data_5EJ0 # _model_server_result.job_id qRcWLam-sjvySkvYv2JO7A _model_server_result.datetime_utc '2025-04-02 11:08:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ej0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 5EJ0 # _exptl.entry_id 5EJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 120.147 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-METHOXYETHOXY)ETHANOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EJ0 _cell.length_a 42.36 _cell.length_b 54.79 _cell.length_c 111.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 87 A CYS 90 1_555 B SG DHL . A DHL 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc1 A OE1 GLU 122 A GLU 125 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc2 A OD1 ASP 124 A ASP 127 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc3 A OG SER 183 A SER 186 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc4 K O1 PDO . A PDO 710 1_555 Z MG MG . A MG 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? # _chem_comp.formula 'C5 H12 O3' _chem_comp.formula_weight 120.147 _chem_comp.id PG0 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-METHOXYETHOXY)ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PEG 6000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 O2 PG0 sing 294 n n C5 H51 PG0 sing 295 n n C5 H52 PG0 sing 296 n n C5 H53 PG0 sing 297 n n O2 C4 PG0 sing 298 n n C4 C3 PG0 sing 299 n n C4 H41 PG0 sing 300 n n C4 H42 PG0 sing 301 n n C3 O1 PG0 sing 302 n n C3 H31 PG0 sing 303 n n C3 H32 PG0 sing 304 n n O1 C2 PG0 sing 305 n n C2 C1 PG0 sing 306 n n C2 H21 PG0 sing 307 n n C2 H22 PG0 sing 308 n n C1 OTT PG0 sing 309 n n C1 H11 PG0 sing 310 n n C1 H12 PG0 sing 311 n n OTT HTT PG0 sing 312 n n # _atom_sites.entry_id 5EJ0 _atom_sites.fract_transf_matrix[1][1] 0.023607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018252 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008929 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DHL A 1 701 701 DHL DHL . C 3 PG0 A 1 702 702 PG0 PG0 . D 3 PG0 A 1 703 703 PG0 PG0 . E 3 PG0 A 1 704 704 PG0 PG0 . F 3 PG0 A 1 705 705 PG0 PG0 . G 4 GOL A 1 706 706 GOL GOL . H 4 GOL A 1 707 707 GOL GOL . I 5 POL A 1 708 708 POL POL . J 6 PDO A 1 709 709 PDO PDO . K 6 PDO A 1 710 710 PDO PDO . L 7 EDO A 1 711 711 EDO EDO . M 7 EDO A 1 712 712 EDO EDO . N 7 EDO A 1 713 713 EDO EDO . O 7 EDO A 1 714 714 EDO EDO . P 7 EDO A 1 715 715 EDO EDO . Q 8 EOH A 1 716 716 EOH EOH . R 8 EOH A 1 717 717 EOH EOH . S 8 EOH A 1 718 718 EOH EOH . T 9 MOH A 1 719 719 MOH MOH . U 9 MOH A 1 720 720 MOH MOH . V 9 MOH A 1 721 721 MOH MOH . W 9 MOH A 1 722 722 MOH MOH . X 9 MOH A 1 723 723 MOH MOH . Y 9 MOH A 1 724 724 MOH MOH . Z 10 MG A 1 725 726 MG MG . AA 11 HOH A 1 801 559 HOH HOH . AA 11 HOH A 2 802 537 HOH HOH . AA 11 HOH A 3 803 560 HOH HOH . AA 11 HOH A 4 804 558 HOH HOH . AA 11 HOH A 5 805 555 HOH HOH . AA 11 HOH A 6 806 591 HOH HOH . AA 11 HOH A 7 807 586 HOH HOH . AA 11 HOH A 8 808 583 HOH HOH . AA 11 HOH A 9 809 540 HOH HOH . AA 11 HOH A 10 810 511 HOH HOH . AA 11 HOH A 11 811 527 HOH HOH . AA 11 HOH A 12 812 509 HOH HOH . AA 11 HOH A 13 813 571 HOH HOH . AA 11 HOH A 14 814 587 HOH HOH . AA 11 HOH A 15 815 524 HOH HOH . AA 11 HOH A 16 816 514 HOH HOH . AA 11 HOH A 17 817 539 HOH HOH . AA 11 HOH A 18 818 552 HOH HOH . AA 11 HOH A 19 819 562 HOH HOH . AA 11 HOH A 20 820 581 HOH HOH . AA 11 HOH A 21 821 504 HOH HOH . AA 11 HOH A 22 822 515 HOH HOH . AA 11 HOH A 23 823 567 HOH HOH . AA 11 HOH A 24 824 534 HOH HOH . AA 11 HOH A 25 825 561 HOH HOH . AA 11 HOH A 26 826 588 HOH HOH . AA 11 HOH A 27 827 518 HOH HOH . AA 11 HOH A 28 828 506 HOH HOH . AA 11 HOH A 29 829 578 HOH HOH . AA 11 HOH A 30 830 501 HOH HOH . AA 11 HOH A 31 831 564 HOH HOH . AA 11 HOH A 32 832 549 HOH HOH . AA 11 HOH A 33 833 551 HOH HOH . AA 11 HOH A 34 834 523 HOH HOH . AA 11 HOH A 35 835 550 HOH HOH . AA 11 HOH A 36 836 556 HOH HOH . AA 11 HOH A 37 837 545 HOH HOH . AA 11 HOH A 38 838 538 HOH HOH . AA 11 HOH A 39 839 536 HOH HOH . AA 11 HOH A 40 840 563 HOH HOH . AA 11 HOH A 41 841 535 HOH HOH . AA 11 HOH A 42 842 530 HOH HOH . AA 11 HOH A 43 843 532 HOH HOH . AA 11 HOH A 44 844 573 HOH HOH . AA 11 HOH A 45 845 553 HOH HOH . AA 11 HOH A 46 846 502 HOH HOH . AA 11 HOH A 47 847 510 HOH HOH . AA 11 HOH A 48 848 520 HOH HOH . AA 11 HOH A 49 849 508 HOH HOH . AA 11 HOH A 50 850 557 HOH HOH . AA 11 HOH A 51 851 565 HOH HOH . AA 11 HOH A 52 852 533 HOH HOH . AA 11 HOH A 53 853 589 HOH HOH . AA 11 HOH A 54 854 582 HOH HOH . AA 11 HOH A 55 855 505 HOH HOH . AA 11 HOH A 56 856 543 HOH HOH . AA 11 HOH A 57 857 574 HOH HOH . AA 11 HOH A 58 858 517 HOH HOH . AA 11 HOH A 59 859 516 HOH HOH . AA 11 HOH A 60 860 507 HOH HOH . AA 11 HOH A 61 861 547 HOH HOH . AA 11 HOH A 62 862 568 HOH HOH . AA 11 HOH A 63 863 519 HOH HOH . AA 11 HOH A 64 864 575 HOH HOH . AA 11 HOH A 65 865 513 HOH HOH . AA 11 HOH A 66 866 528 HOH HOH . AA 11 HOH A 67 867 503 HOH HOH . AA 11 HOH A 68 868 576 HOH HOH . AA 11 HOH A 69 869 572 HOH HOH . AA 11 HOH A 70 870 521 HOH HOH . AA 11 HOH A 71 871 544 HOH HOH . AA 11 HOH A 72 872 566 HOH HOH . AA 11 HOH A 73 873 579 HOH HOH . AA 11 HOH A 74 874 548 HOH HOH . AA 11 HOH A 75 875 541 HOH HOH . AA 11 HOH A 76 876 525 HOH HOH . AA 11 HOH A 77 877 584 HOH HOH . AA 11 HOH A 78 878 512 HOH HOH . AA 11 HOH A 79 879 577 HOH HOH . AA 11 HOH A 80 880 531 HOH HOH . AA 11 HOH A 81 881 569 HOH HOH . AA 11 HOH A 82 882 580 HOH HOH . AA 11 HOH A 83 883 522 HOH HOH . AA 11 HOH A 84 884 570 HOH HOH . AA 11 HOH A 85 885 554 HOH HOH . AA 11 HOH A 86 886 590 HOH HOH . AA 11 HOH A 87 887 546 HOH HOH . AA 11 HOH A 88 888 542 HOH HOH . AA 11 HOH A 89 889 529 HOH HOH . AA 11 HOH A 90 890 585 HOH HOH . AA 11 HOH A 91 891 526 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 PG0 . . . F 3 31.382 52.501 49.112 1 60.03 ? C5 PG0 705 A 1 HETATM 2 O O2 PG0 . . . F 3 32.282 51.558 48.528 1 61.39 ? O2 PG0 705 A 1 HETATM 3 C C4 PG0 . . . F 3 31.556 50.338 48.37 1 41.98 ? C4 PG0 705 A 1 HETATM 4 C C3 PG0 . . . F 3 32.538 49.185 48.149 1 46.38 ? C3 PG0 705 A 1 HETATM 5 O O1 PG0 . . . F 3 31.809 47.982 47.892 1 43.89 ? O1 PG0 705 A 1 HETATM 6 C C2 PG0 . . . F 3 32.771 46.982 47.552 1 36.48 ? C2 PG0 705 A 1 HETATM 7 C C1 PG0 . . . F 3 32.73 45.859 48.59 1 31.38 ? C1 PG0 705 A 1 HETATM 8 O OTT PG0 . . . F 3 33.671 44.845 48.233 1 33.55 ? OTT PG0 705 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 138 _model_server_stats.create_model_time_ms 96 _model_server_stats.query_time_ms 384 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #