data_5EES
#
_model_server_result.job_id            WYXFDSo38z0_ulDjll5ZnA 
_model_server_result.datetime_utc      '2024-12-21 15:05:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ees 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
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_entry.id    5EES 
#
_exptl.entry_id    5EES 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EES 
_cell.length_a            107.969 
_cell.length_b            107.969 
_cell.length_c            172.049 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EES 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 107.969 107.969 0 
3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 107.969 107.969 0 
4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5EES 
_atom_sites.fract_transf_matrix[1][1]    0.009262 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009262 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005812 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 301 1 GOL GOL . 
C 3 NAP A 1 302 1 NAP NAP . 
D 4 SO4 A 1 303 1 SO4 SO4 . 
E 4 SO4 A 1 304 2 SO4 SO4 . 
F 5 HOH A 1 401 110 HOH HOH . 
F 5 HOH A 2 402 90 HOH HOH . 
F 5 HOH A 3 403 1 HOH HOH . 
F 5 HOH A 4 404 91 HOH HOH . 
F 5 HOH A 5 405 67 HOH HOH . 
F 5 HOH A 6 406 39 HOH HOH . 
F 5 HOH A 7 407 5 HOH HOH . 
F 5 HOH A 8 408 83 HOH HOH . 
F 5 HOH A 9 409 56 HOH HOH . 
F 5 HOH A 10 410 94 HOH HOH . 
F 5 HOH A 11 411 11 HOH HOH . 
F 5 HOH A 12 412 72 HOH HOH . 
F 5 HOH A 13 413 30 HOH HOH . 
F 5 HOH A 14 414 7 HOH HOH . 
F 5 HOH A 15 415 42 HOH HOH . 
F 5 HOH A 16 416 60 HOH HOH . 
F 5 HOH A 17 417 22 HOH HOH . 
F 5 HOH A 18 418 14 HOH HOH . 
F 5 HOH A 19 419 12 HOH HOH . 
F 5 HOH A 20 420 13 HOH HOH . 
F 5 HOH A 21 421 101 HOH HOH . 
F 5 HOH A 22 422 93 HOH HOH . 
F 5 HOH A 23 423 78 HOH HOH . 
F 5 HOH A 24 424 8 HOH HOH . 
F 5 HOH A 25 425 17 HOH HOH . 
F 5 HOH A 26 426 53 HOH HOH . 
F 5 HOH A 27 427 29 HOH HOH . 
F 5 HOH A 28 428 31 HOH HOH . 
F 5 HOH A 29 429 26 HOH HOH . 
F 5 HOH A 30 430 116 HOH HOH . 
F 5 HOH A 31 431 44 HOH HOH . 
F 5 HOH A 32 432 55 HOH HOH . 
F 5 HOH A 33 433 81 HOH HOH . 
F 5 HOH A 34 434 2 HOH HOH . 
F 5 HOH A 35 435 121 HOH HOH . 
F 5 HOH A 36 436 77 HOH HOH . 
F 5 HOH A 37 437 63 HOH HOH . 
F 5 HOH A 38 438 24 HOH HOH . 
F 5 HOH A 39 439 19 HOH HOH . 
F 5 HOH A 40 440 9 HOH HOH . 
F 5 HOH A 41 441 111 HOH HOH . 
F 5 HOH A 42 442 28 HOH HOH . 
F 5 HOH A 43 443 120 HOH HOH . 
F 5 HOH A 44 444 92 HOH HOH . 
F 5 HOH A 45 445 61 HOH HOH . 
F 5 HOH A 46 446 68 HOH HOH . 
F 5 HOH A 47 447 23 HOH HOH . 
F 5 HOH A 48 448 10 HOH HOH . 
F 5 HOH A 49 449 88 HOH HOH . 
F 5 HOH A 50 450 109 HOH HOH . 
F 5 HOH A 51 451 6 HOH HOH . 
F 5 HOH A 52 452 43 HOH HOH . 
F 5 HOH A 53 453 79 HOH HOH . 
F 5 HOH A 54 454 16 HOH HOH . 
F 5 HOH A 55 455 25 HOH HOH . 
F 5 HOH A 56 456 85 HOH HOH . 
F 5 HOH A 57 457 48 HOH HOH . 
F 5 HOH A 58 458 82 HOH HOH . 
F 5 HOH A 59 459 18 HOH HOH . 
F 5 HOH A 60 460 80 HOH HOH . 
F 5 HOH A 61 461 66 HOH HOH . 
F 5 HOH A 62 462 57 HOH HOH . 
F 5 HOH A 63 463 47 HOH HOH . 
F 5 HOH A 64 464 112 HOH HOH . 
F 5 HOH A 65 465 33 HOH HOH . 
F 5 HOH A 66 466 21 HOH HOH . 
F 5 HOH A 67 467 32 HOH HOH . 
F 5 HOH A 68 468 114 HOH HOH . 
F 5 HOH A 69 469 71 HOH HOH . 
F 5 HOH A 70 470 54 HOH HOH . 
F 5 HOH A 71 471 41 HOH HOH . 
F 5 HOH A 72 472 52 HOH HOH . 
F 5 HOH A 73 473 27 HOH HOH . 
F 5 HOH A 74 474 69 HOH HOH . 
F 5 HOH A 75 475 50 HOH HOH . 
F 5 HOH A 76 476 64 HOH HOH . 
F 5 HOH A 77 477 49 HOH HOH . 
F 5 HOH A 78 478 96 HOH HOH . 
F 5 HOH A 79 479 98 HOH HOH . 
F 5 HOH A 80 480 59 HOH HOH . 
F 5 HOH A 81 481 74 HOH HOH . 
F 5 HOH A 82 482 15 HOH HOH . 
F 5 HOH A 83 483 84 HOH HOH . 
F 5 HOH A 84 484 70 HOH HOH . 
F 5 HOH A 85 485 58 HOH HOH . 
F 5 HOH A 86 486 65 HOH HOH . 
F 5 HOH A 87 487 3 HOH HOH . 
F 5 HOH A 88 488 4 HOH HOH . 
F 5 HOH A 89 489 87 HOH HOH . 
F 5 HOH A 90 490 62 HOH HOH . 
F 5 HOH A 91 491 20 HOH HOH . 
F 5 HOH A 92 492 40 HOH HOH . 
F 5 HOH A 93 493 102 HOH HOH . 
F 5 HOH A 94 494 106 HOH HOH . 
F 5 HOH A 95 495 103 HOH HOH . 
F 5 HOH A 96 496 46 HOH HOH . 
F 5 HOH A 97 497 86 HOH HOH . 
F 5 HOH A 98 498 75 HOH HOH . 
F 5 HOH A 99 499 100 HOH HOH . 
F 5 HOH A 100 500 105 HOH HOH . 
F 5 HOH A 101 501 51 HOH HOH . 
F 5 HOH A 102 502 34 HOH HOH . 
F 5 HOH A 103 503 45 HOH HOH . 
F 5 HOH A 104 504 35 HOH HOH . 
F 5 HOH A 105 505 115 HOH HOH . 
F 5 HOH A 106 506 37 HOH HOH . 
F 5 HOH A 107 507 76 HOH HOH . 
F 5 HOH A 108 508 108 HOH HOH . 
F 5 HOH A 109 509 89 HOH HOH . 
F 5 HOH A 110 510 104 HOH HOH . 
F 5 HOH A 111 511 95 HOH HOH . 
F 5 HOH A 112 512 99 HOH HOH . 
F 5 HOH A 113 513 122 HOH HOH . 
F 5 HOH A 114 514 36 HOH HOH . 
F 5 HOH A 115 515 38 HOH HOH . 
F 5 HOH A 116 516 73 HOH HOH . 
F 5 HOH A 117 517 117 HOH HOH . 
F 5 HOH A 118 518 107 HOH HOH . 
F 5 HOH A 119 519 97 HOH HOH . 
F 5 HOH A 120 520 113 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 51.304 41.253 22.945 1 69.36 ? C1 GOL 301 A 1 
HETATM 2 O O1 GOL . . . B 2 49.958 40.802 23.151 1 74.47 ? O1 GOL 301 A 1 
HETATM 3 C C2 GOL . . . B 2 51.903 40.713 21.636 1 65.83 ? C2 GOL 301 A 1 
HETATM 4 O O2 GOL . . . B 2 51.738 39.291 21.547 1 68.17 ? O2 GOL 301 A 1 
HETATM 5 C C3 GOL . . . B 2 53.385 41.06 21.474 1 62.42 ? C3 GOL 301 A 1 
HETATM 6 O O3 GOL . . . B 2 54.315 40.264 22.27 1 53.08 ? O3 GOL 301 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#