data_5EMT # _model_server_result.job_id zVI6W_C0030QQG3r2awnKA _model_server_result.datetime_utc '2024-11-24 04:15:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5emt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 5EMT # _exptl.entry_id 5EMT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.62 _cell.angle_gamma 90 _cell.entry_id 5EMT _cell.length_a 77.25 _cell.length_b 46.22 _cell.length_c 63.83 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 115 A HIS 112 1_555 E CU CU . A CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc2 A NE2 HIS 117 A HIS 114 1_555 E CU CU . A CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 A NE2 HIS 125 A HIS 122 1_555 D CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc4 B ND1 HIS 113 B HIS 110 1_555 I CU CU . B CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc5 B NE2 HIS 115 B HIS 112 1_555 G CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc6 B NE2 HIS 125 B HIS 122 1_555 H CU CU . B CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc7 H CU CU . B CU 202 1_555 K O HOH . B HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc8 I CU CU . B CU 203 1_555 K O HOH . B HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EMT _atom_sites.fract_transf_matrix[1][1] 0.012945 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001047 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 201 2 CU Cu . D 2 CU A 1 202 3 CU Cu . E 2 CU A 1 203 6 CU Cu . F 2 CU A 1 204 7 CU Cu . G 2 CU B 1 201 1 CU Cu . H 2 CU B 1 202 4 CU Cu . I 2 CU B 1 203 5 CU Cu . J 3 HOH A 1 301 61 HOH HOH . J 3 HOH A 2 302 54 HOH HOH . J 3 HOH A 3 303 145 HOH HOH . J 3 HOH A 4 304 244 HOH HOH . J 3 HOH A 5 305 69 HOH HOH . J 3 HOH A 6 306 80 HOH HOH . J 3 HOH A 7 307 245 HOH HOH . J 3 HOH A 8 308 139 HOH HOH . J 3 HOH A 9 309 261 HOH HOH . J 3 HOH A 10 310 92 HOH HOH . J 3 HOH A 11 311 132 HOH HOH . J 3 HOH A 12 312 99 HOH HOH . J 3 HOH A 13 313 268 HOH HOH . J 3 HOH A 14 314 29 HOH HOH . J 3 HOH A 15 315 4 HOH HOH . J 3 HOH A 16 316 86 HOH HOH . J 3 HOH A 17 317 16 HOH HOH . J 3 HOH A 18 318 68 HOH HOH . J 3 HOH A 19 319 11 HOH HOH . J 3 HOH A 20 320 201 HOH HOH . J 3 HOH A 21 321 187 HOH HOH . J 3 HOH A 22 322 28 HOH HOH . J 3 HOH A 23 323 194 HOH HOH . J 3 HOH A 24 324 278 HOH HOH . J 3 HOH A 25 325 72 HOH HOH . J 3 HOH A 26 326 108 HOH HOH . J 3 HOH A 27 327 40 HOH HOH . J 3 HOH A 28 328 81 HOH HOH . J 3 HOH A 29 329 5 HOH HOH . J 3 HOH A 30 330 75 HOH HOH . J 3 HOH A 31 331 179 HOH HOH . J 3 HOH A 32 332 212 HOH HOH . J 3 HOH A 33 333 45 HOH HOH . J 3 HOH A 34 334 27 HOH HOH . J 3 HOH A 35 335 266 HOH HOH . J 3 HOH A 36 336 55 HOH HOH . J 3 HOH A 37 337 97 HOH HOH . J 3 HOH A 38 338 90 HOH HOH . J 3 HOH A 39 339 30 HOH HOH . J 3 HOH A 40 340 32 HOH HOH . J 3 HOH A 41 341 87 HOH HOH . J 3 HOH A 42 342 151 HOH HOH . J 3 HOH A 43 343 74 HOH HOH . J 3 HOH A 44 344 169 HOH HOH . J 3 HOH A 45 345 19 HOH HOH . J 3 HOH A 46 346 93 HOH HOH . J 3 HOH A 47 347 220 HOH HOH . J 3 HOH A 48 348 9 HOH HOH . J 3 HOH A 49 349 100 HOH HOH . J 3 HOH A 50 350 15 HOH HOH . J 3 HOH A 51 351 238 HOH HOH . J 3 HOH A 52 352 84 HOH HOH . J 3 HOH A 53 353 234 HOH HOH . J 3 HOH A 54 354 24 HOH HOH . J 3 HOH A 55 355 144 HOH HOH . J 3 HOH A 56 356 41 HOH HOH . J 3 HOH A 57 357 60 HOH HOH . J 3 HOH A 58 358 105 HOH HOH . J 3 HOH A 59 359 141 HOH HOH . J 3 HOH A 60 360 76 HOH HOH . J 3 HOH A 61 361 96 HOH HOH . J 3 HOH A 62 362 59 HOH HOH . J 3 HOH A 63 363 258 HOH HOH . J 3 HOH A 64 364 289 HOH HOH . J 3 HOH A 65 365 43 HOH HOH . J 3 HOH A 66 366 113 HOH HOH . J 3 HOH A 67 367 1 HOH HOH . J 3 HOH A 68 368 195 HOH HOH . J 3 HOH A 69 369 115 HOH HOH . J 3 HOH A 70 370 213 HOH HOH . J 3 HOH A 71 371 177 HOH HOH . J 3 HOH A 72 372 51 HOH HOH . J 3 HOH A 73 373 70 HOH HOH . J 3 HOH A 74 374 162 HOH HOH . J 3 HOH A 75 375 124 HOH HOH . J 3 HOH A 76 376 171 HOH HOH . J 3 HOH A 77 377 272 HOH HOH . J 3 HOH A 78 378 57 HOH HOH . J 3 HOH A 79 379 192 HOH HOH . J 3 HOH A 80 380 42 HOH HOH . J 3 HOH A 81 381 281 HOH HOH . J 3 HOH A 82 382 163 HOH HOH . J 3 HOH A 83 383 211 HOH HOH . J 3 HOH A 84 384 23 HOH HOH . J 3 HOH A 85 385 174 HOH HOH . J 3 HOH A 86 386 146 HOH HOH . J 3 HOH A 87 387 85 HOH HOH . J 3 HOH A 88 388 185 HOH HOH . J 3 HOH A 89 389 186 HOH HOH . J 3 HOH A 90 390 123 HOH HOH . J 3 HOH A 91 391 65 HOH HOH . J 3 HOH A 92 392 114 HOH HOH . J 3 HOH A 93 393 14 HOH HOH . J 3 HOH A 94 394 10 HOH HOH . J 3 HOH A 95 395 168 HOH HOH . J 3 HOH A 96 396 67 HOH HOH . J 3 HOH A 97 397 205 HOH HOH . J 3 HOH A 98 398 133 HOH HOH . J 3 HOH A 99 399 176 HOH HOH . J 3 HOH A 100 400 103 HOH HOH . J 3 HOH A 101 401 287 HOH HOH . J 3 HOH A 102 402 193 HOH HOH . J 3 HOH A 103 403 228 HOH HOH . J 3 HOH A 104 404 134 HOH HOH . J 3 HOH A 105 405 246 HOH HOH . J 3 HOH A 106 406 148 HOH HOH . J 3 HOH A 107 407 197 HOH HOH . J 3 HOH A 108 408 135 HOH HOH . J 3 HOH A 109 409 122 HOH HOH . J 3 HOH A 110 410 282 HOH HOH . J 3 HOH A 111 411 112 HOH HOH . J 3 HOH A 112 412 184 HOH HOH . J 3 HOH A 113 413 110 HOH HOH . J 3 HOH A 114 414 153 HOH HOH . J 3 HOH A 115 415 126 HOH HOH . J 3 HOH A 116 416 202 HOH HOH . J 3 HOH A 117 417 254 HOH HOH . J 3 HOH A 118 418 247 HOH HOH . J 3 HOH A 119 419 101 HOH HOH . J 3 HOH A 120 420 223 HOH HOH . J 3 HOH A 121 421 250 HOH HOH . J 3 HOH A 122 422 154 HOH HOH . J 3 HOH A 123 423 257 HOH HOH . J 3 HOH A 124 424 191 HOH HOH . J 3 HOH A 125 425 147 HOH HOH . J 3 HOH A 126 426 253 HOH HOH . J 3 HOH A 127 427 275 HOH HOH . J 3 HOH A 128 428 119 HOH HOH . J 3 HOH A 129 429 91 HOH HOH . J 3 HOH A 130 430 47 HOH HOH . J 3 HOH A 131 431 271 HOH HOH . J 3 HOH A 132 432 280 HOH HOH . J 3 HOH A 133 433 157 HOH HOH . J 3 HOH A 134 434 219 HOH HOH . K 3 HOH B 1 301 188 HOH HOH . K 3 HOH B 2 302 104 HOH HOH . K 3 HOH B 3 303 285 HOH HOH . K 3 HOH B 4 304 182 HOH HOH . K 3 HOH B 5 305 208 HOH HOH . K 3 HOH B 6 306 77 HOH HOH . K 3 HOH B 7 307 138 HOH HOH . K 3 HOH B 8 308 48 HOH HOH . K 3 HOH B 9 309 170 HOH HOH . K 3 HOH B 10 310 241 HOH HOH . K 3 HOH B 11 311 181 HOH HOH . K 3 HOH B 12 312 183 HOH HOH . K 3 HOH B 13 313 118 HOH HOH . K 3 HOH B 14 314 178 HOH HOH . K 3 HOH B 15 315 25 HOH HOH . K 3 HOH B 16 316 259 HOH HOH . K 3 HOH B 17 317 2 HOH HOH . K 3 HOH B 18 318 251 HOH HOH . K 3 HOH B 19 319 17 HOH HOH . K 3 HOH B 20 320 121 HOH HOH . K 3 HOH B 21 321 36 HOH HOH . K 3 HOH B 22 322 172 HOH HOH . K 3 HOH B 23 323 252 HOH HOH . K 3 HOH B 24 324 52 HOH HOH . K 3 HOH B 25 325 38 HOH HOH . K 3 HOH B 26 326 78 HOH HOH . K 3 HOH B 27 327 125 HOH HOH . K 3 HOH B 28 328 98 HOH HOH . K 3 HOH B 29 329 12 HOH HOH . K 3 HOH B 30 330 116 HOH HOH . K 3 HOH B 31 331 198 HOH HOH . K 3 HOH B 32 332 94 HOH HOH . K 3 HOH B 33 333 71 HOH HOH . K 3 HOH B 34 334 50 HOH HOH . K 3 HOH B 35 335 136 HOH HOH . K 3 HOH B 36 336 20 HOH HOH . K 3 HOH B 37 337 33 HOH HOH . K 3 HOH B 38 338 175 HOH HOH . K 3 HOH B 39 339 56 HOH HOH . K 3 HOH B 40 340 89 HOH HOH . K 3 HOH B 41 341 39 HOH HOH . K 3 HOH B 42 342 142 HOH HOH . K 3 HOH B 43 343 73 HOH HOH . K 3 HOH B 44 344 264 HOH HOH . K 3 HOH B 45 345 35 HOH HOH . K 3 HOH B 46 346 270 HOH HOH . K 3 HOH B 47 347 190 HOH HOH . K 3 HOH B 48 348 13 HOH HOH . K 3 HOH B 49 349 64 HOH HOH . K 3 HOH B 50 350 26 HOH HOH . K 3 HOH B 51 351 66 HOH HOH . K 3 HOH B 52 352 22 HOH HOH . K 3 HOH B 53 353 88 HOH HOH . K 3 HOH B 54 354 221 HOH HOH . K 3 HOH B 55 355 237 HOH HOH . K 3 HOH B 56 356 273 HOH HOH . K 3 HOH B 57 357 286 HOH HOH . K 3 HOH B 58 358 269 HOH HOH . K 3 HOH B 59 359 53 HOH HOH . K 3 HOH B 60 360 129 HOH HOH . K 3 HOH B 61 361 165 HOH HOH . K 3 HOH B 62 362 58 HOH HOH . K 3 HOH B 63 363 49 HOH HOH . K 3 HOH B 64 364 44 HOH HOH . K 3 HOH B 65 365 164 HOH HOH . K 3 HOH B 66 366 8 HOH HOH . K 3 HOH B 67 367 102 HOH HOH . K 3 HOH B 68 368 111 HOH HOH . K 3 HOH B 69 369 167 HOH HOH . K 3 HOH B 70 370 63 HOH HOH . K 3 HOH B 71 371 236 HOH HOH . K 3 HOH B 72 372 166 HOH HOH . K 3 HOH B 73 373 206 HOH HOH . K 3 HOH B 74 374 196 HOH HOH . K 3 HOH B 75 375 7 HOH HOH . K 3 HOH B 76 376 128 HOH HOH . K 3 HOH B 77 377 83 HOH HOH . K 3 HOH B 78 378 218 HOH HOH . K 3 HOH B 79 379 62 HOH HOH . K 3 HOH B 80 380 120 HOH HOH . K 3 HOH B 81 381 21 HOH HOH . K 3 HOH B 82 382 137 HOH HOH . K 3 HOH B 83 383 109 HOH HOH . K 3 HOH B 84 384 180 HOH HOH . K 3 HOH B 85 385 203 HOH HOH . K 3 HOH B 86 386 46 HOH HOH . K 3 HOH B 87 387 209 HOH HOH . K 3 HOH B 88 388 82 HOH HOH . K 3 HOH B 89 389 34 HOH HOH . K 3 HOH B 90 390 200 HOH HOH . K 3 HOH B 91 391 277 HOH HOH . K 3 HOH B 92 392 37 HOH HOH . K 3 HOH B 93 393 155 HOH HOH . K 3 HOH B 94 394 150 HOH HOH . K 3 HOH B 95 395 217 HOH HOH . K 3 HOH B 96 396 207 HOH HOH . K 3 HOH B 97 397 173 HOH HOH . K 3 HOH B 98 398 204 HOH HOH . K 3 HOH B 99 399 274 HOH HOH . K 3 HOH B 100 400 189 HOH HOH . K 3 HOH B 101 401 239 HOH HOH . K 3 HOH B 102 402 265 HOH HOH . K 3 HOH B 103 403 276 HOH HOH . K 3 HOH B 104 404 107 HOH HOH . K 3 HOH B 105 405 255 HOH HOH . K 3 HOH B 106 406 227 HOH HOH . K 3 HOH B 107 407 79 HOH HOH . K 3 HOH B 108 408 117 HOH HOH . K 3 HOH B 109 409 152 HOH HOH . K 3 HOH B 110 410 283 HOH HOH . K 3 HOH B 111 411 229 HOH HOH . K 3 HOH B 112 412 279 HOH HOH . K 3 HOH B 113 413 232 HOH HOH . K 3 HOH B 114 414 235 HOH HOH . K 3 HOH B 115 415 240 HOH HOH . K 3 HOH B 116 416 284 HOH HOH . K 3 HOH B 117 417 233 HOH HOH . K 3 HOH B 118 418 106 HOH HOH . K 3 HOH B 119 419 256 HOH HOH . K 3 HOH B 120 420 242 HOH HOH . K 3 HOH B 121 421 156 HOH HOH . K 3 HOH B 122 422 226 HOH HOH . K 3 HOH B 123 423 149 HOH HOH . K 3 HOH B 124 424 230 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -37.562 _atom_site.Cartn_y 14.925 _atom_site.Cartn_z -11.998 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 53.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #