data_5EIA # _model_server_result.job_id C39YBqsmiUdra6lZsyFoxQ _model_server_result.datetime_utc '2024-11-23 01:32:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 5EIA # _exptl.entry_id 5EIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EIA _cell.length_a 79.47 _cell.length_b 112.52 _cell.length_c 226.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 257 A CYS 257 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf3 A SG CYS 409 A CYS 409 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 B SG CYS 69 B CYS 69 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 B SG CYS 257 B CYS 257 1_555 B SG CYS 272 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf6 B SG CYS 409 B CYS 409 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? covale ? covale1 A ND2 ASN 350 A ASN 350 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 464 A ASN 464 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale3 B ND2 ASN 350 B ASN 350 1_555 G C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale4 B ND2 ASN 464 B ASN 464 1_555 H C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 366 n n O1 HO1 PG4 sing 367 n n C1 C2 PG4 sing 368 n n C1 H11 PG4 sing 369 n n C1 H12 PG4 sing 370 n n C2 O2 PG4 sing 371 n n C2 H21 PG4 sing 372 n n C2 H22 PG4 sing 373 n n O2 C3 PG4 sing 374 n n C3 C4 PG4 sing 375 n n C3 H31 PG4 sing 376 n n C3 H32 PG4 sing 377 n n C4 O3 PG4 sing 378 n n C4 H41 PG4 sing 379 n n C4 H42 PG4 sing 380 n n O3 C5 PG4 sing 381 n n C5 C6 PG4 sing 382 n n C5 H51 PG4 sing 383 n n C5 H52 PG4 sing 384 n n C6 O4 PG4 sing 385 n n C6 H61 PG4 sing 386 n n C6 H62 PG4 sing 387 n n O4 C7 PG4 sing 388 n n C7 C8 PG4 sing 389 n n C7 H71 PG4 sing 390 n n C7 H72 PG4 sing 391 n n C8 O5 PG4 sing 392 n n C8 H81 PG4 sing 393 n n C8 H82 PG4 sing 394 n n O5 HO5 PG4 sing 395 n n # _atom_sites.entry_id 5EIA _atom_sites.fract_transf_matrix[1][1] 0.012583 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 601 601 NAG NAG . D 2 NAG A 1 602 701 NAG NAG . E 3 5O2 A 1 603 901 5O2 TZ5 . F 4 PG4 A 1 604 501 PG4 PG4 . G 2 NAG B 1 601 602 NAG NAG . H 2 NAG B 1 602 702 NAG NAG . I 3 5O2 B 1 603 951 5O2 TZ5 . J 5 HOH A 1 701 63 HOH HOH . J 5 HOH A 2 702 41 HOH HOH . J 5 HOH A 3 703 4 HOH HOH . J 5 HOH A 4 704 117 HOH HOH . J 5 HOH A 5 705 62 HOH HOH . J 5 HOH A 6 706 95 HOH HOH . J 5 HOH A 7 707 38 HOH HOH . J 5 HOH A 8 708 124 HOH HOH . J 5 HOH A 9 709 45 HOH HOH . J 5 HOH A 10 710 43 HOH HOH . J 5 HOH A 11 711 11 HOH HOH . J 5 HOH A 12 712 12 HOH HOH . J 5 HOH A 13 713 122 HOH HOH . J 5 HOH A 14 714 123 HOH HOH . J 5 HOH A 15 715 44 HOH HOH . J 5 HOH A 16 716 80 HOH HOH . J 5 HOH A 17 717 125 HOH HOH . J 5 HOH A 18 718 151 HOH HOH . J 5 HOH A 19 719 153 HOH HOH . J 5 HOH A 20 720 178 HOH HOH . J 5 HOH A 21 721 109 HOH HOH . J 5 HOH A 22 722 47 HOH HOH . J 5 HOH A 23 723 121 HOH HOH . J 5 HOH A 24 724 16 HOH HOH . J 5 HOH A 25 725 137 HOH HOH . J 5 HOH A 26 726 88 HOH HOH . J 5 HOH A 27 727 172 HOH HOH . J 5 HOH A 28 728 152 HOH HOH . J 5 HOH A 29 729 120 HOH HOH . J 5 HOH A 30 730 84 HOH HOH . J 5 HOH A 31 731 81 HOH HOH . J 5 HOH A 32 732 87 HOH HOH . J 5 HOH A 33 733 64 HOH HOH . J 5 HOH A 34 734 92 HOH HOH . J 5 HOH A 35 735 46 HOH HOH . J 5 HOH A 36 736 15 HOH HOH . J 5 HOH A 37 737 179 HOH HOH . J 5 HOH A 38 738 67 HOH HOH . J 5 HOH A 39 739 143 HOH HOH . J 5 HOH A 40 740 68 HOH HOH . J 5 HOH A 41 741 65 HOH HOH . J 5 HOH A 42 742 167 HOH HOH . J 5 HOH A 43 743 108 HOH HOH . J 5 HOH A 44 744 58 HOH HOH . J 5 HOH A 45 745 8 HOH HOH . J 5 HOH A 46 746 173 HOH HOH . J 5 HOH A 47 747 93 HOH HOH . J 5 HOH A 48 748 127 HOH HOH . J 5 HOH A 49 749 126 HOH HOH . J 5 HOH A 50 750 133 HOH HOH . J 5 HOH A 51 751 183 HOH HOH . J 5 HOH A 52 752 139 HOH HOH . J 5 HOH A 53 753 176 HOH HOH . J 5 HOH A 54 754 128 HOH HOH . J 5 HOH A 55 755 19 HOH HOH . J 5 HOH A 56 756 182 HOH HOH . J 5 HOH A 57 757 146 HOH HOH . J 5 HOH A 58 758 136 HOH HOH . J 5 HOH A 59 759 78 HOH HOH . J 5 HOH A 60 760 138 HOH HOH . J 5 HOH A 61 761 79 HOH HOH . J 5 HOH A 62 762 5 HOH HOH . J 5 HOH A 63 763 154 HOH HOH . J 5 HOH A 64 764 74 HOH HOH . J 5 HOH A 65 765 56 HOH HOH . J 5 HOH A 66 766 150 HOH HOH . J 5 HOH A 67 767 40 HOH HOH . J 5 HOH A 68 768 69 HOH HOH . J 5 HOH A 69 769 3 HOH HOH . J 5 HOH A 70 770 175 HOH HOH . J 5 HOH A 71 771 131 HOH HOH . J 5 HOH A 72 772 89 HOH HOH . J 5 HOH A 73 773 96 HOH HOH . J 5 HOH A 74 774 71 HOH HOH . J 5 HOH A 75 775 94 HOH HOH . J 5 HOH A 76 776 110 HOH HOH . J 5 HOH A 77 777 118 HOH HOH . J 5 HOH A 78 778 141 HOH HOH . J 5 HOH A 79 779 132 HOH HOH . J 5 HOH A 80 780 194 HOH HOH . J 5 HOH A 81 781 57 HOH HOH . J 5 HOH A 82 782 97 HOH HOH . J 5 HOH A 83 783 189 HOH HOH . J 5 HOH A 84 784 13 HOH HOH . J 5 HOH A 85 785 77 HOH HOH . J 5 HOH A 86 786 170 HOH HOH . J 5 HOH A 87 787 82 HOH HOH . J 5 HOH A 88 788 145 HOH HOH . J 5 HOH A 89 789 140 HOH HOH . J 5 HOH A 90 790 174 HOH HOH . J 5 HOH A 91 791 31 HOH HOH . J 5 HOH A 92 792 193 HOH HOH . J 5 HOH A 93 793 135 HOH HOH . J 5 HOH A 94 794 180 HOH HOH . J 5 HOH A 95 795 98 HOH HOH . J 5 HOH A 96 796 32 HOH HOH . J 5 HOH A 97 797 148 HOH HOH . J 5 HOH A 98 798 73 HOH HOH . J 5 HOH A 99 799 22 HOH HOH . J 5 HOH A 100 800 188 HOH HOH . J 5 HOH A 101 801 149 HOH HOH . J 5 HOH A 102 802 181 HOH HOH . J 5 HOH A 103 803 155 HOH HOH . J 5 HOH A 104 804 156 HOH HOH . J 5 HOH A 105 805 187 HOH HOH . J 5 HOH A 106 806 184 HOH HOH . K 5 HOH B 1 701 99 HOH HOH . K 5 HOH B 2 702 42 HOH HOH . K 5 HOH B 3 703 66 HOH HOH . K 5 HOH B 4 704 134 HOH HOH . K 5 HOH B 5 705 53 HOH HOH . K 5 HOH B 6 706 50 HOH HOH . K 5 HOH B 7 707 60 HOH HOH . K 5 HOH B 8 708 83 HOH HOH . K 5 HOH B 9 709 101 HOH HOH . K 5 HOH B 10 710 130 HOH HOH . K 5 HOH B 11 711 52 HOH HOH . K 5 HOH B 12 712 115 HOH HOH . K 5 HOH B 13 713 72 HOH HOH . K 5 HOH B 14 714 29 HOH HOH . K 5 HOH B 15 715 191 HOH HOH . K 5 HOH B 16 716 104 HOH HOH . K 5 HOH B 17 717 24 HOH HOH . K 5 HOH B 18 718 61 HOH HOH . K 5 HOH B 19 719 48 HOH HOH . K 5 HOH B 20 720 100 HOH HOH . K 5 HOH B 21 721 55 HOH HOH . K 5 HOH B 22 722 75 HOH HOH . K 5 HOH B 23 723 107 HOH HOH . K 5 HOH B 24 724 142 HOH HOH . K 5 HOH B 25 725 6 HOH HOH . K 5 HOH B 26 726 157 HOH HOH . K 5 HOH B 27 727 103 HOH HOH . K 5 HOH B 28 728 129 HOH HOH . K 5 HOH B 29 729 114 HOH HOH . K 5 HOH B 30 730 36 HOH HOH . K 5 HOH B 31 731 190 HOH HOH . K 5 HOH B 32 732 76 HOH HOH . K 5 HOH B 33 733 119 HOH HOH . K 5 HOH B 34 734 144 HOH HOH . K 5 HOH B 35 735 105 HOH HOH . K 5 HOH B 36 736 39 HOH HOH . K 5 HOH B 37 737 171 HOH HOH . K 5 HOH B 38 738 160 HOH HOH . K 5 HOH B 39 739 14 HOH HOH . K 5 HOH B 40 740 158 HOH HOH . K 5 HOH B 41 741 186 HOH HOH . K 5 HOH B 42 742 106 HOH HOH . K 5 HOH B 43 743 18 HOH HOH . K 5 HOH B 44 744 85 HOH HOH . K 5 HOH B 45 745 51 HOH HOH . K 5 HOH B 46 746 195 HOH HOH . K 5 HOH B 47 747 25 HOH HOH . K 5 HOH B 48 748 59 HOH HOH . K 5 HOH B 49 749 192 HOH HOH . K 5 HOH B 50 750 177 HOH HOH . K 5 HOH B 51 751 185 HOH HOH . K 5 HOH B 52 752 90 HOH HOH . K 5 HOH B 53 753 10 HOH HOH . K 5 HOH B 54 754 86 HOH HOH . K 5 HOH B 55 755 168 HOH HOH . K 5 HOH B 56 756 147 HOH HOH . K 5 HOH B 57 757 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 4 18.356 6.142 -10.664 1 56.08 ? O1 PG4 604 A 1 HETATM 2 C C1 PG4 . . . F 4 19.573 5.805 -9.97 1 58.71 ? C1 PG4 604 A 1 HETATM 3 C C2 PG4 . . . F 4 20.602 5.025 -10.814 1 63.3 ? C2 PG4 604 A 1 HETATM 4 O O2 PG4 . . . F 4 21.22 5.792 -11.874 1 66.93 ? O2 PG4 604 A 1 HETATM 5 C C3 PG4 . . . F 4 22.463 5.209 -12.343 1 64.47 ? C3 PG4 604 A 1 HETATM 6 C C4 PG4 . . . F 4 23.171 6.023 -13.448 1 59.99 ? C4 PG4 604 A 1 HETATM 7 O O3 PG4 . . . F 4 22.896 7.422 -13.315 1 60.2 ? O3 PG4 604 A 1 HETATM 8 C C5 PG4 . . . F 4 23.69 8.333 -14.096 1 59.24 ? C5 PG4 604 A 1 HETATM 9 C C6 PG4 . . . F 4 23.075 9.752 -14.091 1 60.97 ? C6 PG4 604 A 1 HETATM 10 O O4 PG4 . . . F 4 21.878 9.831 -14.897 1 66.59 ? O4 PG4 604 A 1 HETATM 11 C C7 PG4 . . . F 4 21.234 11.12 -14.971 1 67.71 ? C7 PG4 604 A 1 HETATM 12 C C8 PG4 . . . F 4 19.688 11.109 -15.016 1 66.33 ? C8 PG4 604 A 1 HETATM 13 O O5 PG4 . . . F 4 19.066 10.522 -13.847 1 65.55 ? O5 PG4 604 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #