data_5EIS # _model_server_result.job_id 8UqNWTfMibBNZKUSLwbtjw _model_server_result.datetime_utc '2024-11-22 20:48:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eis # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5EIS # _exptl.entry_id 5EIS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation NO _entity.pdbx_fragment 'N-TERMINAL BROMODOMAIN, RESIDUES 42-168' _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EIS _cell.length_a 35.935 _cell.length_b 46.545 _cell.length_c 77.658 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EIS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 119 n n C1 C2 EDO sing 120 n n C1 H11 EDO sing 121 n n C1 H12 EDO sing 122 n n O1 HO1 EDO sing 123 n n C2 O2 EDO sing 124 n n C2 H21 EDO sing 125 n n C2 H22 EDO sing 126 n n O2 HO2 EDO sing 127 n n # _atom_sites.entry_id 5EIS _atom_sites.fract_transf_matrix[1][1] 0.027828 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5OU A 1 201 1 5OU DRG . C 3 EDO A 1 202 1 EDO EDO . D 3 EDO A 1 203 2 EDO EDO . E 4 HOH A 1 301 103 HOH HOH . E 4 HOH A 2 302 100 HOH HOH . E 4 HOH A 3 303 66 HOH HOH . E 4 HOH A 4 304 81 HOH HOH . E 4 HOH A 5 305 83 HOH HOH . E 4 HOH A 6 306 95 HOH HOH . E 4 HOH A 7 307 98 HOH HOH . E 4 HOH A 8 308 3 HOH HOH . E 4 HOH A 9 309 28 HOH HOH . E 4 HOH A 10 310 62 HOH HOH . E 4 HOH A 11 311 18 HOH HOH . E 4 HOH A 12 312 101 HOH HOH . E 4 HOH A 13 313 91 HOH HOH . E 4 HOH A 14 314 23 HOH HOH . E 4 HOH A 15 315 61 HOH HOH . E 4 HOH A 16 316 44 HOH HOH . E 4 HOH A 17 317 9 HOH HOH . E 4 HOH A 18 318 16 HOH HOH . E 4 HOH A 19 319 8 HOH HOH . E 4 HOH A 20 320 22 HOH HOH . E 4 HOH A 21 321 15 HOH HOH . E 4 HOH A 22 322 34 HOH HOH . E 4 HOH A 23 323 24 HOH HOH . E 4 HOH A 24 324 104 HOH HOH . E 4 HOH A 25 325 6 HOH HOH . E 4 HOH A 26 326 40 HOH HOH . E 4 HOH A 27 327 57 HOH HOH . E 4 HOH A 28 328 21 HOH HOH . E 4 HOH A 29 329 4 HOH HOH . E 4 HOH A 30 330 1 HOH HOH . E 4 HOH A 31 331 93 HOH HOH . E 4 HOH A 32 332 56 HOH HOH . E 4 HOH A 33 333 41 HOH HOH . E 4 HOH A 34 334 26 HOH HOH . E 4 HOH A 35 335 51 HOH HOH . E 4 HOH A 36 336 42 HOH HOH . E 4 HOH A 37 337 45 HOH HOH . E 4 HOH A 38 338 13 HOH HOH . E 4 HOH A 39 339 39 HOH HOH . E 4 HOH A 40 340 33 HOH HOH . E 4 HOH A 41 341 69 HOH HOH . E 4 HOH A 42 342 97 HOH HOH . E 4 HOH A 43 343 12 HOH HOH . E 4 HOH A 44 344 88 HOH HOH . E 4 HOH A 45 345 47 HOH HOH . E 4 HOH A 46 346 17 HOH HOH . E 4 HOH A 47 347 2 HOH HOH . E 4 HOH A 48 348 32 HOH HOH . E 4 HOH A 49 349 48 HOH HOH . E 4 HOH A 50 350 38 HOH HOH . E 4 HOH A 51 351 14 HOH HOH . E 4 HOH A 52 352 80 HOH HOH . E 4 HOH A 53 353 7 HOH HOH . E 4 HOH A 54 354 35 HOH HOH . E 4 HOH A 55 355 74 HOH HOH . E 4 HOH A 56 356 31 HOH HOH . E 4 HOH A 57 357 20 HOH HOH . E 4 HOH A 58 358 11 HOH HOH . E 4 HOH A 59 359 49 HOH HOH . E 4 HOH A 60 360 25 HOH HOH . E 4 HOH A 61 361 30 HOH HOH . E 4 HOH A 62 362 19 HOH HOH . E 4 HOH A 63 363 72 HOH HOH . E 4 HOH A 64 364 102 HOH HOH . E 4 HOH A 65 365 64 HOH HOH . E 4 HOH A 66 366 79 HOH HOH . E 4 HOH A 67 367 53 HOH HOH . E 4 HOH A 68 368 27 HOH HOH . E 4 HOH A 69 369 85 HOH HOH . E 4 HOH A 70 370 71 HOH HOH . E 4 HOH A 71 371 58 HOH HOH . E 4 HOH A 72 372 65 HOH HOH . E 4 HOH A 73 373 92 HOH HOH . E 4 HOH A 74 374 5 HOH HOH . E 4 HOH A 75 375 10 HOH HOH . E 4 HOH A 76 376 29 HOH HOH . E 4 HOH A 77 377 37 HOH HOH . E 4 HOH A 78 378 77 HOH HOH . E 4 HOH A 79 379 70 HOH HOH . E 4 HOH A 80 380 55 HOH HOH . E 4 HOH A 81 381 76 HOH HOH . E 4 HOH A 82 382 90 HOH HOH . E 4 HOH A 83 383 89 HOH HOH . E 4 HOH A 84 384 99 HOH HOH . E 4 HOH A 85 385 87 HOH HOH . E 4 HOH A 86 386 54 HOH HOH . E 4 HOH A 87 387 36 HOH HOH . E 4 HOH A 88 388 94 HOH HOH . E 4 HOH A 89 389 46 HOH HOH . E 4 HOH A 90 390 50 HOH HOH . E 4 HOH A 91 391 73 HOH HOH . E 4 HOH A 92 392 75 HOH HOH . E 4 HOH A 93 393 60 HOH HOH . E 4 HOH A 94 394 52 HOH HOH . E 4 HOH A 95 395 67 HOH HOH . E 4 HOH A 96 396 78 HOH HOH . E 4 HOH A 97 397 82 HOH HOH . E 4 HOH A 98 398 63 HOH HOH . E 4 HOH A 99 399 59 HOH HOH . E 4 HOH A 100 400 96 HOH HOH . E 4 HOH A 101 401 86 HOH HOH . E 4 HOH A 102 402 68 HOH HOH . E 4 HOH A 103 403 43 HOH HOH . E 4 HOH A 104 404 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -23.367 -5.536 65.97 1 38.69 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 3 -23.464 -5.853 67.365 1 37.28 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 3 -23.78 -6.735 65.169 1 48.04 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 3 -25.129 -6.556 64.703 1 48.75 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #