data_5EKJ # _model_server_result.job_id A4OUXLPeAbbF57ZLop7Vsw _model_server_result.datetime_utc '2024-11-16 10:07:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ekj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5EKJ # _exptl.entry_id 5EKJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.15 _cell.angle_gamma 90 _cell.entry_id 5EKJ _cell.length_a 42.35 _cell.length_b 41.35 _cell.length_c 72.13 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EKJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 73 A SER 73 1_555 E NA NA . A NA 304 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc2 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc3 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc4 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 A OG SER 219 A SER 220 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc6 B ZN ZN . A ZN 301 1_555 D N17 TG4 . A TG4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc7 E NA NA . A NA 304 1_555 F O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc8 E NA NA . A NA 304 1_555 F O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc9 E NA NA . A NA 304 1_555 F O HOH . A HOH 480 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc10 E NA NA . A NA 304 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EKJ _atom_sites.fract_transf_matrix[1][1] 0.023613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005953 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 1 ZN ZN . C 3 GOL A 1 302 1 GOL GOL . D 4 TG4 A 1 303 1 TG4 TG4 . E 5 NA A 1 304 1 NA NA . F 6 HOH A 1 401 203 HOH HOH . F 6 HOH A 2 402 134 HOH HOH . F 6 HOH A 3 403 68 HOH HOH . F 6 HOH A 4 404 258 HOH HOH . F 6 HOH A 5 405 144 HOH HOH . F 6 HOH A 6 406 125 HOH HOH . F 6 HOH A 7 407 264 HOH HOH . F 6 HOH A 8 408 267 HOH HOH . F 6 HOH A 9 409 80 HOH HOH . F 6 HOH A 10 410 259 HOH HOH . F 6 HOH A 11 411 265 HOH HOH . F 6 HOH A 12 412 101 HOH HOH . F 6 HOH A 13 413 260 HOH HOH . F 6 HOH A 14 414 137 HOH HOH . F 6 HOH A 15 415 251 HOH HOH . F 6 HOH A 16 416 60 HOH HOH . F 6 HOH A 17 417 263 HOH HOH . F 6 HOH A 18 418 269 HOH HOH . F 6 HOH A 19 419 2 HOH HOH . F 6 HOH A 20 420 196 HOH HOH . F 6 HOH A 21 421 232 HOH HOH . F 6 HOH A 22 422 1 HOH HOH . F 6 HOH A 23 423 18 HOH HOH . F 6 HOH A 24 424 182 HOH HOH . F 6 HOH A 25 425 40 HOH HOH . F 6 HOH A 26 426 52 HOH HOH . F 6 HOH A 27 427 71 HOH HOH . F 6 HOH A 28 428 146 HOH HOH . F 6 HOH A 29 429 256 HOH HOH . F 6 HOH A 30 430 277 HOH HOH . F 6 HOH A 31 431 20 HOH HOH . F 6 HOH A 32 432 38 HOH HOH . F 6 HOH A 33 433 33 HOH HOH . F 6 HOH A 34 434 91 HOH HOH . F 6 HOH A 35 435 138 HOH HOH . F 6 HOH A 36 436 108 HOH HOH . F 6 HOH A 37 437 77 HOH HOH . F 6 HOH A 38 438 124 HOH HOH . F 6 HOH A 39 439 168 HOH HOH . F 6 HOH A 40 440 129 HOH HOH . F 6 HOH A 41 441 133 HOH HOH . F 6 HOH A 42 442 128 HOH HOH . F 6 HOH A 43 443 135 HOH HOH . F 6 HOH A 44 444 185 HOH HOH . F 6 HOH A 45 445 173 HOH HOH . F 6 HOH A 46 446 253 HOH HOH . F 6 HOH A 47 447 7 HOH HOH . F 6 HOH A 48 448 176 HOH HOH . F 6 HOH A 49 449 175 HOH HOH . F 6 HOH A 50 450 65 HOH HOH . F 6 HOH A 51 451 103 HOH HOH . F 6 HOH A 52 452 22 HOH HOH . F 6 HOH A 53 453 152 HOH HOH . F 6 HOH A 54 454 149 HOH HOH . F 6 HOH A 55 455 14 HOH HOH . F 6 HOH A 56 456 62 HOH HOH . F 6 HOH A 57 457 249 HOH HOH . F 6 HOH A 58 458 218 HOH HOH . F 6 HOH A 59 459 246 HOH HOH . F 6 HOH A 60 460 11 HOH HOH . F 6 HOH A 61 461 23 HOH HOH . F 6 HOH A 62 462 187 HOH HOH . F 6 HOH A 63 463 245 HOH HOH . F 6 HOH A 64 464 89 HOH HOH . F 6 HOH A 65 465 120 HOH HOH . F 6 HOH A 66 466 160 HOH HOH . F 6 HOH A 67 467 86 HOH HOH . F 6 HOH A 68 468 9 HOH HOH . F 6 HOH A 69 469 56 HOH HOH . F 6 HOH A 70 470 39 HOH HOH . F 6 HOH A 71 471 16 HOH HOH . F 6 HOH A 72 472 100 HOH HOH . F 6 HOH A 73 473 17 HOH HOH . F 6 HOH A 74 474 74 HOH HOH . F 6 HOH A 75 475 262 HOH HOH . F 6 HOH A 76 476 171 HOH HOH . F 6 HOH A 77 477 127 HOH HOH . F 6 HOH A 78 478 229 HOH HOH . F 6 HOH A 79 479 186 HOH HOH . F 6 HOH A 80 480 248 HOH HOH . F 6 HOH A 81 481 233 HOH HOH . F 6 HOH A 82 482 191 HOH HOH . F 6 HOH A 83 483 219 HOH HOH . F 6 HOH A 84 484 30 HOH HOH . F 6 HOH A 85 485 94 HOH HOH . F 6 HOH A 86 486 99 HOH HOH . F 6 HOH A 87 487 5 HOH HOH . F 6 HOH A 88 488 266 HOH HOH . F 6 HOH A 89 489 15 HOH HOH . F 6 HOH A 90 490 207 HOH HOH . F 6 HOH A 91 491 3 HOH HOH . F 6 HOH A 92 492 4 HOH HOH . F 6 HOH A 93 493 35 HOH HOH . F 6 HOH A 94 494 228 HOH HOH . F 6 HOH A 95 495 46 HOH HOH . F 6 HOH A 96 496 224 HOH HOH . F 6 HOH A 97 497 29 HOH HOH . F 6 HOH A 98 498 155 HOH HOH . F 6 HOH A 99 499 268 HOH HOH . F 6 HOH A 100 500 64 HOH HOH . F 6 HOH A 101 501 95 HOH HOH . F 6 HOH A 102 502 8 HOH HOH . F 6 HOH A 103 503 28 HOH HOH . F 6 HOH A 104 504 12 HOH HOH . F 6 HOH A 105 505 51 HOH HOH . F 6 HOH A 106 506 10 HOH HOH . F 6 HOH A 107 507 254 HOH HOH . F 6 HOH A 108 508 32 HOH HOH . F 6 HOH A 109 509 222 HOH HOH . F 6 HOH A 110 510 274 HOH HOH . F 6 HOH A 111 511 271 HOH HOH . F 6 HOH A 112 512 255 HOH HOH . F 6 HOH A 113 513 34 HOH HOH . F 6 HOH A 114 514 44 HOH HOH . F 6 HOH A 115 515 24 HOH HOH . F 6 HOH A 116 516 55 HOH HOH . F 6 HOH A 117 517 57 HOH HOH . F 6 HOH A 118 518 93 HOH HOH . F 6 HOH A 119 519 6 HOH HOH . F 6 HOH A 120 520 170 HOH HOH . F 6 HOH A 121 521 43 HOH HOH . F 6 HOH A 122 522 130 HOH HOH . F 6 HOH A 123 523 183 HOH HOH . F 6 HOH A 124 524 156 HOH HOH . F 6 HOH A 125 525 179 HOH HOH . F 6 HOH A 126 526 244 HOH HOH . F 6 HOH A 127 527 78 HOH HOH . F 6 HOH A 128 528 98 HOH HOH . F 6 HOH A 129 529 143 HOH HOH . F 6 HOH A 130 530 31 HOH HOH . F 6 HOH A 131 531 172 HOH HOH . F 6 HOH A 132 532 112 HOH HOH . F 6 HOH A 133 533 49 HOH HOH . F 6 HOH A 134 534 61 HOH HOH . F 6 HOH A 135 535 201 HOH HOH . F 6 HOH A 136 536 225 HOH HOH . F 6 HOH A 137 537 151 HOH HOH . F 6 HOH A 138 538 88 HOH HOH . F 6 HOH A 139 539 97 HOH HOH . F 6 HOH A 140 540 13 HOH HOH . F 6 HOH A 141 541 83 HOH HOH . F 6 HOH A 142 542 75 HOH HOH . F 6 HOH A 143 543 272 HOH HOH . F 6 HOH A 144 544 276 HOH HOH . F 6 HOH A 145 545 132 HOH HOH . F 6 HOH A 146 546 58 HOH HOH . F 6 HOH A 147 547 216 HOH HOH . F 6 HOH A 148 548 27 HOH HOH . F 6 HOH A 149 549 87 HOH HOH . F 6 HOH A 150 550 50 HOH HOH . F 6 HOH A 151 551 190 HOH HOH . F 6 HOH A 152 552 116 HOH HOH . F 6 HOH A 153 553 19 HOH HOH . F 6 HOH A 154 554 213 HOH HOH . F 6 HOH A 155 555 215 HOH HOH . F 6 HOH A 156 556 36 HOH HOH . F 6 HOH A 157 557 188 HOH HOH . F 6 HOH A 158 558 122 HOH HOH . F 6 HOH A 159 559 106 HOH HOH . F 6 HOH A 160 560 200 HOH HOH . F 6 HOH A 161 561 174 HOH HOH . F 6 HOH A 162 562 145 HOH HOH . F 6 HOH A 163 563 195 HOH HOH . F 6 HOH A 164 564 123 HOH HOH . F 6 HOH A 165 565 79 HOH HOH . F 6 HOH A 166 566 193 HOH HOH . F 6 HOH A 167 567 220 HOH HOH . F 6 HOH A 168 568 169 HOH HOH . F 6 HOH A 169 569 247 HOH HOH . F 6 HOH A 170 570 21 HOH HOH . F 6 HOH A 171 571 41 HOH HOH . F 6 HOH A 172 572 252 HOH HOH . F 6 HOH A 173 573 45 HOH HOH . F 6 HOH A 174 574 226 HOH HOH . F 6 HOH A 175 575 148 HOH HOH . F 6 HOH A 176 576 102 HOH HOH . F 6 HOH A 177 577 37 HOH HOH . F 6 HOH A 178 578 67 HOH HOH . F 6 HOH A 179 579 126 HOH HOH . F 6 HOH A 180 580 82 HOH HOH . F 6 HOH A 181 581 184 HOH HOH . F 6 HOH A 182 582 157 HOH HOH . F 6 HOH A 183 583 104 HOH HOH . F 6 HOH A 184 584 59 HOH HOH . F 6 HOH A 185 585 178 HOH HOH . F 6 HOH A 186 586 153 HOH HOH . F 6 HOH A 187 587 279 HOH HOH . F 6 HOH A 188 588 217 HOH HOH . F 6 HOH A 189 589 115 HOH HOH . F 6 HOH A 190 590 84 HOH HOH . F 6 HOH A 191 591 142 HOH HOH . F 6 HOH A 192 592 158 HOH HOH . F 6 HOH A 193 593 63 HOH HOH . F 6 HOH A 194 594 230 HOH HOH . F 6 HOH A 195 595 189 HOH HOH . F 6 HOH A 196 596 107 HOH HOH . F 6 HOH A 197 597 48 HOH HOH . F 6 HOH A 198 598 70 HOH HOH . F 6 HOH A 199 599 257 HOH HOH . F 6 HOH A 200 600 26 HOH HOH . F 6 HOH A 201 601 118 HOH HOH . F 6 HOH A 202 602 223 HOH HOH . F 6 HOH A 203 603 113 HOH HOH . F 6 HOH A 204 604 273 HOH HOH . F 6 HOH A 205 605 211 HOH HOH . F 6 HOH A 206 606 76 HOH HOH . F 6 HOH A 207 607 167 HOH HOH . F 6 HOH A 208 608 92 HOH HOH . F 6 HOH A 209 609 261 HOH HOH . F 6 HOH A 210 610 90 HOH HOH . F 6 HOH A 211 611 204 HOH HOH . F 6 HOH A 212 612 96 HOH HOH . F 6 HOH A 213 613 53 HOH HOH . F 6 HOH A 214 614 25 HOH HOH . F 6 HOH A 215 615 140 HOH HOH . F 6 HOH A 216 616 177 HOH HOH . F 6 HOH A 217 617 42 HOH HOH . F 6 HOH A 218 618 121 HOH HOH . F 6 HOH A 219 619 109 HOH HOH . F 6 HOH A 220 620 159 HOH HOH . F 6 HOH A 221 621 210 HOH HOH . F 6 HOH A 222 622 163 HOH HOH . F 6 HOH A 223 623 208 HOH HOH . F 6 HOH A 224 624 227 HOH HOH . F 6 HOH A 225 625 239 HOH HOH . F 6 HOH A 226 626 231 HOH HOH . F 6 HOH A 227 627 221 HOH HOH . F 6 HOH A 228 628 85 HOH HOH . F 6 HOH A 229 629 114 HOH HOH . F 6 HOH A 230 630 81 HOH HOH . F 6 HOH A 231 631 197 HOH HOH . F 6 HOH A 232 632 212 HOH HOH . F 6 HOH A 233 633 119 HOH HOH . F 6 HOH A 234 634 150 HOH HOH . F 6 HOH A 235 635 72 HOH HOH . F 6 HOH A 236 636 198 HOH HOH . F 6 HOH A 237 637 147 HOH HOH . F 6 HOH A 238 638 238 HOH HOH . F 6 HOH A 239 639 54 HOH HOH . F 6 HOH A 240 640 275 HOH HOH . F 6 HOH A 241 641 105 HOH HOH . F 6 HOH A 242 642 139 HOH HOH . F 6 HOH A 243 643 131 HOH HOH . F 6 HOH A 244 644 154 HOH HOH . F 6 HOH A 245 645 165 HOH HOH . F 6 HOH A 246 646 278 HOH HOH . F 6 HOH A 247 647 250 HOH HOH . F 6 HOH A 248 648 66 HOH HOH . F 6 HOH A 249 649 181 HOH HOH . F 6 HOH A 250 650 240 HOH HOH . F 6 HOH A 251 651 241 HOH HOH . F 6 HOH A 252 652 194 HOH HOH . F 6 HOH A 253 653 141 HOH HOH . F 6 HOH A 254 654 199 HOH HOH . F 6 HOH A 255 655 270 HOH HOH . F 6 HOH A 256 656 69 HOH HOH . F 6 HOH A 257 657 47 HOH HOH . F 6 HOH A 258 658 166 HOH HOH . F 6 HOH A 259 659 234 HOH HOH . F 6 HOH A 260 660 205 HOH HOH . F 6 HOH A 261 661 214 HOH HOH . F 6 HOH A 262 662 206 HOH HOH . F 6 HOH A 263 663 110 HOH HOH . F 6 HOH A 264 664 117 HOH HOH . F 6 HOH A 265 665 192 HOH HOH . F 6 HOH A 266 666 180 HOH HOH . F 6 HOH A 267 667 161 HOH HOH . F 6 HOH A 268 668 164 HOH HOH . F 6 HOH A 269 669 243 HOH HOH . F 6 HOH A 270 670 73 HOH HOH . F 6 HOH A 271 671 162 HOH HOH . F 6 HOH A 272 672 209 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.176 _atom_site.Cartn_y -1.739 _atom_site.Cartn_z 85.273 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 3.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #