data_5EEQ # _model_server_result.job_id cTHsycd2URlbWIDXg8Eifg _model_server_result.datetime_utc '2024-12-23 12:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eeq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5EEQ # _exptl.entry_id 5EEQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.5 _cell.angle_gamma 90 _cell.entry_id 5EEQ _cell.length_a 37.081 _cell.length_b 63.811 _cell.length_c 52.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C OG SER 1 L SER 1 1_555 C C4 73C 8 L 73C 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 C N SER 1 L SER 1 1_555 C C09 48V 11 L 48V 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale3 C C ASN 7 L ASN 7 1_555 C N 73C 8 L 73C 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 C C 73C 8 L 73C 8 1_555 C N PHE 9 L PHE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 C C PRO 10 L PRO 10 1_555 C N01 48V 11 L 48V 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 D OG SER 1 M SER 1 1_555 D C4 73C 8 M 73C 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale7 D N SER 1 M SER 1 1_555 D C09 48V 11 M 48V 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale8 D C ASN 7 M ASN 7 1_555 D N 73C 8 M 73C 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale9 D C 73C 8 M 73C 8 1_555 D N PHE 9 M PHE 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 D C PRO 10 M PRO 10 1_555 D N01 48V 11 M 48V 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 305 n n P O2 PO4 sing 306 n n P O3 PO4 sing 307 n n P O4 PO4 sing 308 n n # _atom_sites.entry_id 5EEQ _atom_sites.fract_transf_matrix[1][1] 0.026968 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001177 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019234 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 A 1 601 2 PO4 PO4 . F 3 PO4 B 1 601 1 PO4 PO4 . G 4 HOH A 1 701 84 HOH HOH . G 4 HOH A 2 702 178 HOH HOH . G 4 HOH A 3 703 51 HOH HOH . G 4 HOH A 4 704 104 HOH HOH . G 4 HOH A 5 705 102 HOH HOH . G 4 HOH A 6 706 40 HOH HOH . G 4 HOH A 7 707 118 HOH HOH . G 4 HOH A 8 708 107 HOH HOH . G 4 HOH A 9 709 11 HOH HOH . G 4 HOH A 10 710 101 HOH HOH . G 4 HOH A 11 711 23 HOH HOH . G 4 HOH A 12 712 177 HOH HOH . G 4 HOH A 13 713 46 HOH HOH . G 4 HOH A 14 714 18 HOH HOH . G 4 HOH A 15 715 1 HOH HOH . G 4 HOH A 16 716 59 HOH HOH . G 4 HOH A 17 717 36 HOH HOH . G 4 HOH A 18 718 99 HOH HOH . G 4 HOH A 19 719 113 HOH HOH . G 4 HOH A 20 720 97 HOH HOH . G 4 HOH A 21 721 41 HOH HOH . G 4 HOH A 22 722 26 HOH HOH . G 4 HOH A 23 723 67 HOH HOH . G 4 HOH A 24 724 60 HOH HOH . G 4 HOH A 25 725 119 HOH HOH . G 4 HOH A 26 726 52 HOH HOH . G 4 HOH A 27 727 38 HOH HOH . G 4 HOH A 28 728 81 HOH HOH . G 4 HOH A 29 729 141 HOH HOH . G 4 HOH A 30 730 5 HOH HOH . G 4 HOH A 31 731 6 HOH HOH . G 4 HOH A 32 732 15 HOH HOH . G 4 HOH A 33 733 126 HOH HOH . G 4 HOH A 34 734 4 HOH HOH . G 4 HOH A 35 735 82 HOH HOH . G 4 HOH A 36 736 17 HOH HOH . G 4 HOH A 37 737 48 HOH HOH . G 4 HOH A 38 738 130 HOH HOH . G 4 HOH A 39 739 127 HOH HOH . G 4 HOH A 40 740 136 HOH HOH . G 4 HOH A 41 741 12 HOH HOH . G 4 HOH A 42 742 120 HOH HOH . G 4 HOH A 43 743 35 HOH HOH . G 4 HOH A 44 744 140 HOH HOH . G 4 HOH A 45 745 22 HOH HOH . G 4 HOH A 46 746 155 HOH HOH . G 4 HOH A 47 747 56 HOH HOH . G 4 HOH A 48 748 31 HOH HOH . G 4 HOH A 49 749 10 HOH HOH . G 4 HOH A 50 750 134 HOH HOH . G 4 HOH A 51 751 30 HOH HOH . G 4 HOH A 52 752 182 HOH HOH . G 4 HOH A 53 753 181 HOH HOH . G 4 HOH A 54 754 94 HOH HOH . G 4 HOH A 55 755 157 HOH HOH . G 4 HOH A 56 756 77 HOH HOH . G 4 HOH A 57 757 100 HOH HOH . G 4 HOH A 58 758 172 HOH HOH . G 4 HOH A 59 759 27 HOH HOH . G 4 HOH A 60 760 75 HOH HOH . G 4 HOH A 61 761 111 HOH HOH . G 4 HOH A 62 762 105 HOH HOH . G 4 HOH A 63 763 183 HOH HOH . G 4 HOH A 64 764 174 HOH HOH . G 4 HOH A 65 765 153 HOH HOH . G 4 HOH A 66 766 116 HOH HOH . G 4 HOH A 67 767 128 HOH HOH . G 4 HOH A 68 768 91 HOH HOH . G 4 HOH A 69 769 131 HOH HOH . G 4 HOH A 70 770 112 HOH HOH . G 4 HOH A 71 771 152 HOH HOH . G 4 HOH A 72 772 58 HOH HOH . G 4 HOH A 73 773 29 HOH HOH . G 4 HOH A 74 774 163 HOH HOH . G 4 HOH A 75 775 85 HOH HOH . G 4 HOH A 76 776 180 HOH HOH . G 4 HOH A 77 777 137 HOH HOH . G 4 HOH A 78 778 144 HOH HOH . G 4 HOH A 79 779 45 HOH HOH . G 4 HOH A 80 780 114 HOH HOH . H 4 HOH B 1 701 167 HOH HOH . H 4 HOH B 2 702 65 HOH HOH . H 4 HOH B 3 703 185 HOH HOH . H 4 HOH B 4 704 76 HOH HOH . H 4 HOH B 5 705 64 HOH HOH . H 4 HOH B 6 706 115 HOH HOH . H 4 HOH B 7 707 34 HOH HOH . H 4 HOH B 8 708 24 HOH HOH . H 4 HOH B 9 709 179 HOH HOH . H 4 HOH B 10 710 123 HOH HOH . H 4 HOH B 11 711 96 HOH HOH . H 4 HOH B 12 712 68 HOH HOH . H 4 HOH B 13 713 78 HOH HOH . H 4 HOH B 14 714 37 HOH HOH . H 4 HOH B 15 715 55 HOH HOH . H 4 HOH B 16 716 149 HOH HOH . H 4 HOH B 17 717 3 HOH HOH . H 4 HOH B 18 718 125 HOH HOH . H 4 HOH B 19 719 16 HOH HOH . H 4 HOH B 20 720 54 HOH HOH . H 4 HOH B 21 721 57 HOH HOH . H 4 HOH B 22 722 2 HOH HOH . H 4 HOH B 23 723 13 HOH HOH . H 4 HOH B 24 724 98 HOH HOH . H 4 HOH B 25 725 21 HOH HOH . H 4 HOH B 26 726 49 HOH HOH . H 4 HOH B 27 727 70 HOH HOH . H 4 HOH B 28 728 160 HOH HOH . H 4 HOH B 29 729 86 HOH HOH . H 4 HOH B 30 730 39 HOH HOH . H 4 HOH B 31 731 14 HOH HOH . H 4 HOH B 32 732 9 HOH HOH . H 4 HOH B 33 733 69 HOH HOH . H 4 HOH B 34 734 173 HOH HOH . H 4 HOH B 35 735 53 HOH HOH . H 4 HOH B 36 736 8 HOH HOH . H 4 HOH B 37 737 151 HOH HOH . H 4 HOH B 38 738 28 HOH HOH . H 4 HOH B 39 739 20 HOH HOH . H 4 HOH B 40 740 25 HOH HOH . H 4 HOH B 41 741 33 HOH HOH . H 4 HOH B 42 742 146 HOH HOH . H 4 HOH B 43 743 132 HOH HOH . H 4 HOH B 44 744 19 HOH HOH . H 4 HOH B 45 745 71 HOH HOH . H 4 HOH B 46 746 50 HOH HOH . H 4 HOH B 47 747 74 HOH HOH . H 4 HOH B 48 748 142 HOH HOH . H 4 HOH B 49 749 44 HOH HOH . H 4 HOH B 50 750 79 HOH HOH . H 4 HOH B 51 751 121 HOH HOH . H 4 HOH B 52 752 147 HOH HOH . H 4 HOH B 53 753 61 HOH HOH . H 4 HOH B 54 754 32 HOH HOH . H 4 HOH B 55 755 108 HOH HOH . H 4 HOH B 56 756 95 HOH HOH . H 4 HOH B 57 757 156 HOH HOH . H 4 HOH B 58 758 166 HOH HOH . H 4 HOH B 59 759 135 HOH HOH . H 4 HOH B 60 760 80 HOH HOH . H 4 HOH B 61 761 164 HOH HOH . H 4 HOH B 62 762 47 HOH HOH . H 4 HOH B 63 763 184 HOH HOH . H 4 HOH B 64 764 92 HOH HOH . H 4 HOH B 65 765 168 HOH HOH . H 4 HOH B 66 766 93 HOH HOH . H 4 HOH B 67 767 66 HOH HOH . H 4 HOH B 68 768 150 HOH HOH . H 4 HOH B 69 769 89 HOH HOH . I 4 HOH L 1 101 42 HOH HOH . I 4 HOH L 2 102 87 HOH HOH . I 4 HOH L 3 103 158 HOH HOH . I 4 HOH L 4 104 169 HOH HOH . I 4 HOH L 5 105 117 HOH HOH . I 4 HOH L 6 106 7 HOH HOH . I 4 HOH L 7 107 83 HOH HOH . I 4 HOH L 8 108 73 HOH HOH . I 4 HOH L 9 109 148 HOH HOH . I 4 HOH L 10 110 103 HOH HOH . I 4 HOH L 11 111 133 HOH HOH . I 4 HOH L 12 112 62 HOH HOH . J 4 HOH M 1 101 106 HOH HOH . J 4 HOH M 2 102 63 HOH HOH . J 4 HOH M 3 103 72 HOH HOH . J 4 HOH M 4 104 129 HOH HOH . J 4 HOH M 5 105 122 HOH HOH . J 4 HOH M 6 106 165 HOH HOH . J 4 HOH M 7 107 90 HOH HOH . J 4 HOH M 8 108 161 HOH HOH . J 4 HOH M 9 109 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 3 5.638 33.562 27.029 1 25.48 ? P PO4 601 B 1 HETATM 2 O O1 PO4 . . . F 3 5.097 33.462 25.614 1 27.35 ? O1 PO4 601 B 1 HETATM 3 O O2 PO4 . . . F 3 7.133 33.752 26.959 1 25.45 ? O2 PO4 601 B 1 HETATM 4 O O3 PO4 . . . F 3 5.341 32.295 27.785 1 29.18 ? O3 PO4 601 B 1 HETATM 5 O O4 PO4 . . . F 3 4.995 34.749 27.706 1 31.07 ? O4 PO4 601 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #