data_5EH0 # _model_server_result.job_id Smeqf17AnNOyOUDe4NF3nA _model_server_result.datetime_utc '2025-02-18 02:03:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eh0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 5EH0 # _exptl.entry_id 5EH0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EH0 _cell.length_a 70.42 _cell.length_b 105.92 _cell.length_c 112.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EH0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -105.92 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 144 n n S C1 DMS sing 145 n n S C2 DMS sing 146 n n C1 H11 DMS sing 147 n n C1 H12 DMS sing 148 n n C1 H13 DMS sing 149 n n C2 H21 DMS sing 150 n n C2 H22 DMS sing 151 n n C2 H23 DMS sing 152 n n # _atom_sites.entry_id 5EH0 _atom_sites.fract_transf_matrix[1][1] 0.014201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009441 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5NW A 1 801 1 5NW Z00 . C 3 DMS A 1 802 1 DMS DMS . D 4 HOH A 1 901 2 HOH HOH . D 4 HOH A 2 902 9 HOH HOH . D 4 HOH A 3 903 15 HOH HOH . D 4 HOH A 4 904 30 HOH HOH . D 4 HOH A 5 905 7 HOH HOH . D 4 HOH A 6 906 46 HOH HOH . D 4 HOH A 7 907 6 HOH HOH . D 4 HOH A 8 908 52 HOH HOH . D 4 HOH A 9 909 45 HOH HOH . D 4 HOH A 10 910 16 HOH HOH . D 4 HOH A 11 911 25 HOH HOH . D 4 HOH A 12 912 35 HOH HOH . D 4 HOH A 13 913 20 HOH HOH . D 4 HOH A 14 914 28 HOH HOH . D 4 HOH A 15 915 47 HOH HOH . D 4 HOH A 16 916 5 HOH HOH . D 4 HOH A 17 917 17 HOH HOH . D 4 HOH A 18 918 48 HOH HOH . D 4 HOH A 19 919 4 HOH HOH . D 4 HOH A 20 920 34 HOH HOH . D 4 HOH A 21 921 26 HOH HOH . D 4 HOH A 22 922 49 HOH HOH . D 4 HOH A 23 923 53 HOH HOH . D 4 HOH A 24 924 29 HOH HOH . D 4 HOH A 25 925 22 HOH HOH . D 4 HOH A 26 926 31 HOH HOH . D 4 HOH A 27 927 1 HOH HOH . D 4 HOH A 28 928 10 HOH HOH . D 4 HOH A 29 929 14 HOH HOH . D 4 HOH A 30 930 27 HOH HOH . D 4 HOH A 31 931 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 3 5.495 -20.423 -8.214 1 125.64 ? S DMS 802 A 1 HETATM 2 O O DMS . . . C 3 6.673 -20.373 -9.098 1 124.64 ? O DMS 802 A 1 HETATM 3 C C1 DMS . . . C 3 6.134 -20.231 -6.568 1 125.44 ? C1 DMS 802 A 1 HETATM 4 C C2 DMS . . . C 3 4.702 -18.846 -8.406 1 125.31 ? C2 DMS 802 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #