data_5EGU
#
_model_server_result.job_id            yQBtBl7hWJJOxMKNQZkFLQ 
_model_server_result.datetime_utc      '2024-10-19 03:47:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5egu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":202}' 
#
_entry.id    5EGU 
#
_exptl.entry_id    5EGU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EGU 
_cell.length_a            69.686 
_cell.length_b            83.612 
_cell.length_c            107.391 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EGU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,J 1 1 
B,G,K 2 1 
C,H,L 3 1 
D,I,M 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 152 n n 
C1 C2 EDO sing 153 n n 
C1 H11 EDO sing 154 n n 
C1 H12 EDO sing 155 n n 
O1 HO1 EDO sing 156 n n 
C2 O2 EDO sing 157 n n 
C2 H21 EDO sing 158 n n 
C2 H22 EDO sing 159 n n 
O2 HO2 EDO sing 160 n n 
#
_atom_sites.entry_id                     5EGU 
_atom_sites.fract_transf_matrix[1][1]    0.01435 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01196 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009312 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 5NQ A 1 201 3 5NQ UNK . 
F 3 EDO A 1 202 3 EDO EDO . 
G 2 5NQ B 1 201 1 5NQ UNK . 
H 2 5NQ C 1 201 4 5NQ UNK . 
I 2 5NQ D 1 201 2 5NQ UNK . 
J 4 HOH A 1 301 20 HOH HOH . 
J 4 HOH A 2 302 97 HOH HOH . 
J 4 HOH A 3 303 52 HOH HOH . 
J 4 HOH A 4 304 192 HOH HOH . 
J 4 HOH A 5 305 230 HOH HOH . 
J 4 HOH A 6 306 165 HOH HOH . 
J 4 HOH A 7 307 147 HOH HOH . 
J 4 HOH A 8 308 46 HOH HOH . 
J 4 HOH A 9 309 11 HOH HOH . 
J 4 HOH A 10 310 47 HOH HOH . 
J 4 HOH A 11 311 81 HOH HOH . 
J 4 HOH A 12 312 217 HOH HOH . 
J 4 HOH A 13 313 1 HOH HOH . 
J 4 HOH A 14 314 34 HOH HOH . 
J 4 HOH A 15 315 148 HOH HOH . 
J 4 HOH A 16 316 13 HOH HOH . 
J 4 HOH A 17 317 171 HOH HOH . 
J 4 HOH A 18 318 106 HOH HOH . 
J 4 HOH A 19 319 8 HOH HOH . 
J 4 HOH A 20 320 79 HOH HOH . 
J 4 HOH A 21 321 90 HOH HOH . 
J 4 HOH A 22 322 17 HOH HOH . 
J 4 HOH A 23 323 215 HOH HOH . 
J 4 HOH A 24 324 22 HOH HOH . 
J 4 HOH A 25 325 27 HOH HOH . 
J 4 HOH A 26 326 93 HOH HOH . 
J 4 HOH A 27 327 53 HOH HOH . 
J 4 HOH A 28 328 1 HOH HOH . 
J 4 HOH A 29 329 24 HOH HOH . 
J 4 HOH A 30 330 128 HOH HOH . 
J 4 HOH A 31 331 115 HOH HOH . 
J 4 HOH A 32 332 132 HOH HOH . 
J 4 HOH A 33 333 129 HOH HOH . 
J 4 HOH A 34 334 116 HOH HOH . 
J 4 HOH A 35 335 14 HOH HOH . 
J 4 HOH A 36 336 7 HOH HOH . 
J 4 HOH A 37 337 86 HOH HOH . 
J 4 HOH A 38 338 166 HOH HOH . 
J 4 HOH A 39 339 198 HOH HOH . 
J 4 HOH A 40 340 200 HOH HOH . 
J 4 HOH A 41 341 139 HOH HOH . 
J 4 HOH A 42 342 153 HOH HOH . 
J 4 HOH A 43 343 236 HOH HOH . 
J 4 HOH A 44 344 204 HOH HOH . 
J 4 HOH A 45 345 237 HOH HOH . 
J 4 HOH A 46 346 112 HOH HOH . 
J 4 HOH A 47 347 154 HOH HOH . 
J 4 HOH A 48 348 125 HOH HOH . 
J 4 HOH A 49 349 179 HOH HOH . 
J 4 HOH A 50 350 235 HOH HOH . 
J 4 HOH A 51 351 62 HOH HOH . 
J 4 HOH A 52 352 218 HOH HOH . 
J 4 HOH A 53 353 134 HOH HOH . 
J 4 HOH A 54 354 131 HOH HOH . 
J 4 HOH A 55 355 111 HOH HOH . 
J 4 HOH A 56 356 231 HOH HOH . 
J 4 HOH A 57 357 136 HOH HOH . 
J 4 HOH A 58 358 213 HOH HOH . 
J 4 HOH A 59 359 233 HOH HOH . 
J 4 HOH A 60 360 162 HOH HOH . 
J 4 HOH A 61 361 214 HOH HOH . 
J 4 HOH A 62 362 4 HOH HOH . 
J 4 HOH A 63 363 228 HOH HOH . 
K 4 HOH B 1 301 141 HOH HOH . 
K 4 HOH B 2 302 73 HOH HOH . 
K 4 HOH B 3 303 102 HOH HOH . 
K 4 HOH B 4 304 65 HOH HOH . 
K 4 HOH B 5 305 149 HOH HOH . 
K 4 HOH B 6 306 103 HOH HOH . 
K 4 HOH B 7 307 172 HOH HOH . 
K 4 HOH B 8 308 10 HOH HOH . 
K 4 HOH B 9 309 211 HOH HOH . 
K 4 HOH B 10 310 91 HOH HOH . 
K 4 HOH B 11 311 152 HOH HOH . 
K 4 HOH B 12 312 185 HOH HOH . 
K 4 HOH B 13 313 50 HOH HOH . 
K 4 HOH B 14 314 121 HOH HOH . 
K 4 HOH B 15 315 155 HOH HOH . 
K 4 HOH B 16 316 99 HOH HOH . 
K 4 HOH B 17 317 26 HOH HOH . 
K 4 HOH B 18 318 3 HOH HOH . 
K 4 HOH B 19 319 168 HOH HOH . 
K 4 HOH B 20 320 118 HOH HOH . 
K 4 HOH B 21 321 16 HOH HOH . 
K 4 HOH B 22 322 88 HOH HOH . 
K 4 HOH B 23 323 40 HOH HOH . 
K 4 HOH B 24 324 61 HOH HOH . 
K 4 HOH B 25 325 29 HOH HOH . 
K 4 HOH B 26 326 137 HOH HOH . 
K 4 HOH B 27 327 45 HOH HOH . 
K 4 HOH B 28 328 33 HOH HOH . 
K 4 HOH B 29 329 145 HOH HOH . 
K 4 HOH B 30 330 170 HOH HOH . 
K 4 HOH B 31 331 205 HOH HOH . 
K 4 HOH B 32 332 39 HOH HOH . 
K 4 HOH B 33 333 6 HOH HOH . 
K 4 HOH B 34 334 85 HOH HOH . 
K 4 HOH B 35 335 25 HOH HOH . 
K 4 HOH B 36 336 84 HOH HOH . 
K 4 HOH B 37 337 41 HOH HOH . 
K 4 HOH B 38 338 98 HOH HOH . 
K 4 HOH B 39 339 54 HOH HOH . 
K 4 HOH B 40 340 223 HOH HOH . 
K 4 HOH B 41 341 30 HOH HOH . 
K 4 HOH B 42 342 77 HOH HOH . 
K 4 HOH B 43 343 95 HOH HOH . 
K 4 HOH B 44 344 83 HOH HOH . 
K 4 HOH B 45 345 60 HOH HOH . 
K 4 HOH B 46 346 57 HOH HOH . 
K 4 HOH B 47 347 173 HOH HOH . 
K 4 HOH B 48 348 89 HOH HOH . 
K 4 HOH B 49 349 67 HOH HOH . 
K 4 HOH B 50 350 59 HOH HOH . 
K 4 HOH B 51 351 32 HOH HOH . 
K 4 HOH B 52 352 42 HOH HOH . 
K 4 HOH B 53 353 21 HOH HOH . 
K 4 HOH B 54 354 44 HOH HOH . 
K 4 HOH B 55 355 144 HOH HOH . 
K 4 HOH B 56 356 142 HOH HOH . 
K 4 HOH B 57 357 49 HOH HOH . 
K 4 HOH B 58 358 101 HOH HOH . 
K 4 HOH B 59 359 227 HOH HOH . 
K 4 HOH B 60 360 201 HOH HOH . 
K 4 HOH B 61 361 242 HOH HOH . 
K 4 HOH B 62 362 206 HOH HOH . 
K 4 HOH B 63 363 177 HOH HOH . 
K 4 HOH B 64 364 210 HOH HOH . 
K 4 HOH B 65 365 229 HOH HOH . 
K 4 HOH B 66 366 164 HOH HOH . 
K 4 HOH B 67 367 221 HOH HOH . 
K 4 HOH B 68 368 190 HOH HOH . 
K 4 HOH B 69 369 120 HOH HOH . 
K 4 HOH B 70 370 225 HOH HOH . 
K 4 HOH B 71 371 191 HOH HOH . 
K 4 HOH B 72 372 194 HOH HOH . 
L 4 HOH C 1 301 203 HOH HOH . 
L 4 HOH C 2 302 107 HOH HOH . 
L 4 HOH C 3 303 197 HOH HOH . 
L 4 HOH C 4 304 209 HOH HOH . 
L 4 HOH C 5 305 161 HOH HOH . 
L 4 HOH C 6 306 140 HOH HOH . 
L 4 HOH C 7 307 43 HOH HOH . 
L 4 HOH C 8 308 2 HOH HOH . 
L 4 HOH C 9 309 157 HOH HOH . 
L 4 HOH C 10 310 9 HOH HOH . 
L 4 HOH C 11 311 216 HOH HOH . 
L 4 HOH C 12 312 23 HOH HOH . 
L 4 HOH C 13 313 110 HOH HOH . 
L 4 HOH C 14 314 4 HOH HOH . 
L 4 HOH C 15 315 96 HOH HOH . 
L 4 HOH C 16 316 113 HOH HOH . 
L 4 HOH C 17 317 151 HOH HOH . 
L 4 HOH C 18 318 72 HOH HOH . 
L 4 HOH C 19 319 243 HOH HOH . 
L 4 HOH C 20 320 3 HOH HOH . 
L 4 HOH C 21 321 55 HOH HOH . 
L 4 HOH C 22 322 138 HOH HOH . 
L 4 HOH C 23 323 232 HOH HOH . 
L 4 HOH C 24 324 87 HOH HOH . 
L 4 HOH C 25 325 195 HOH HOH . 
L 4 HOH C 26 326 78 HOH HOH . 
L 4 HOH C 27 327 28 HOH HOH . 
L 4 HOH C 28 328 175 HOH HOH . 
L 4 HOH C 29 329 202 HOH HOH . 
L 4 HOH C 30 330 18 HOH HOH . 
L 4 HOH C 31 331 6 HOH HOH . 
L 4 HOH C 32 332 238 HOH HOH . 
L 4 HOH C 33 333 167 HOH HOH . 
L 4 HOH C 34 334 187 HOH HOH . 
L 4 HOH C 35 335 2 HOH HOH . 
L 4 HOH C 36 336 212 HOH HOH . 
L 4 HOH C 37 337 119 HOH HOH . 
L 4 HOH C 38 338 176 HOH HOH . 
L 4 HOH C 39 339 70 HOH HOH . 
L 4 HOH C 40 340 31 HOH HOH . 
L 4 HOH C 41 341 35 HOH HOH . 
L 4 HOH C 42 342 108 HOH HOH . 
L 4 HOH C 43 343 63 HOH HOH . 
L 4 HOH C 44 344 188 HOH HOH . 
L 4 HOH C 45 345 15 HOH HOH . 
L 4 HOH C 46 346 234 HOH HOH . 
L 4 HOH C 47 347 130 HOH HOH . 
L 4 HOH C 48 348 174 HOH HOH . 
L 4 HOH C 49 349 124 HOH HOH . 
L 4 HOH C 50 350 244 HOH HOH . 
L 4 HOH C 51 351 193 HOH HOH . 
L 4 HOH C 52 352 239 HOH HOH . 
L 4 HOH C 53 353 5 HOH HOH . 
L 4 HOH C 54 354 158 HOH HOH . 
L 4 HOH C 55 355 117 HOH HOH . 
L 4 HOH C 56 356 241 HOH HOH . 
L 4 HOH C 57 357 240 HOH HOH . 
L 4 HOH C 58 358 156 HOH HOH . 
L 4 HOH C 59 359 105 HOH HOH . 
L 4 HOH C 60 360 94 HOH HOH . 
L 4 HOH C 61 361 196 HOH HOH . 
L 4 HOH C 62 362 109 HOH HOH . 
L 4 HOH C 63 363 181 HOH HOH . 
L 4 HOH C 64 364 169 HOH HOH . 
M 4 HOH D 1 301 133 HOH HOH . 
M 4 HOH D 2 302 38 HOH HOH . 
M 4 HOH D 3 303 71 HOH HOH . 
M 4 HOH D 4 304 64 HOH HOH . 
M 4 HOH D 5 305 220 HOH HOH . 
M 4 HOH D 6 306 199 HOH HOH . 
M 4 HOH D 7 307 184 HOH HOH . 
M 4 HOH D 8 308 68 HOH HOH . 
M 4 HOH D 9 309 36 HOH HOH . 
M 4 HOH D 10 310 56 HOH HOH . 
M 4 HOH D 11 311 224 HOH HOH . 
M 4 HOH D 12 312 80 HOH HOH . 
M 4 HOH D 13 313 5 HOH HOH . 
M 4 HOH D 14 314 159 HOH HOH . 
M 4 HOH D 15 315 135 HOH HOH . 
M 4 HOH D 16 316 114 HOH HOH . 
M 4 HOH D 17 317 126 HOH HOH . 
M 4 HOH D 18 318 82 HOH HOH . 
M 4 HOH D 19 319 58 HOH HOH . 
M 4 HOH D 20 320 19 HOH HOH . 
M 4 HOH D 21 321 76 HOH HOH . 
M 4 HOH D 22 322 69 HOH HOH . 
M 4 HOH D 23 323 150 HOH HOH . 
M 4 HOH D 24 324 12 HOH HOH . 
M 4 HOH D 25 325 74 HOH HOH . 
M 4 HOH D 26 326 180 HOH HOH . 
M 4 HOH D 27 327 143 HOH HOH . 
M 4 HOH D 28 328 48 HOH HOH . 
M 4 HOH D 29 329 163 HOH HOH . 
M 4 HOH D 30 330 104 HOH HOH . 
M 4 HOH D 31 331 66 HOH HOH . 
M 4 HOH D 32 332 75 HOH HOH . 
M 4 HOH D 33 333 160 HOH HOH . 
M 4 HOH D 34 334 123 HOH HOH . 
M 4 HOH D 35 335 146 HOH HOH . 
M 4 HOH D 36 336 51 HOH HOH . 
M 4 HOH D 37 337 37 HOH HOH . 
M 4 HOH D 38 338 222 HOH HOH . 
M 4 HOH D 39 339 127 HOH HOH . 
M 4 HOH D 40 340 122 HOH HOH . 
M 4 HOH D 41 341 226 HOH HOH . 
M 4 HOH D 42 342 92 HOH HOH . 
M 4 HOH D 43 343 208 HOH HOH . 
M 4 HOH D 44 344 182 HOH HOH . 
M 4 HOH D 45 345 207 HOH HOH . 
M 4 HOH D 46 346 189 HOH HOH . 
M 4 HOH D 47 347 178 HOH HOH . 
M 4 HOH D 48 348 219 HOH HOH . 
M 4 HOH D 49 349 100 HOH HOH . 
M 4 HOH D 50 350 186 HOH HOH . 
M 4 HOH D 51 351 183 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 3 2.152 16.833 64.243 1 40.69 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . F 3 0.96 16.331 63.647 1 37.98 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . F 3 2.662 15.881 65.307 1 39.69 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . F 3 2.226 14.571 64.941 1 41.53 ? O2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           96 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#