data_5EHO # _model_server_result.job_id ndB7FS73kp4w4Ij3zbKjEA _model_server_result.datetime_utc '2024-11-06 01:34:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 5EHO # _exptl.entry_id 5EHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 429.517 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}8-cyclohexyl-~{N}2-[2-methoxy-4-(1-methylpyrazol-4-yl)phenyl]pyrido[3,4-d]pyrimidine-2,8-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EHO _cell.length_a 70.945 _cell.length_b 105.486 _cell.length_c 111.692 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H27 N7 O' _chem_comp.formula_weight 429.517 _chem_comp.id 5O1 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}8-cyclohexyl-~{N}2-[2-methoxy-4-(1-methylpyrazol-4-yl)phenyl]pyrido[3,4-d]pyrimidine-2,8-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C22 5O1 sing 1 n n C23 C18 5O1 sing 2 n n C16 N5 5O1 doub 3 n y C16 C15 5O1 sing 4 n y N5 C17 5O1 sing 5 n y C22 C21 5O1 sing 6 n n C18 C19 5O1 sing 7 n n C18 N6 5O1 sing 8 n n C15 C1 5O1 doub 9 n y C21 C20 5O1 sing 10 n n C17 N6 5O1 sing 11 n n C17 C 5O1 doub 12 n y C19 C20 5O1 sing 13 n n C1 C 5O1 sing 14 n y C1 C2 5O1 sing 15 n y C N1 5O1 sing 16 n y C2 N 5O1 doub 17 n y N1 C3 5O1 doub 18 n y N C3 5O1 sing 19 n y C3 N2 5O1 sing 20 n n C5 C6 5O1 doub 21 n y C5 C4 5O1 sing 22 n y C6 C7 5O1 sing 23 n y N2 C4 5O1 sing 24 n n C4 C9 5O1 doub 25 n y C13 C11 5O1 doub 26 n y C13 N4 5O1 sing 27 n y C7 C11 5O1 sing 28 n n C7 C8 5O1 doub 29 n y C14 N4 5O1 sing 30 n n C11 C12 5O1 sing 31 n y N4 N3 5O1 sing 32 n y C9 C8 5O1 sing 33 n y C9 O 5O1 sing 34 n n C12 N3 5O1 doub 35 n y O C10 5O1 sing 36 n n C6 H1 5O1 sing 37 n n C8 H2 5O1 sing 38 n n C10 H3 5O1 sing 39 n n C10 H4 5O1 sing 40 n n C10 H5 5O1 sing 41 n n C12 H6 5O1 sing 42 n n C13 H7 5O1 sing 43 n n C15 H8 5O1 sing 44 n n C18 H9 5O1 sing 45 n n C19 H10 5O1 sing 46 n n C19 H11 5O1 sing 47 n n C20 H12 5O1 sing 48 n n C20 H13 5O1 sing 49 n n C21 H14 5O1 sing 50 n n C21 H15 5O1 sing 51 n n C22 H16 5O1 sing 52 n n C22 H17 5O1 sing 53 n n C23 H18 5O1 sing 54 n n C23 H19 5O1 sing 55 n n C14 H20 5O1 sing 56 n n C14 H21 5O1 sing 57 n n C14 H22 5O1 sing 58 n n C5 H23 5O1 sing 59 n n N2 H24 5O1 sing 60 n n C2 H25 5O1 sing 61 n n C16 H26 5O1 sing 62 n n N6 H27 5O1 sing 63 n n # _atom_sites.entry_id 5EHO _atom_sites.fract_transf_matrix[1][1] 0.014095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5O1 A 1 901 1 5O1 Z00 . C 3 DMS A 1 902 1 DMS DMS . D 4 HOH A 1 1001 47 HOH HOH . D 4 HOH A 2 1002 32 HOH HOH . D 4 HOH A 3 1003 35 HOH HOH . D 4 HOH A 4 1004 22 HOH HOH . D 4 HOH A 5 1005 19 HOH HOH . D 4 HOH A 6 1006 10 HOH HOH . D 4 HOH A 7 1007 6 HOH HOH . D 4 HOH A 8 1008 8 HOH HOH . D 4 HOH A 9 1009 15 HOH HOH . D 4 HOH A 10 1010 1 HOH HOH . D 4 HOH A 11 1011 49 HOH HOH . D 4 HOH A 12 1012 54 HOH HOH . D 4 HOH A 13 1013 72 HOH HOH . D 4 HOH A 14 1014 11 HOH HOH . D 4 HOH A 15 1015 9 HOH HOH . D 4 HOH A 16 1016 42 HOH HOH . D 4 HOH A 17 1017 2 HOH HOH . D 4 HOH A 18 1018 14 HOH HOH . D 4 HOH A 19 1019 18 HOH HOH . D 4 HOH A 20 1020 24 HOH HOH . D 4 HOH A 21 1021 23 HOH HOH . D 4 HOH A 22 1022 31 HOH HOH . D 4 HOH A 23 1023 68 HOH HOH . D 4 HOH A 24 1024 43 HOH HOH . D 4 HOH A 25 1025 67 HOH HOH . D 4 HOH A 26 1026 33 HOH HOH . D 4 HOH A 27 1027 64 HOH HOH . D 4 HOH A 28 1028 50 HOH HOH . D 4 HOH A 29 1029 26 HOH HOH . D 4 HOH A 30 1030 51 HOH HOH . D 4 HOH A 31 1031 53 HOH HOH . D 4 HOH A 32 1032 36 HOH HOH . D 4 HOH A 33 1033 4 HOH HOH . D 4 HOH A 34 1034 27 HOH HOH . D 4 HOH A 35 1035 16 HOH HOH . D 4 HOH A 36 1036 17 HOH HOH . D 4 HOH A 37 1037 13 HOH HOH . D 4 HOH A 38 1038 57 HOH HOH . D 4 HOH A 39 1039 5 HOH HOH . D 4 HOH A 40 1040 39 HOH HOH . D 4 HOH A 41 1041 45 HOH HOH . D 4 HOH A 42 1042 44 HOH HOH . D 4 HOH A 43 1043 58 HOH HOH . D 4 HOH A 44 1044 20 HOH HOH . D 4 HOH A 45 1045 48 HOH HOH . D 4 HOH A 46 1046 3 HOH HOH . D 4 HOH A 47 1047 34 HOH HOH . D 4 HOH A 48 1048 38 HOH HOH . D 4 HOH A 49 1049 25 HOH HOH . D 4 HOH A 50 1050 12 HOH HOH . D 4 HOH A 51 1051 52 HOH HOH . D 4 HOH A 52 1052 63 HOH HOH . D 4 HOH A 53 1053 7 HOH HOH . D 4 HOH A 54 1054 66 HOH HOH . D 4 HOH A 55 1055 55 HOH HOH . D 4 HOH A 56 1056 21 HOH HOH . D 4 HOH A 57 1057 59 HOH HOH . D 4 HOH A 58 1058 61 HOH HOH . D 4 HOH A 59 1059 60 HOH HOH . D 4 HOH A 60 1060 69 HOH HOH . D 4 HOH A 61 1061 62 HOH HOH . D 4 HOH A 62 1062 71 HOH HOH . D 4 HOH A 63 1063 65 HOH HOH . D 4 HOH A 64 1064 70 HOH HOH . D 4 HOH A 65 1065 73 HOH HOH . D 4 HOH A 66 1066 56 HOH HOH . D 4 HOH A 67 1067 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5O1 . . . B 2 1.266 -32.573 -11.851 1 44.61 ? C1 5O1 901 A 1 HETATM 2 N N5 5O1 . . . B 2 2.578 -34.351 -13.565 1 47.7 ? N5 5O1 901 A 1 HETATM 3 C C6 5O1 . . . B 2 -1.669 -37.682 -8.969 1 50.89 ? C6 5O1 901 A 1 HETATM 4 C C7 5O1 . . . B 2 -1.698 -38.048 -7.631 1 54.81 ? C7 5O1 901 A 1 HETATM 5 C C8 5O1 . . . B 2 -1.431 -37.085 -6.665 1 52.15 ? C8 5O1 901 A 1 HETATM 6 C C9 5O1 . . . B 2 -1.155 -35.783 -7.056 1 52.74 ? C9 5O1 901 A 1 HETATM 7 C C10 5O1 . . . B 2 -1.812 -34.741 -5.083 1 58.69 ? C10 5O1 901 A 1 HETATM 8 C C11 5O1 . . . B 2 -2.037 -39.392 -7.262 1 58.93 ? C11 5O1 901 A 1 HETATM 9 C C12 5O1 . . . B 2 -2.866 -39.793 -6.174 1 62.4 ? C12 5O1 901 A 1 HETATM 10 C C13 5O1 . . . B 2 -1.66 -40.569 -7.894 1 59.45 ? C13 5O1 901 A 1 HETATM 11 C C15 5O1 . . . B 2 2.012 -32.083 -12.932 1 40.85 ? C15 5O1 901 A 1 HETATM 12 C C18 5O1 . . . B 2 2.297 -37.177 -13.208 1 50.69 ? C18 5O1 901 A 1 HETATM 13 C C19 5O1 . . . B 2 2.644 -38.424 -12.381 1 48.78 ? C19 5O1 901 A 1 HETATM 14 C C20 5O1 . . . B 2 1.391 -38.898 -11.657 1 48.35 ? C20 5O1 901 A 1 HETATM 15 C C21 5O1 . . . B 2 0.314 -39.265 -12.666 1 52.56 ? C21 5O1 901 A 1 HETATM 16 C C22 5O1 . . . B 2 -0.023 -38.053 -13.525 1 53.72 ? C22 5O1 901 A 1 HETATM 17 C C23 5O1 . . . B 2 1.222 -37.548 -14.244 1 54.01 ? C23 5O1 901 A 1 HETATM 18 C C14 5O1 . . . B 2 -2.157 -43.024 -7.488 1 64.31 ? C14 5O1 901 A 1 HETATM 19 N N4 5O1 . . . B 2 -2.263 -41.594 -7.185 1 64.14 ? N4 5O1 901 A 1 HETATM 20 N N3 5O1 . . . B 2 -2.996 -41.136 -6.139 1 65.43 ? N3 5O1 901 A 1 HETATM 21 C C5 5O1 . . . B 2 -1.401 -36.384 -9.356 1 48.17 ? C5 5O1 901 A 1 HETATM 22 O O 5O1 . . . B 2 -0.855 -34.843 -6.105 1 57.29 ? O 5O1 901 A 1 HETATM 23 C C4 5O1 . . . B 2 -1.145 -35.402 -8.408 1 49.96 ? C4 5O1 901 A 1 HETATM 24 N N2 5O1 . . . B 2 -0.889 -34.063 -8.721 1 49.93 ? N2 5O1 901 A 1 HETATM 25 C C3 5O1 . . . B 2 -0.145 -33.625 -9.797 1 46.71 ? C3 5O1 901 A 1 HETATM 26 N N 5O1 . . . B 2 -0.127 -32.213 -9.921 1 45.71 ? N 5O1 901 A 1 HETATM 27 C C2 5O1 . . . B 2 0.566 -31.739 -10.928 1 44.42 ? C2 5O1 901 A 1 HETATM 28 N N1 5O1 . . . B 2 0.469 -34.492 -10.6 1 44.42 ? N1 5O1 901 A 1 HETATM 29 C C 5O1 . . . B 2 1.172 -33.938 -11.624 1 46.03 ? C 5O1 901 A 1 HETATM 30 C C17 5O1 . . . B 2 1.862 -34.819 -12.525 1 48.66 ? C17 5O1 901 A 1 HETATM 31 C C16 5O1 . . . B 2 2.632 -33.001 -13.737 1 41.88 ? C16 5O1 901 A 1 HETATM 32 N N6 5O1 . . . B 2 1.782 -36.165 -12.291 1 49.86 ? N6 5O1 901 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #