data_5EMF # _model_server_result.job_id qVl131lxSx3TLuA4KkBkew _model_server_result.datetime_utc '2025-03-03 06:51:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5emf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 5EMF # _exptl.entry_id 5EMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5EMF _cell.length_a 35.11 _cell.length_b 35.11 _cell.length_c 69.114 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GPN 1 B GPN 101 1_555 B N CPN 2 B CPN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 B C CPN 2 B CPN 102 1_555 B N APN 3 B APN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 B C APN 3 B APN 103 1_555 B N GPN 4 B GPN 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C GPN 4 B GPN 104 1_555 B N CPN 5 B CPN 105 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C GPN 4 B GPN 104 1_555 B N CPN 5 B CPN 105 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale6 B C CPN 5 B CPN 105 1_555 B N APN 6 B APN 106 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale7 B C CPN 5 B CPN 105 1_555 B N APN 6 B APN 106 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C APN 6 B APN 106 1_555 B N GPN 7 B GPN 107 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale9 B C APN 6 B APN 106 1_555 B N GPN 7 B GPN 107 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale10 B C GPN 7 B GPN 107 1_555 B N CPN 8 B CPN 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EMF _atom_sites.fract_transf_matrix[1][1] 0.028482 _atom_sites.fract_transf_matrix[1][2] 0.016444 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014469 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL A 1 101 1 CL CL . D 3 CL B 1 201 2 CL CL . E 4 HOH A 1 201 75 HOH HOH . E 4 HOH A 2 202 61 HOH HOH . E 4 HOH A 3 203 31 HOH HOH . E 4 HOH A 4 204 18 HOH HOH . E 4 HOH A 5 205 12 HOH HOH . E 4 HOH A 6 206 102 HOH HOH . E 4 HOH A 7 207 15 HOH HOH . E 4 HOH A 8 208 23 HOH HOH . E 4 HOH A 9 209 84 HOH HOH . E 4 HOH A 10 210 2 HOH HOH . E 4 HOH A 11 211 62 HOH HOH . E 4 HOH A 12 212 81 HOH HOH . E 4 HOH A 13 213 34 HOH HOH . E 4 HOH A 14 214 111 HOH HOH . E 4 HOH A 15 215 20 HOH HOH . E 4 HOH A 16 216 24 HOH HOH . E 4 HOH A 17 217 74 HOH HOH . E 4 HOH A 18 218 87 HOH HOH . E 4 HOH A 19 219 55 HOH HOH . E 4 HOH A 20 220 91 HOH HOH . E 4 HOH A 21 221 40 HOH HOH . E 4 HOH A 22 222 49 HOH HOH . E 4 HOH A 23 223 37 HOH HOH . E 4 HOH A 24 224 45 HOH HOH . E 4 HOH A 25 225 33 HOH HOH . E 4 HOH A 26 226 9 HOH HOH . E 4 HOH A 27 227 86 HOH HOH . E 4 HOH A 28 228 97 HOH HOH . E 4 HOH A 29 229 6 HOH HOH . E 4 HOH A 30 230 5 HOH HOH . E 4 HOH A 31 231 29 HOH HOH . E 4 HOH A 32 232 4 HOH HOH . E 4 HOH A 33 233 104 HOH HOH . E 4 HOH A 34 234 1 HOH HOH . E 4 HOH A 35 235 22 HOH HOH . E 4 HOH A 36 236 47 HOH HOH . E 4 HOH A 37 237 53 HOH HOH . E 4 HOH A 38 238 50 HOH HOH . E 4 HOH A 39 239 64 HOH HOH . E 4 HOH A 40 240 54 HOH HOH . E 4 HOH A 41 241 105 HOH HOH . E 4 HOH A 42 242 42 HOH HOH . E 4 HOH A 43 243 92 HOH HOH . E 4 HOH A 44 244 16 HOH HOH . E 4 HOH A 45 245 17 HOH HOH . E 4 HOH A 46 246 95 HOH HOH . E 4 HOH A 47 247 59 HOH HOH . E 4 HOH A 48 248 21 HOH HOH . E 4 HOH A 49 249 46 HOH HOH . E 4 HOH A 50 250 48 HOH HOH . E 4 HOH A 51 251 80 HOH HOH . E 4 HOH A 52 252 103 HOH HOH . E 4 HOH A 53 253 41 HOH HOH . E 4 HOH A 54 254 88 HOH HOH . E 4 HOH A 55 255 25 HOH HOH . E 4 HOH A 56 256 76 HOH HOH . E 4 HOH A 57 257 93 HOH HOH . E 4 HOH A 58 258 68 HOH HOH . E 4 HOH A 59 259 36 HOH HOH . E 4 HOH A 60 260 35 HOH HOH . E 4 HOH A 61 261 39 HOH HOH . E 4 HOH A 62 262 52 HOH HOH . E 4 HOH A 63 263 32 HOH HOH . E 4 HOH A 64 264 98 HOH HOH . E 4 HOH A 65 265 106 HOH HOH . E 4 HOH A 66 266 85 HOH HOH . E 4 HOH A 67 267 99 HOH HOH . E 4 HOH A 68 268 90 HOH HOH . E 4 HOH A 69 269 96 HOH HOH . E 4 HOH A 70 270 78 HOH HOH . F 4 HOH B 1 301 19 HOH HOH . F 4 HOH B 2 302 109 HOH HOH . F 4 HOH B 3 303 14 HOH HOH . F 4 HOH B 4 304 43 HOH HOH . F 4 HOH B 5 305 26 HOH HOH . F 4 HOH B 6 306 108 HOH HOH . F 4 HOH B 7 307 30 HOH HOH . F 4 HOH B 8 308 13 HOH HOH . F 4 HOH B 9 309 89 HOH HOH . F 4 HOH B 10 310 73 HOH HOH . F 4 HOH B 11 311 10 HOH HOH . F 4 HOH B 12 312 56 HOH HOH . F 4 HOH B 13 313 3 HOH HOH . F 4 HOH B 14 314 101 HOH HOH . F 4 HOH B 15 315 11 HOH HOH . F 4 HOH B 16 316 114 HOH HOH . F 4 HOH B 17 317 38 HOH HOH . F 4 HOH B 18 318 44 HOH HOH . F 4 HOH B 19 319 67 HOH HOH . F 4 HOH B 20 320 8 HOH HOH . F 4 HOH B 21 321 72 HOH HOH . F 4 HOH B 22 322 51 HOH HOH . F 4 HOH B 23 323 7 HOH HOH . F 4 HOH B 24 324 65 HOH HOH . F 4 HOH B 25 325 82 HOH HOH . F 4 HOH B 26 326 63 HOH HOH . F 4 HOH B 27 327 27 HOH HOH . F 4 HOH B 28 328 57 HOH HOH . F 4 HOH B 29 329 100 HOH HOH . F 4 HOH B 30 330 107 HOH HOH . F 4 HOH B 31 331 113 HOH HOH . F 4 HOH B 32 332 28 HOH HOH . F 4 HOH B 33 333 94 HOH HOH . F 4 HOH B 34 334 79 HOH HOH . F 4 HOH B 35 335 77 HOH HOH . F 4 HOH B 36 336 70 HOH HOH . F 4 HOH B 37 337 71 HOH HOH . F 4 HOH B 38 338 66 HOH HOH . F 4 HOH B 39 339 110 HOH HOH . F 4 HOH B 40 340 58 HOH HOH . F 4 HOH B 41 341 69 HOH HOH . F 4 HOH B 42 342 112 HOH HOH . F 4 HOH B 43 343 83 HOH HOH . F 4 HOH B 44 344 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 18.701 _atom_site.Cartn_y -15.288 _atom_site.Cartn_z 3.622 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 33.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #