data_5EJ0
#
_model_server_result.job_id            nibUj4bQBMiFrCwKlzQkyQ 
_model_server_result.datetime_utc      '2025-04-02 01:23:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ej0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    5EJ0 
#
_exptl.entry_id    5EJ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              77.149 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-ETHANETHIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EJ0 
_cell.length_a            42.36 
_cell.length_b            54.79 
_cell.length_c            111.99 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EJ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 87 A CYS 90 1_555 B SG DHL . A DHL 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc1 A OE1 GLU 122 A GLU 125 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc2 A OD1 ASP 124 A ASP 127 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc3 A OG SER 183 A SER 186 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? 
metalc ? metalc4 K O1 PDO . A PDO 710 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? 
#
_chem_comp.formula           'C2 H7 N S' 
_chem_comp.formula_weight    77.149 
_chem_comp.id                DHL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-ETHANETHIOL 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     2,3-DESHYDROLANTHIONINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA DHL sing 83 n n 
N HN1 DHL sing 84 n n 
N HN2 DHL sing 85 n n 
CA CB DHL sing 86 n n 
CA HA2 DHL sing 87 n n 
CA HA3 DHL sing 88 n n 
CB SG DHL sing 89 n n 
CB HB2 DHL sing 90 n n 
CB HB3 DHL sing 91 n n 
SG HS DHL sing 92 n n 
#
_atom_sites.entry_id                     5EJ0 
_atom_sites.fract_transf_matrix[1][1]    0.023607 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018252 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008929 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DHL A 1 701 701 DHL DHL . 
C 3 PG0 A 1 702 702 PG0 PG0 . 
D 3 PG0 A 1 703 703 PG0 PG0 . 
E 3 PG0 A 1 704 704 PG0 PG0 . 
F 3 PG0 A 1 705 705 PG0 PG0 . 
G 4 GOL A 1 706 706 GOL GOL . 
H 4 GOL A 1 707 707 GOL GOL . 
I 5 POL A 1 708 708 POL POL . 
J 6 PDO A 1 709 709 PDO PDO . 
K 6 PDO A 1 710 710 PDO PDO . 
L 7 EDO A 1 711 711 EDO EDO . 
M 7 EDO A 1 712 712 EDO EDO . 
N 7 EDO A 1 713 713 EDO EDO . 
O 7 EDO A 1 714 714 EDO EDO . 
P 7 EDO A 1 715 715 EDO EDO . 
Q 8 EOH A 1 716 716 EOH EOH . 
R 8 EOH A 1 717 717 EOH EOH . 
S 8 EOH A 1 718 718 EOH EOH . 
T 9 MOH A 1 719 719 MOH MOH . 
U 9 MOH A 1 720 720 MOH MOH . 
V 9 MOH A 1 721 721 MOH MOH . 
W 9 MOH A 1 722 722 MOH MOH . 
X 9 MOH A 1 723 723 MOH MOH . 
Y 9 MOH A 1 724 724 MOH MOH . 
Z 10 MG A 1 725 726 MG MG . 
AA 11 HOH A 1 801 559 HOH HOH . 
AA 11 HOH A 2 802 537 HOH HOH . 
AA 11 HOH A 3 803 560 HOH HOH . 
AA 11 HOH A 4 804 558 HOH HOH . 
AA 11 HOH A 5 805 555 HOH HOH . 
AA 11 HOH A 6 806 591 HOH HOH . 
AA 11 HOH A 7 807 586 HOH HOH . 
AA 11 HOH A 8 808 583 HOH HOH . 
AA 11 HOH A 9 809 540 HOH HOH . 
AA 11 HOH A 10 810 511 HOH HOH . 
AA 11 HOH A 11 811 527 HOH HOH . 
AA 11 HOH A 12 812 509 HOH HOH . 
AA 11 HOH A 13 813 571 HOH HOH . 
AA 11 HOH A 14 814 587 HOH HOH . 
AA 11 HOH A 15 815 524 HOH HOH . 
AA 11 HOH A 16 816 514 HOH HOH . 
AA 11 HOH A 17 817 539 HOH HOH . 
AA 11 HOH A 18 818 552 HOH HOH . 
AA 11 HOH A 19 819 562 HOH HOH . 
AA 11 HOH A 20 820 581 HOH HOH . 
AA 11 HOH A 21 821 504 HOH HOH . 
AA 11 HOH A 22 822 515 HOH HOH . 
AA 11 HOH A 23 823 567 HOH HOH . 
AA 11 HOH A 24 824 534 HOH HOH . 
AA 11 HOH A 25 825 561 HOH HOH . 
AA 11 HOH A 26 826 588 HOH HOH . 
AA 11 HOH A 27 827 518 HOH HOH . 
AA 11 HOH A 28 828 506 HOH HOH . 
AA 11 HOH A 29 829 578 HOH HOH . 
AA 11 HOH A 30 830 501 HOH HOH . 
AA 11 HOH A 31 831 564 HOH HOH . 
AA 11 HOH A 32 832 549 HOH HOH . 
AA 11 HOH A 33 833 551 HOH HOH . 
AA 11 HOH A 34 834 523 HOH HOH . 
AA 11 HOH A 35 835 550 HOH HOH . 
AA 11 HOH A 36 836 556 HOH HOH . 
AA 11 HOH A 37 837 545 HOH HOH . 
AA 11 HOH A 38 838 538 HOH HOH . 
AA 11 HOH A 39 839 536 HOH HOH . 
AA 11 HOH A 40 840 563 HOH HOH . 
AA 11 HOH A 41 841 535 HOH HOH . 
AA 11 HOH A 42 842 530 HOH HOH . 
AA 11 HOH A 43 843 532 HOH HOH . 
AA 11 HOH A 44 844 573 HOH HOH . 
AA 11 HOH A 45 845 553 HOH HOH . 
AA 11 HOH A 46 846 502 HOH HOH . 
AA 11 HOH A 47 847 510 HOH HOH . 
AA 11 HOH A 48 848 520 HOH HOH . 
AA 11 HOH A 49 849 508 HOH HOH . 
AA 11 HOH A 50 850 557 HOH HOH . 
AA 11 HOH A 51 851 565 HOH HOH . 
AA 11 HOH A 52 852 533 HOH HOH . 
AA 11 HOH A 53 853 589 HOH HOH . 
AA 11 HOH A 54 854 582 HOH HOH . 
AA 11 HOH A 55 855 505 HOH HOH . 
AA 11 HOH A 56 856 543 HOH HOH . 
AA 11 HOH A 57 857 574 HOH HOH . 
AA 11 HOH A 58 858 517 HOH HOH . 
AA 11 HOH A 59 859 516 HOH HOH . 
AA 11 HOH A 60 860 507 HOH HOH . 
AA 11 HOH A 61 861 547 HOH HOH . 
AA 11 HOH A 62 862 568 HOH HOH . 
AA 11 HOH A 63 863 519 HOH HOH . 
AA 11 HOH A 64 864 575 HOH HOH . 
AA 11 HOH A 65 865 513 HOH HOH . 
AA 11 HOH A 66 866 528 HOH HOH . 
AA 11 HOH A 67 867 503 HOH HOH . 
AA 11 HOH A 68 868 576 HOH HOH . 
AA 11 HOH A 69 869 572 HOH HOH . 
AA 11 HOH A 70 870 521 HOH HOH . 
AA 11 HOH A 71 871 544 HOH HOH . 
AA 11 HOH A 72 872 566 HOH HOH . 
AA 11 HOH A 73 873 579 HOH HOH . 
AA 11 HOH A 74 874 548 HOH HOH . 
AA 11 HOH A 75 875 541 HOH HOH . 
AA 11 HOH A 76 876 525 HOH HOH . 
AA 11 HOH A 77 877 584 HOH HOH . 
AA 11 HOH A 78 878 512 HOH HOH . 
AA 11 HOH A 79 879 577 HOH HOH . 
AA 11 HOH A 80 880 531 HOH HOH . 
AA 11 HOH A 81 881 569 HOH HOH . 
AA 11 HOH A 82 882 580 HOH HOH . 
AA 11 HOH A 83 883 522 HOH HOH . 
AA 11 HOH A 84 884 570 HOH HOH . 
AA 11 HOH A 85 885 554 HOH HOH . 
AA 11 HOH A 86 886 590 HOH HOH . 
AA 11 HOH A 87 887 546 HOH HOH . 
AA 11 HOH A 88 888 542 HOH HOH . 
AA 11 HOH A 89 889 529 HOH HOH . 
AA 11 HOH A 90 890 585 HOH HOH . 
AA 11 HOH A 91 891 526 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N DHL . A . B 2 21.236 27.471 65.139 0.5 45.05 ? N DHL 701 A 1 
HETATM 2 N N DHL . B . B 2 19.807 26.815 63.483 0.5 48.31 ? N DHL 701 A 1 
HETATM 3 C CA DHL . . . B 2 19.974 27.729 64.552 1 49.28 ? CA DHL 701 A 1 
HETATM 4 C CB DHL . . . B 2 19.842 29.186 64.136 1 45.76 ? CB DHL 701 A 1 
HETATM 5 S SG DHL . . . B 2 19.698 29.396 62.37 1 53.48 ? SG DHL 701 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           36 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#