data_5ENM
#
_model_server_result.job_id            mKKfOhupC9wtbzd9Os7r-Q 
_model_server_result.datetime_utc      '2024-11-06 18:38:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5enm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    5ENM 
#
_exptl.entry_id    5ENM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5ENM 
_cell.length_a            102.234 
_cell.length_b            102.234 
_cell.length_c            170.579 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ENM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 217 A CYS 203 1_555 A SG CYS 421 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 279 A CYS 265 1_555 A SG CYS 444 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 179 n n 
C1 C2 GOL sing 180 n n 
C1 H11 GOL sing 181 n n 
C1 H12 GOL sing 182 n n 
O1 HO1 GOL sing 183 n n 
C2 O2 GOL sing 184 n n 
C2 C3 GOL sing 185 n n 
C2 H2 GOL sing 186 n n 
O2 HO2 GOL sing 187 n n 
C3 O3 GOL sing 188 n n 
C3 H31 GOL sing 189 n n 
C3 H32 GOL sing 190 n n 
O3 HO3 GOL sing 191 n n 
#
_atom_sites.entry_id                     5ENM 
_atom_sites.fract_transf_matrix[1][1]    0.009781 
_atom_sites.fract_transf_matrix[1][2]    0.005647 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011295 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 501 1 GOL GOL . 
C 3 IOD A 1 502 1 IOD IOD . 
D 4 5QU A 1 503 1 5QU LG1 . 
E 5 HOH A 1 601 91 HOH HOH . 
E 5 HOH A 2 602 59 HOH HOH . 
E 5 HOH A 3 603 85 HOH HOH . 
E 5 HOH A 4 604 31 HOH HOH . 
E 5 HOH A 5 605 14 HOH HOH . 
E 5 HOH A 6 606 51 HOH HOH . 
E 5 HOH A 7 607 56 HOH HOH . 
E 5 HOH A 8 608 19 HOH HOH . 
E 5 HOH A 9 609 20 HOH HOH . 
E 5 HOH A 10 610 8 HOH HOH . 
E 5 HOH A 11 611 53 HOH HOH . 
E 5 HOH A 12 612 63 HOH HOH . 
E 5 HOH A 13 613 65 HOH HOH . 
E 5 HOH A 14 614 67 HOH HOH . 
E 5 HOH A 15 615 15 HOH HOH . 
E 5 HOH A 16 616 5 HOH HOH . 
E 5 HOH A 17 617 26 HOH HOH . 
E 5 HOH A 18 618 24 HOH HOH . 
E 5 HOH A 19 619 43 HOH HOH . 
E 5 HOH A 20 620 30 HOH HOH . 
E 5 HOH A 21 621 42 HOH HOH . 
E 5 HOH A 22 622 11 HOH HOH . 
E 5 HOH A 23 623 3 HOH HOH . 
E 5 HOH A 24 624 111 HOH HOH . 
E 5 HOH A 25 625 92 HOH HOH . 
E 5 HOH A 26 626 90 HOH HOH . 
E 5 HOH A 27 627 48 HOH HOH . 
E 5 HOH A 28 628 10 HOH HOH . 
E 5 HOH A 29 629 125 HOH HOH . 
E 5 HOH A 30 630 1 HOH HOH . 
E 5 HOH A 31 631 88 HOH HOH . 
E 5 HOH A 32 632 4 HOH HOH . 
E 5 HOH A 33 633 98 HOH HOH . 
E 5 HOH A 34 634 36 HOH HOH . 
E 5 HOH A 35 635 45 HOH HOH . 
E 5 HOH A 36 636 18 HOH HOH . 
E 5 HOH A 37 637 60 HOH HOH . 
E 5 HOH A 38 638 50 HOH HOH . 
E 5 HOH A 39 639 95 HOH HOH . 
E 5 HOH A 40 640 130 HOH HOH . 
E 5 HOH A 41 641 126 HOH HOH . 
E 5 HOH A 42 642 16 HOH HOH . 
E 5 HOH A 43 643 37 HOH HOH . 
E 5 HOH A 44 644 69 HOH HOH . 
E 5 HOH A 45 645 128 HOH HOH . 
E 5 HOH A 46 646 17 HOH HOH . 
E 5 HOH A 47 647 13 HOH HOH . 
E 5 HOH A 48 648 117 HOH HOH . 
E 5 HOH A 49 649 94 HOH HOH . 
E 5 HOH A 50 650 120 HOH HOH . 
E 5 HOH A 51 651 21 HOH HOH . 
E 5 HOH A 52 652 2 HOH HOH . 
E 5 HOH A 53 653 44 HOH HOH . 
E 5 HOH A 54 654 29 HOH HOH . 
E 5 HOH A 55 655 68 HOH HOH . 
E 5 HOH A 56 656 6 HOH HOH . 
E 5 HOH A 57 657 81 HOH HOH . 
E 5 HOH A 58 658 9 HOH HOH . 
E 5 HOH A 59 659 58 HOH HOH . 
E 5 HOH A 60 660 115 HOH HOH . 
E 5 HOH A 61 661 79 HOH HOH . 
E 5 HOH A 62 662 74 HOH HOH . 
E 5 HOH A 63 663 119 HOH HOH . 
E 5 HOH A 64 664 54 HOH HOH . 
E 5 HOH A 65 665 12 HOH HOH . 
E 5 HOH A 66 666 114 HOH HOH . 
E 5 HOH A 67 667 49 HOH HOH . 
E 5 HOH A 68 668 87 HOH HOH . 
E 5 HOH A 69 669 38 HOH HOH . 
E 5 HOH A 70 670 34 HOH HOH . 
E 5 HOH A 71 671 27 HOH HOH . 
E 5 HOH A 72 672 22 HOH HOH . 
E 5 HOH A 73 673 61 HOH HOH . 
E 5 HOH A 74 674 39 HOH HOH . 
E 5 HOH A 75 675 62 HOH HOH . 
E 5 HOH A 76 676 73 HOH HOH . 
E 5 HOH A 77 677 57 HOH HOH . 
E 5 HOH A 78 678 127 HOH HOH . 
E 5 HOH A 79 679 66 HOH HOH . 
E 5 HOH A 80 680 93 HOH HOH . 
E 5 HOH A 81 681 47 HOH HOH . 
E 5 HOH A 82 682 55 HOH HOH . 
E 5 HOH A 83 683 116 HOH HOH . 
E 5 HOH A 84 684 108 HOH HOH . 
E 5 HOH A 85 685 64 HOH HOH . 
E 5 HOH A 86 686 28 HOH HOH . 
E 5 HOH A 87 687 7 HOH HOH . 
E 5 HOH A 88 688 72 HOH HOH . 
E 5 HOH A 89 689 82 HOH HOH . 
E 5 HOH A 90 690 110 HOH HOH . 
E 5 HOH A 91 691 97 HOH HOH . 
E 5 HOH A 92 692 25 HOH HOH . 
E 5 HOH A 93 693 89 HOH HOH . 
E 5 HOH A 94 694 33 HOH HOH . 
E 5 HOH A 95 695 80 HOH HOH . 
E 5 HOH A 96 696 46 HOH HOH . 
E 5 HOH A 97 697 71 HOH HOH . 
E 5 HOH A 98 698 32 HOH HOH . 
E 5 HOH A 99 699 100 HOH HOH . 
E 5 HOH A 100 700 70 HOH HOH . 
E 5 HOH A 101 701 78 HOH HOH . 
E 5 HOH A 102 702 103 HOH HOH . 
E 5 HOH A 103 703 96 HOH HOH . 
E 5 HOH A 104 704 23 HOH HOH . 
E 5 HOH A 105 705 84 HOH HOH . 
E 5 HOH A 106 706 104 HOH HOH . 
E 5 HOH A 107 707 83 HOH HOH . 
E 5 HOH A 108 708 77 HOH HOH . 
E 5 HOH A 109 709 121 HOH HOH . 
E 5 HOH A 110 710 52 HOH HOH . 
E 5 HOH A 111 711 105 HOH HOH . 
E 5 HOH A 112 712 75 HOH HOH . 
E 5 HOH A 113 713 113 HOH HOH . 
E 5 HOH A 114 714 41 HOH HOH . 
E 5 HOH A 115 715 86 HOH HOH . 
E 5 HOH A 116 716 35 HOH HOH . 
E 5 HOH A 117 717 131 HOH HOH . 
E 5 HOH A 118 718 106 HOH HOH . 
E 5 HOH A 119 719 124 HOH HOH . 
E 5 HOH A 120 720 112 HOH HOH . 
E 5 HOH A 121 721 101 HOH HOH . 
E 5 HOH A 122 722 109 HOH HOH . 
E 5 HOH A 123 723 40 HOH HOH . 
E 5 HOH A 124 724 107 HOH HOH . 
E 5 HOH A 125 725 99 HOH HOH . 
E 5 HOH A 126 726 102 HOH HOH . 
E 5 HOH A 127 727 118 HOH HOH . 
E 5 HOH A 128 728 123 HOH HOH . 
E 5 HOH A 129 729 76 HOH HOH . 
E 5 HOH A 130 730 122 HOH HOH . 
E 5 HOH A 131 731 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 0.558 31.518 13.822 1 48.02 ? C1 GOL 501 A 1 
HETATM 2 O O1 GOL . . . B 2 -0.094 31.496 12.577 1 47.88 ? O1 GOL 501 A 1 
HETATM 3 C C2 GOL . . . B 2 1.418 30.271 13.995 1 48.72 ? C2 GOL 501 A 1 
HETATM 4 O O2 GOL . . . B 2 0.687 29.117 13.642 1 49.18 ? O2 GOL 501 A 1 
HETATM 5 C C3 GOL . . . B 2 2.67 30.372 13.133 1 48.94 ? C3 GOL 501 A 1 
HETATM 6 O O3 GOL . . . B 2 3.641 31.148 13.797 1 49.48 ? O3 GOL 501 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           354 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#