data_5EOL # _model_server_result.job_id pD4VKT-9cfV0CBDJVt0W6w _model_server_result.datetime_utc '2024-10-12 14:26:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5EOL # _exptl.entry_id 5EOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5EOL _cell.length_a 96.856 _cell.length_b 96.856 _cell.length_c 80.452 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 181 n n C1 C2 GOL sing 182 n n C1 H11 GOL sing 183 n n C1 H12 GOL sing 184 n n O1 HO1 GOL sing 185 n n C2 O2 GOL sing 186 n n C2 C3 GOL sing 187 n n C2 H2 GOL sing 188 n n O2 HO2 GOL sing 189 n n C3 O3 GOL sing 190 n n C3 H31 GOL sing 191 n n C3 H32 GOL sing 192 n n O3 HO3 GOL sing 193 n n # _atom_sites.entry_id 5EOL _atom_sites.fract_transf_matrix[1][1] 0.010325 _atom_sites.fract_transf_matrix[1][2] 0.005961 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011922 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5QO A 1 401 1 5QO UNL . C 3 GOL A 1 402 1 GOL GOL . D 3 GOL A 1 403 2 GOL GOL . E 4 HOH A 1 501 93 HOH HOH . E 4 HOH A 2 502 95 HOH HOH . E 4 HOH A 3 503 74 HOH HOH . E 4 HOH A 4 504 58 HOH HOH . E 4 HOH A 5 505 18 HOH HOH . E 4 HOH A 6 506 42 HOH HOH . E 4 HOH A 7 507 48 HOH HOH . E 4 HOH A 8 508 5 HOH HOH . E 4 HOH A 9 509 16 HOH HOH . E 4 HOH A 10 510 44 HOH HOH . E 4 HOH A 11 511 81 HOH HOH . E 4 HOH A 12 512 15 HOH HOH . E 4 HOH A 13 513 28 HOH HOH . E 4 HOH A 14 514 73 HOH HOH . E 4 HOH A 15 515 38 HOH HOH . E 4 HOH A 16 516 30 HOH HOH . E 4 HOH A 17 517 3 HOH HOH . E 4 HOH A 18 518 63 HOH HOH . E 4 HOH A 19 519 17 HOH HOH . E 4 HOH A 20 520 19 HOH HOH . E 4 HOH A 21 521 55 HOH HOH . E 4 HOH A 22 522 79 HOH HOH . E 4 HOH A 23 523 72 HOH HOH . E 4 HOH A 24 524 40 HOH HOH . E 4 HOH A 25 525 47 HOH HOH . E 4 HOH A 26 526 68 HOH HOH . E 4 HOH A 27 527 76 HOH HOH . E 4 HOH A 28 528 14 HOH HOH . E 4 HOH A 29 529 35 HOH HOH . E 4 HOH A 30 530 75 HOH HOH . E 4 HOH A 31 531 80 HOH HOH . E 4 HOH A 32 532 32 HOH HOH . E 4 HOH A 33 533 52 HOH HOH . E 4 HOH A 34 534 4 HOH HOH . E 4 HOH A 35 535 49 HOH HOH . E 4 HOH A 36 536 71 HOH HOH . E 4 HOH A 37 537 21 HOH HOH . E 4 HOH A 38 538 59 HOH HOH . E 4 HOH A 39 539 36 HOH HOH . E 4 HOH A 40 540 26 HOH HOH . E 4 HOH A 41 541 20 HOH HOH . E 4 HOH A 42 542 46 HOH HOH . E 4 HOH A 43 543 65 HOH HOH . E 4 HOH A 44 544 6 HOH HOH . E 4 HOH A 45 545 27 HOH HOH . E 4 HOH A 46 546 37 HOH HOH . E 4 HOH A 47 547 60 HOH HOH . E 4 HOH A 48 548 57 HOH HOH . E 4 HOH A 49 549 13 HOH HOH . E 4 HOH A 50 550 64 HOH HOH . E 4 HOH A 51 551 54 HOH HOH . E 4 HOH A 52 552 66 HOH HOH . E 4 HOH A 53 553 29 HOH HOH . E 4 HOH A 54 554 9 HOH HOH . E 4 HOH A 55 555 22 HOH HOH . E 4 HOH A 56 556 86 HOH HOH . E 4 HOH A 57 557 51 HOH HOH . E 4 HOH A 58 558 45 HOH HOH . E 4 HOH A 59 559 62 HOH HOH . E 4 HOH A 60 560 33 HOH HOH . E 4 HOH A 61 561 31 HOH HOH . E 4 HOH A 62 562 43 HOH HOH . E 4 HOH A 63 563 7 HOH HOH . E 4 HOH A 64 564 39 HOH HOH . E 4 HOH A 65 565 61 HOH HOH . E 4 HOH A 66 566 34 HOH HOH . E 4 HOH A 67 567 91 HOH HOH . E 4 HOH A 68 568 12 HOH HOH . E 4 HOH A 69 569 50 HOH HOH . E 4 HOH A 70 570 67 HOH HOH . E 4 HOH A 71 571 77 HOH HOH . E 4 HOH A 72 572 102 HOH HOH . E 4 HOH A 73 573 25 HOH HOH . E 4 HOH A 74 574 97 HOH HOH . E 4 HOH A 75 575 94 HOH HOH . E 4 HOH A 76 576 103 HOH HOH . E 4 HOH A 77 577 41 HOH HOH . E 4 HOH A 78 578 96 HOH HOH . E 4 HOH A 79 579 24 HOH HOH . E 4 HOH A 80 580 69 HOH HOH . E 4 HOH A 81 581 8 HOH HOH . E 4 HOH A 82 582 1 HOH HOH . E 4 HOH A 83 583 11 HOH HOH . E 4 HOH A 84 584 98 HOH HOH . E 4 HOH A 85 585 23 HOH HOH . E 4 HOH A 86 586 70 HOH HOH . E 4 HOH A 87 587 10 HOH HOH . E 4 HOH A 88 588 92 HOH HOH . E 4 HOH A 89 589 88 HOH HOH . E 4 HOH A 90 590 100 HOH HOH . E 4 HOH A 91 591 2 HOH HOH . E 4 HOH A 92 592 90 HOH HOH . E 4 HOH A 93 593 101 HOH HOH . E 4 HOH A 94 594 99 HOH HOH . E 4 HOH A 95 595 85 HOH HOH . E 4 HOH A 96 596 53 HOH HOH . E 4 HOH A 97 597 87 HOH HOH . E 4 HOH A 98 598 84 HOH HOH . E 4 HOH A 99 599 82 HOH HOH . E 4 HOH A 100 600 56 HOH HOH . E 4 HOH A 101 601 83 HOH HOH . E 4 HOH A 102 602 78 HOH HOH . E 4 HOH A 103 603 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -22.961 -26.644 -16.855 1 64.15 ? C1 GOL 402 A 1 HETATM 2 O O1 GOL . . . C 3 -24.128 -25.875 -16.688 1 65.32 ? O1 GOL 402 A 1 HETATM 3 C C2 GOL . . . C 3 -23.393 -27.945 -17.476 1 65.38 ? C2 GOL 402 A 1 HETATM 4 O O2 GOL . . . C 3 -24.518 -28.424 -16.758 1 65.87 ? O2 GOL 402 A 1 HETATM 5 C C3 GOL . . . C 3 -22.254 -28.915 -17.318 1 64.65 ? C3 GOL 402 A 1 HETATM 6 O O3 GOL . . . C 3 -22.615 -30.158 -17.893 1 65.82 ? O3 GOL 402 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #