nwGBw _model_server_result.datetime_utc '2024-11-22 18:05:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ee5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":310}' # _entry.id 5EE5 # _exptl.entry_id 5EE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.98 _cell.angle_gamma 90 _cell.entry_id 5EE5 _cell.length_a 84.166 _cell.length_b 50.727 _cell.length_c 103.837 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N ? 5 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 178 A ALA 194 1_555 A N ALY 179 A ALY 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale2 A C ALY 179 A ALY 195 1_555 A N ALA 180 A ALA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? metalc ? metalc1 A OE2 GLU 50 A GLU 47 1_555 F NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? metalc ? metalc2 F NA NA . A NA 304 1_555 FA O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc3 B OG1 THR 21 B THR 31 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc4 B OG1 THR 21 B THR 31 1_555 T MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc5 B OG1 THR 38 B THR 48 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc6 B OG1 THR 38 B THR 48 1_555 T MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc7 B O LEU 51 B LEU 61 1_555 S MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 B OD2 ASP 83 B ASP 93 1_555 R MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc9 B O CYS 85 B CYS 95 1_555 AA NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.13 ? metalc ? metalc10 B OD2 ASP 86 B ASP 96 1_555 R MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc11 B OD2 ASP 140 B ASP 150 1_555 V NA NA . B NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc12 B OE2 GLU 161 B GLU 171 1_555 BA NA NA . B NA 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc13 P O1G GTP . B GTP 201 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc14 P O1B GTP . B GTP 201 1_555 Q MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc15 P O1G GTP . B GTP 201 1_555 T MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc16 P O1B GTP . B GTP 201 1_555 T MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc17 P O2A GTP . B GTP 201 1_555 T MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EE5 _atom_sites.fract_transf_matrix[1][1] 0.011881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004795 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 301 13 NA NA . D 3 NA A 1 302 15 NA NA . E 3 NA A 1 303 17 NA NA . F 3 NA A 1 304 21 NA NA . G 3 NA A 1 305 23 NA NA . H 3 NA A 1 306 25 NA NA . I 4 GOL A 1 307 3 GOL GOL . J 5 CL A 1 308 1 CL CL . K 5 CL A 1 309 2 CL CL . L 5 CL A 1 310 3 CL CL . M 5 CL A 1 311 4 CL CL . N 5 CL A 1 312 5 CL CL . O 5 CL A 1 313 6 CL CL . P 6 GTP B 1 201 1 GTP GTP . Q 7 MG B 1 202 1 MG MG . R 7 MG B 1 203 2 MG MG . S 7 MG B 1 204 3 MG MG . T 7 MG B 1 205 4 MG MG . U 3 NA B 1 206 9 NA NA . V 3 NA B 1 207 10 NA NA . W 3 NA B 1 208 12 NA NA . X 3 NA B 1 209 16 NA NA . Y 3 NA B 1 210 18 NA NA . Z 3 NA B 1 211 19 NA NA . AA 3 NA B 1 212 20 NA NA . BA 3 NA B 1 213 24 NA NA . CA 4 GOL B 1 214 1 GOL GOL . DA 5 CL B 1 215 7 CL CL . EA 8 ACT B 1 216 1 ACT ACT . FA 9 HOH A 1 401 104 HOH HOH . FA 9 HOH A 2 402 32 HOH HOH . FA 9 HOH A 3 403 62 HOH HOH . FA 9 HOH A 4 404 105 HOH HOH . FA 9 HOH A 5 405 122 HOH HOH . FA 9 HOH A 6 406 17 HOH HOH . FA 9 HOH A 7 407 29 HOH HOH . FA 9 HOH A 8 408 125 HOH HOH . FA 9 HOH A 9 409 76 HOH HOH . FA 9 HOH A 10 410 121 HOH HOH . FA 9 HOH A 11 411 124 HOH HOH . FA 9 HOH A 12 412 60 HOH HOH . FA 9 HOH A 13 413 85 HOH HOH . FA 9 HOH A 14 414 86 HOH HOH . FA 9 HOH A 15 415 50 HOH HOH . FA 9 HOH A 16 416 73 HOH HOH . FA 9 HOH A 17 417 95 HOH HOH . FA 9 HOH A 18 418 103 HOH HOH . FA 9 HOH A 19 419 97 HOH HOH . FA 9 HOH A 20 420 63 HOH HOH . FA 9 HOH A 21 421 6 HOH HOH . GA 9 HOH B 1 301 114 HOH HOH . GA 9 HOH B 2 302 31 HOH HOH . GA 9 HOH B 3 303 15 HOH HOH . GA 9 HOH B 4 304 40 HOH HOH . GA 9 HOH B 5 305 26 HOH HOH . GA 9 HOH B 6 306 56 HOH HOH . GA 9 HOH B 7 307 49 HOH HOH . GA 9 HOH B 8 308 111 HOH HOH . GA 9 HOH B 9 309 110 HOH HOH . GA 9 HOH B 10 310 113 HOH HOH . GA 9 HOH B 11 311 117 HOH HOH . GA 9 HOH B 12 312 21 HOH HOH . GA 9 HOH B 13 313 112 HOH HOH . GA 9 HOH B 14 314 27 HOH HOH . GA 9 HOH B 15 315 33 HOH HOH . GA 9 HOH B 16 316 100 HOH HOH . GA 9 HOH B 17 317 65 HOH HOH . GA 9 HOH B 18 318 96 HOH HOH . GA 9 HOH B 19 319 123 HOH HOH . GA 9 HOH B 20 320 116 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 13.767 _atom_site.Cartn_y -36.742 _atom_site.Cartn_z -15.691 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 97.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 310 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #