data_5ENC # _model_server_result.job_id xY8TsDtXzVPGy1WtCVCruw _model_server_result.datetime_utc '2025-01-25 13:58:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5enc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1502}' # _entry.id 5ENC # _exptl.entry_id 5ENC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ENC _cell.length_a 60.687 _cell.length_b 91.582 _cell.length_c 24.033 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ENC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 105 n n C1 C2 EDO sing 106 n n C1 H11 EDO sing 107 n n C1 H12 EDO sing 108 n n O1 HO1 EDO sing 109 n n C2 O2 EDO sing 110 n n C2 H21 EDO sing 111 n n C2 H22 EDO sing 112 n n O2 HO2 EDO sing 113 n n # _atom_sites.entry_id 5ENC _atom_sites.fract_transf_matrix[1][1] 0.016478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.041609 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1501 1 EDO EDO . C 2 EDO A 1 1502 2 EDO EDO . D 3 5QD A 1 1503 1 5QD LIG . E 4 HOH A 1 1601 196 HOH HOH . E 4 HOH A 2 1602 96 HOH HOH . E 4 HOH A 3 1603 97 HOH HOH . E 4 HOH A 4 1604 85 HOH HOH . E 4 HOH A 5 1605 80 HOH HOH . E 4 HOH A 6 1606 77 HOH HOH . E 4 HOH A 7 1607 67 HOH HOH . E 4 HOH A 8 1608 148 HOH HOH . E 4 HOH A 9 1609 89 HOH HOH . E 4 HOH A 10 1610 73 HOH HOH . E 4 HOH A 11 1611 2 HOH HOH . E 4 HOH A 12 1612 93 HOH HOH . E 4 HOH A 13 1613 17 HOH HOH . E 4 HOH A 14 1614 138 HOH HOH . E 4 HOH A 15 1615 25 HOH HOH . E 4 HOH A 16 1616 146 HOH HOH . E 4 HOH A 17 1617 46 HOH HOH . E 4 HOH A 18 1618 157 HOH HOH . E 4 HOH A 19 1619 8 HOH HOH . E 4 HOH A 20 1620 122 HOH HOH . E 4 HOH A 21 1621 14 HOH HOH . E 4 HOH A 22 1622 86 HOH HOH . E 4 HOH A 23 1623 71 HOH HOH . E 4 HOH A 24 1624 10 HOH HOH . E 4 HOH A 25 1625 22 HOH HOH . E 4 HOH A 26 1626 58 HOH HOH . E 4 HOH A 27 1627 34 HOH HOH . E 4 HOH A 28 1628 11 HOH HOH . E 4 HOH A 29 1629 7 HOH HOH . E 4 HOH A 30 1630 12 HOH HOH . E 4 HOH A 31 1631 20 HOH HOH . E 4 HOH A 32 1632 68 HOH HOH . E 4 HOH A 33 1633 87 HOH HOH . E 4 HOH A 34 1634 165 HOH HOH . E 4 HOH A 35 1635 163 HOH HOH . E 4 HOH A 36 1636 102 HOH HOH . E 4 HOH A 37 1637 6 HOH HOH . E 4 HOH A 38 1638 133 HOH HOH . E 4 HOH A 39 1639 4 HOH HOH . E 4 HOH A 40 1640 112 HOH HOH . E 4 HOH A 41 1641 9 HOH HOH . E 4 HOH A 42 1642 179 HOH HOH . E 4 HOH A 43 1643 132 HOH HOH . E 4 HOH A 44 1644 75 HOH HOH . E 4 HOH A 45 1645 29 HOH HOH . E 4 HOH A 46 1646 16 HOH HOH . E 4 HOH A 47 1647 65 HOH HOH . E 4 HOH A 48 1648 1 HOH HOH . E 4 HOH A 49 1649 18 HOH HOH . E 4 HOH A 50 1650 54 HOH HOH . E 4 HOH A 51 1651 107 HOH HOH . E 4 HOH A 52 1652 31 HOH HOH . E 4 HOH A 53 1653 109 HOH HOH . E 4 HOH A 54 1654 61 HOH HOH . E 4 HOH A 55 1655 48 HOH HOH . E 4 HOH A 56 1656 57 HOH HOH . E 4 HOH A 57 1657 95 HOH HOH . E 4 HOH A 58 1658 5 HOH HOH . E 4 HOH A 59 1659 162 HOH HOH . E 4 HOH A 60 1660 149 HOH HOH . E 4 HOH A 61 1661 55 HOH HOH . E 4 HOH A 62 1662 99 HOH HOH . E 4 HOH A 63 1663 156 HOH HOH . E 4 HOH A 64 1664 108 HOH HOH . E 4 HOH A 65 1665 92 HOH HOH . E 4 HOH A 66 1666 43 HOH HOH . E 4 HOH A 67 1667 30 HOH HOH . E 4 HOH A 68 1668 189 HOH HOH . E 4 HOH A 69 1669 81 HOH HOH . E 4 HOH A 70 1670 45 HOH HOH . E 4 HOH A 71 1671 19 HOH HOH . E 4 HOH A 72 1672 56 HOH HOH . E 4 HOH A 73 1673 169 HOH HOH . E 4 HOH A 74 1674 124 HOH HOH . E 4 HOH A 75 1675 13 HOH HOH . E 4 HOH A 76 1676 105 HOH HOH . E 4 HOH A 77 1677 194 HOH HOH . E 4 HOH A 78 1678 191 HOH HOH . E 4 HOH A 79 1679 126 HOH HOH . E 4 HOH A 80 1680 49 HOH HOH . E 4 HOH A 81 1681 137 HOH HOH . E 4 HOH A 82 1682 101 HOH HOH . E 4 HOH A 83 1683 106 HOH HOH . E 4 HOH A 84 1684 42 HOH HOH . E 4 HOH A 85 1685 76 HOH HOH . E 4 HOH A 86 1686 62 HOH HOH . E 4 HOH A 87 1687 51 HOH HOH . E 4 HOH A 88 1688 172 HOH HOH . E 4 HOH A 89 1689 139 HOH HOH . E 4 HOH A 90 1690 52 HOH HOH . E 4 HOH A 91 1691 23 HOH HOH . E 4 HOH A 92 1692 35 HOH HOH . E 4 HOH A 93 1693 173 HOH HOH . E 4 HOH A 94 1694 26 HOH HOH . E 4 HOH A 95 1695 33 HOH HOH . E 4 HOH A 96 1696 59 HOH HOH . E 4 HOH A 97 1697 160 HOH HOH . E 4 HOH A 98 1698 83 HOH HOH . E 4 HOH A 99 1699 176 HOH HOH . E 4 HOH A 100 1700 135 HOH HOH . E 4 HOH A 101 1701 36 HOH HOH . E 4 HOH A 102 1702 28 HOH HOH . E 4 HOH A 103 1703 21 HOH HOH . E 4 HOH A 104 1704 170 HOH HOH . E 4 HOH A 105 1705 100 HOH HOH . E 4 HOH A 106 1706 37 HOH HOH . E 4 HOH A 107 1707 128 HOH HOH . E 4 HOH A 108 1708 90 HOH HOH . E 4 HOH A 109 1709 64 HOH HOH . E 4 HOH A 110 1710 39 HOH HOH . E 4 HOH A 111 1711 3 HOH HOH . E 4 HOH A 112 1712 197 HOH HOH . E 4 HOH A 113 1713 114 HOH HOH . E 4 HOH A 114 1714 175 HOH HOH . E 4 HOH A 115 1715 41 HOH HOH . E 4 HOH A 116 1716 50 HOH HOH . E 4 HOH A 117 1717 195 HOH HOH . E 4 HOH A 118 1718 88 HOH HOH . E 4 HOH A 119 1719 130 HOH HOH . E 4 HOH A 120 1720 180 HOH HOH . E 4 HOH A 121 1721 192 HOH HOH . E 4 HOH A 122 1722 32 HOH HOH . E 4 HOH A 123 1723 193 HOH HOH . E 4 HOH A 124 1724 127 HOH HOH . E 4 HOH A 125 1725 72 HOH HOH . E 4 HOH A 126 1726 142 HOH HOH . E 4 HOH A 127 1727 147 HOH HOH . E 4 HOH A 128 1728 91 HOH HOH . E 4 HOH A 129 1729 153 HOH HOH . E 4 HOH A 130 1730 84 HOH HOH . E 4 HOH A 131 1731 27 HOH HOH . E 4 HOH A 132 1732 182 HOH HOH . E 4 HOH A 133 1733 63 HOH HOH . E 4 HOH A 134 1734 74 HOH HOH . E 4 HOH A 135 1735 144 HOH HOH . E 4 HOH A 136 1736 38 HOH HOH . E 4 HOH A 137 1737 110 HOH HOH . E 4 HOH A 138 1738 118 HOH HOH . E 4 HOH A 139 1739 44 HOH HOH . E 4 HOH A 140 1740 159 HOH HOH . E 4 HOH A 141 1741 70 HOH HOH . E 4 HOH A 142 1742 117 HOH HOH . E 4 HOH A 143 1743 78 HOH HOH . E 4 HOH A 144 1744 174 HOH HOH . E 4 HOH A 145 1745 183 HOH HOH . E 4 HOH A 146 1746 152 HOH HOH . E 4 HOH A 147 1747 166 HOH HOH . E 4 HOH A 148 1748 131 HOH HOH . E 4 HOH A 149 1749 24 HOH HOH . E 4 HOH A 150 1750 145 HOH HOH . E 4 HOH A 151 1751 60 HOH HOH . E 4 HOH A 152 1752 120 HOH HOH . E 4 HOH A 153 1753 136 HOH HOH . E 4 HOH A 154 1754 198 HOH HOH . E 4 HOH A 155 1755 79 HOH HOH . E 4 HOH A 156 1756 123 HOH HOH . E 4 HOH A 157 1757 47 HOH HOH . E 4 HOH A 158 1758 151 HOH HOH . E 4 HOH A 159 1759 154 HOH HOH . E 4 HOH A 160 1760 103 HOH HOH . E 4 HOH A 161 1761 69 HOH HOH . E 4 HOH A 162 1762 167 HOH HOH . E 4 HOH A 163 1763 187 HOH HOH . E 4 HOH A 164 1764 184 HOH HOH . E 4 HOH A 165 1765 82 HOH HOH . E 4 HOH A 166 1766 158 HOH HOH . E 4 HOH A 167 1767 116 HOH HOH . E 4 HOH A 168 1768 188 HOH HOH . E 4 HOH A 169 1769 53 HOH HOH . E 4 HOH A 170 1770 125 HOH HOH . E 4 HOH A 171 1771 155 HOH HOH . E 4 HOH A 172 1772 134 HOH HOH . E 4 HOH A 173 1773 161 HOH HOH . E 4 HOH A 174 1774 178 HOH HOH . E 4 HOH A 175 1775 181 HOH HOH . E 4 HOH A 176 1776 94 HOH HOH . E 4 HOH A 177 1777 168 HOH HOH . E 4 HOH A 178 1778 66 HOH HOH . E 4 HOH A 179 1779 140 HOH HOH . E 4 HOH A 180 1780 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -10.318 2.965 0.118 1 44.32 ? C1 EDO 1502 A 1 HETATM 2 O O1 EDO . . . C 2 -11.592 2.498 -0.378 1 45.44 ? O1 EDO 1502 A 1 HETATM 3 C C2 EDO . . . C 2 -9.289 1.829 0.143 1 46.69 ? C2 EDO 1502 A 1 HETATM 4 O O2 EDO . . . C 2 -8.493 1.75 -1.057 1 44.66 ? O2 EDO 1502 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #