data_5EG3 # _model_server_result.job_id vKZOwfYwn9CBPBjA-Z2Zrw _model_server_result.datetime_utc '2024-10-20 19:40:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eg3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 5EG3 # _exptl.entry_id 5EG3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.11 _cell.angle_gamma 90 _cell.entry_id 5EG3 _cell.length_a 79.609 _cell.length_b 53.231 _cell.length_c 127.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EG3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 324 A GLU 768 1_555 A N PTR 325 A PTR 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C PTR 325 A PTR 769 1_555 A N LEU 326 A LEU 770 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? metalc ? metalc1 A O ARG 186 A ARG 630 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.871 ? metalc ? metalc2 A OD1 ASN 187 A ASN 631 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc3 A OD1 ASN 187 A ASN 631 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc4 A OD2 ASP 200 A ASP 644 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc5 C O1A ACP . A ACP 801 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc6 C O1B ACP . A ACP 801 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc7 C O1A ACP . A ACP 801 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EG3 _atom_sites.fract_transf_matrix[1][1] 0.012561 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00224 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007957 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACP A 1 801 301 ACP ACP . D 4 MG A 1 802 1 MG MG . E 4 MG A 1 803 2 MG MG . F 5 HOH A 1 901 2 HOH HOH . F 5 HOH A 2 902 36 HOH HOH . F 5 HOH A 3 903 1 HOH HOH . F 5 HOH A 4 904 28 HOH HOH . F 5 HOH A 5 905 3 HOH HOH . F 5 HOH A 6 906 25 HOH HOH . F 5 HOH A 7 907 20 HOH HOH . F 5 HOH A 8 908 6 HOH HOH . F 5 HOH A 9 909 21 HOH HOH . F 5 HOH A 10 910 50 HOH HOH . F 5 HOH A 11 911 5 HOH HOH . F 5 HOH A 12 912 33 HOH HOH . F 5 HOH A 13 913 17 HOH HOH . F 5 HOH A 14 914 34 HOH HOH . F 5 HOH A 15 915 15 HOH HOH . F 5 HOH A 16 916 16 HOH HOH . F 5 HOH A 17 917 19 HOH HOH . F 5 HOH A 18 918 12 HOH HOH . F 5 HOH A 19 919 13 HOH HOH . F 5 HOH A 20 920 10 HOH HOH . F 5 HOH A 21 921 22 HOH HOH . F 5 HOH A 22 922 8 HOH HOH . F 5 HOH A 23 923 42 HOH HOH . F 5 HOH A 24 924 11 HOH HOH . F 5 HOH A 25 925 29 HOH HOH . F 5 HOH A 26 926 9 HOH HOH . F 5 HOH A 27 927 32 HOH HOH . F 5 HOH A 28 928 7 HOH HOH . F 5 HOH A 29 929 27 HOH HOH . F 5 HOH A 30 930 24 HOH HOH . F 5 HOH A 31 931 30 HOH HOH . F 5 HOH A 32 932 4 HOH HOH . F 5 HOH A 33 933 49 HOH HOH . F 5 HOH A 34 934 35 HOH HOH . F 5 HOH A 35 935 23 HOH HOH . F 5 HOH A 36 936 14 HOH HOH . F 5 HOH A 37 937 44 HOH HOH . F 5 HOH A 38 938 31 HOH HOH . F 5 HOH A 39 939 26 HOH HOH . G 5 HOH B 1 801 47 HOH HOH . G 5 HOH B 2 802 53 HOH HOH . G 5 HOH B 3 803 45 HOH HOH . G 5 HOH B 4 804 39 HOH HOH . G 5 HOH B 5 805 54 HOH HOH . G 5 HOH B 6 806 37 HOH HOH . G 5 HOH B 7 807 51 HOH HOH . G 5 HOH B 8 808 43 HOH HOH . G 5 HOH B 9 809 18 HOH HOH . G 5 HOH B 10 810 41 HOH HOH . G 5 HOH B 11 811 55 HOH HOH . G 5 HOH B 12 812 46 HOH HOH . G 5 HOH B 13 813 38 HOH HOH . G 5 HOH B 14 814 48 HOH HOH . G 5 HOH B 15 815 40 HOH HOH . G 5 HOH B 16 816 52 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 20.166 _atom_site.Cartn_y -5.778 _atom_site.Cartn_z 38.656 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 803 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #