data_5EIK # _model_server_result.job_id 9kBOrvENw31IoOhDVCfsxA _model_server_result.datetime_utc '2024-11-26 20:43:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 5EIK # _exptl.entry_id 5EIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5EIK _cell.length_a 126.34 _cell.length_b 126.34 _cell.length_c 135.57 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CE1 TYR 21 A TYR 21 1_555 K O6 DMU . A DMU 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.53 ? metalc ? metalc1 D MG MG . A MG 303 1_555 N O HOH . A HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 D MG MG . A MG 303 1_555 N O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc3 D MG MG . A MG 303 1_555 N O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5EIK _atom_sites.fract_transf_matrix[1][1] 0.007915 _atom_sites.fract_transf_matrix[1][2] 0.00457 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007376 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT5 A 1 301 185 PT5 PIO . C 3 CPL A 1 302 640 CPL CPL . D 4 MG A 1 303 1 MG MG2 . E 5 ACT A 1 304 1 ACT ACT . F 5 ACT A 1 305 2 ACT ACT . G 5 ACT A 1 306 3 ACT ACT . H 5 ACT A 1 307 4 ACT ACT . I 5 ACT A 1 308 5 ACT ACT . J 6 DMU A 1 309 1 DMU DMU . K 6 DMU A 1 310 2 DMU DMU . L 6 DMU A 1 311 3 DMU DMU . M 6 DMU A 1 312 4 DMU DMU . N 7 HOH A 1 401 4 HOH WAT . N 7 HOH A 2 402 22 HOH WAT . N 7 HOH A 3 403 50 HOH WAT . N 7 HOH A 4 404 52 HOH WAT . N 7 HOH A 5 405 23 HOH WAT . N 7 HOH A 6 406 31 HOH WAT . N 7 HOH A 7 407 99 HOH WAT . N 7 HOH A 8 408 110 HOH WAT . N 7 HOH A 9 409 69 HOH WAT . N 7 HOH A 10 410 103 HOH WAT . N 7 HOH A 11 411 90 HOH WAT . N 7 HOH A 12 412 108 HOH WAT . N 7 HOH A 13 413 98 HOH WAT . N 7 HOH A 14 414 13 HOH WAT . N 7 HOH A 15 415 101 HOH WAT . N 7 HOH A 16 416 73 HOH WAT . N 7 HOH A 17 417 32 HOH WAT . N 7 HOH A 18 418 20 HOH WAT . N 7 HOH A 19 419 85 HOH WAT . N 7 HOH A 20 420 55 HOH WAT . N 7 HOH A 21 421 19 HOH WAT . N 7 HOH A 22 422 18 HOH WAT . N 7 HOH A 23 423 111 HOH WAT . N 7 HOH A 24 424 42 HOH WAT . N 7 HOH A 25 425 41 HOH WAT . N 7 HOH A 26 426 84 HOH WAT . N 7 HOH A 27 427 47 HOH WAT . N 7 HOH A 28 428 5 HOH WAT . N 7 HOH A 29 429 17 HOH WAT . N 7 HOH A 30 430 9 HOH WAT . N 7 HOH A 31 431 45 HOH WAT . N 7 HOH A 32 432 125 HOH HOH . N 7 HOH A 33 433 112 HOH WAT . N 7 HOH A 34 434 100 HOH WAT . N 7 HOH A 35 435 115 HOH WAT . N 7 HOH A 36 436 10 HOH WAT . N 7 HOH A 37 437 104 HOH WAT . N 7 HOH A 38 438 87 HOH WAT . N 7 HOH A 39 439 86 HOH WAT . N 7 HOH A 40 440 119 HOH WAT . N 7 HOH A 41 441 53 HOH WAT . N 7 HOH A 42 442 83 HOH WAT . N 7 HOH A 43 443 93 HOH WAT . N 7 HOH A 44 444 63 HOH WAT . N 7 HOH A 45 445 81 HOH WAT . N 7 HOH A 46 446 8 HOH WAT . N 7 HOH A 47 447 114 HOH WAT . N 7 HOH A 48 448 6 HOH WAT . N 7 HOH A 49 449 91 HOH WAT . N 7 HOH A 50 450 109 HOH WAT . N 7 HOH A 51 451 11 HOH WAT . N 7 HOH A 52 452 51 HOH WAT . N 7 HOH A 53 453 2 HOH WAT . N 7 HOH A 54 454 97 HOH WAT . N 7 HOH A 55 455 92 HOH WAT . N 7 HOH A 56 456 116 HOH WAT . N 7 HOH A 57 457 76 HOH WAT . N 7 HOH A 58 458 89 HOH WAT . N 7 HOH A 59 459 106 HOH WAT . N 7 HOH A 60 460 46 HOH WAT . N 7 HOH A 61 461 113 HOH WAT . N 7 HOH A 62 462 14 HOH WAT . N 7 HOH A 63 463 105 HOH WAT . N 7 HOH A 64 464 1 HOH WAT . N 7 HOH A 65 465 68 HOH WAT . N 7 HOH A 66 466 123 HOH WAT . N 7 HOH A 67 467 67 HOH WAT . N 7 HOH A 68 468 77 HOH WAT . N 7 HOH A 69 469 34 HOH WAT . N 7 HOH A 70 470 128 HOH HOH . N 7 HOH A 71 471 117 HOH WAT . N 7 HOH A 72 472 96 HOH WAT . N 7 HOH A 73 473 70 HOH WAT . N 7 HOH A 74 474 126 HOH HOH . N 7 HOH A 75 475 120 HOH WAT . N 7 HOH A 76 476 7 HOH WAT . N 7 HOH A 77 477 121 HOH WAT . N 7 HOH A 78 478 79 HOH WAT . N 7 HOH A 79 479 95 HOH WAT . N 7 HOH A 80 480 124 HOH HOH . N 7 HOH A 81 481 58 HOH WAT . N 7 HOH A 82 482 80 HOH WAT . N 7 HOH A 83 483 122 HOH WAT . N 7 HOH A 84 484 48 HOH WAT . N 7 HOH A 85 485 72 HOH WAT . N 7 HOH A 86 486 94 HOH WAT . N 7 HOH A 87 487 75 HOH WAT . N 7 HOH A 88 488 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . I 5 -15.329 19.605 14.949 1 119.03 ? C ACT 308 A 1 HETATM 2 O O ACT . . . I 5 -15.816 20.552 14.352 1 119.95 ? O ACT 308 A 1 HETATM 3 O OXT ACT . . . I 5 -14.28 19.745 15.561 1 118.38 ? OXT ACT 308 A 1 HETATM 4 C CH3 ACT . . . I 5 -16.023 18.265 14.931 1 115.95 ? CH3 ACT 308 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #