data_5EP3
#
_model_server_result.job_id            zAQCNftuH1Uf5u8n4zuS4Q 
_model_server_result.datetime_utc      '2024-11-29 14:13:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ep3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    5EP3 
#
_exptl.entry_id    5EP3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5EP3 
_cell.length_a            76.527 
_cell.length_b            76.527 
_cell.length_c            82.259 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EP3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 126 n n 
N1 C6 EPE sing 127 n n 
N1 C9 EPE sing 128 n n 
C2 C3 EPE sing 129 n n 
C2 H21 EPE sing 130 n n 
C2 H22 EPE sing 131 n n 
C3 N4 EPE sing 132 n n 
C3 H31 EPE sing 133 n n 
C3 H32 EPE sing 134 n n 
N4 C5 EPE sing 135 n n 
N4 C7 EPE sing 136 n n 
C5 C6 EPE sing 137 n n 
C5 H51 EPE sing 138 n n 
C5 H52 EPE sing 139 n n 
C6 H61 EPE sing 140 n n 
C6 H62 EPE sing 141 n n 
C7 C8 EPE sing 142 n n 
C7 H71 EPE sing 143 n n 
C7 H72 EPE sing 144 n n 
C8 O8 EPE sing 145 n n 
C8 H81 EPE sing 146 n n 
C8 H82 EPE sing 147 n n 
O8 HO8 EPE sing 148 n n 
C9 C10 EPE sing 149 n n 
C9 H91 EPE sing 150 n n 
C9 H92 EPE sing 151 n n 
C10 S EPE sing 152 n n 
C10 H101 EPE sing 153 n n 
C10 H102 EPE sing 154 n n 
S O1S EPE doub 155 n n 
S O2S EPE doub 156 n n 
S O3S EPE sing 157 n n 
O3S HOS3 EPE sing 158 n n 
#
_atom_sites.entry_id                     5EP3 
_atom_sites.fract_transf_matrix[1][1]    0.013067 
_atom_sites.fract_transf_matrix[1][2]    0.007544 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015089 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012157 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5QT A 1 401 1 5QT AZ4 . 
C 3 SO4 A 1 402 1 SO4 SO4 . 
D 4 EPE A 1 403 1 EPE EPE . 
E 5 EDO A 1 404 1 EDO EDO . 
F 6 HOH A 1 501 177 HOH HOH . 
F 6 HOH A 2 502 184 HOH HOH . 
F 6 HOH A 3 503 89 HOH HOH . 
F 6 HOH A 4 504 77 HOH HOH . 
F 6 HOH A 5 505 123 HOH HOH . 
F 6 HOH A 6 506 92 HOH HOH . 
F 6 HOH A 7 507 74 HOH HOH . 
F 6 HOH A 8 508 196 HOH HOH . 
F 6 HOH A 9 509 163 HOH HOH . 
F 6 HOH A 10 510 98 HOH HOH . 
F 6 HOH A 11 511 221 HOH HOH . 
F 6 HOH A 12 512 124 HOH HOH . 
F 6 HOH A 13 513 141 HOH HOH . 
F 6 HOH A 14 514 155 HOH HOH . 
F 6 HOH A 15 515 114 HOH HOH . 
F 6 HOH A 16 516 145 HOH HOH . 
F 6 HOH A 17 517 168 HOH HOH . 
F 6 HOH A 18 518 169 HOH HOH . 
F 6 HOH A 19 519 107 HOH HOH . 
F 6 HOH A 20 520 91 HOH HOH . 
F 6 HOH A 21 521 75 HOH HOH . 
F 6 HOH A 22 522 135 HOH HOH . 
F 6 HOH A 23 523 158 HOH HOH . 
F 6 HOH A 24 524 208 HOH HOH . 
F 6 HOH A 25 525 27 HOH HOH . 
F 6 HOH A 26 526 21 HOH HOH . 
F 6 HOH A 27 527 201 HOH HOH . 
F 6 HOH A 28 528 24 HOH HOH . 
F 6 HOH A 29 529 78 HOH HOH . 
F 6 HOH A 30 530 127 HOH HOH . 
F 6 HOH A 31 531 18 HOH HOH . 
F 6 HOH A 32 532 103 HOH HOH . 
F 6 HOH A 33 533 73 HOH HOH . 
F 6 HOH A 34 534 186 HOH HOH . 
F 6 HOH A 35 535 41 HOH HOH . 
F 6 HOH A 36 536 191 HOH HOH . 
F 6 HOH A 37 537 47 HOH HOH . 
F 6 HOH A 38 538 64 HOH HOH . 
F 6 HOH A 39 539 149 HOH HOH . 
F 6 HOH A 40 540 34 HOH HOH . 
F 6 HOH A 41 541 22 HOH HOH . 
F 6 HOH A 42 542 37 HOH HOH . 
F 6 HOH A 43 543 90 HOH HOH . 
F 6 HOH A 44 544 25 HOH HOH . 
F 6 HOH A 45 545 51 HOH HOH . 
F 6 HOH A 46 546 55 HOH HOH . 
F 6 HOH A 47 547 16 HOH HOH . 
F 6 HOH A 48 548 112 HOH HOH . 
F 6 HOH A 49 549 31 HOH HOH . 
F 6 HOH A 50 550 40 HOH HOH . 
F 6 HOH A 51 551 96 HOH HOH . 
F 6 HOH A 52 552 11 HOH HOH . 
F 6 HOH A 53 553 187 HOH HOH . 
F 6 HOH A 54 554 119 HOH HOH . 
F 6 HOH A 55 555 57 HOH HOH . 
F 6 HOH A 56 556 76 HOH HOH . 
F 6 HOH A 57 557 33 HOH HOH . 
F 6 HOH A 58 558 39 HOH HOH . 
F 6 HOH A 59 559 23 HOH HOH . 
F 6 HOH A 60 560 86 HOH HOH . 
F 6 HOH A 61 561 53 HOH HOH . 
F 6 HOH A 62 562 110 HOH HOH . 
F 6 HOH A 63 563 6 HOH HOH . 
F 6 HOH A 64 564 1 HOH HOH . 
F 6 HOH A 65 565 7 HOH HOH . 
F 6 HOH A 66 566 8 HOH HOH . 
F 6 HOH A 67 567 71 HOH HOH . 
F 6 HOH A 68 568 58 HOH HOH . 
F 6 HOH A 69 569 9 HOH HOH . 
F 6 HOH A 70 570 159 HOH HOH . 
F 6 HOH A 71 571 46 HOH HOH . 
F 6 HOH A 72 572 30 HOH HOH . 
F 6 HOH A 73 573 146 HOH HOH . 
F 6 HOH A 74 574 183 HOH HOH . 
F 6 HOH A 75 575 118 HOH HOH . 
F 6 HOH A 76 576 63 HOH HOH . 
F 6 HOH A 77 577 223 HOH HOH . 
F 6 HOH A 78 578 152 HOH HOH . 
F 6 HOH A 79 579 95 HOH HOH . 
F 6 HOH A 80 580 4 HOH HOH . 
F 6 HOH A 81 581 5 HOH HOH . 
F 6 HOH A 82 582 28 HOH HOH . 
F 6 HOH A 83 583 195 HOH HOH . 
F 6 HOH A 84 584 212 HOH HOH . 
F 6 HOH A 85 585 94 HOH HOH . 
F 6 HOH A 86 586 72 HOH HOH . 
F 6 HOH A 87 587 70 HOH HOH . 
F 6 HOH A 88 588 15 HOH HOH . 
F 6 HOH A 89 589 45 HOH HOH . 
F 6 HOH A 90 590 116 HOH HOH . 
F 6 HOH A 91 591 101 HOH HOH . 
F 6 HOH A 92 592 10 HOH HOH . 
F 6 HOH A 93 593 32 HOH HOH . 
F 6 HOH A 94 594 61 HOH HOH . 
F 6 HOH A 95 595 17 HOH HOH . 
F 6 HOH A 96 596 12 HOH HOH . 
F 6 HOH A 97 597 59 HOH HOH . 
F 6 HOH A 98 598 35 HOH HOH . 
F 6 HOH A 99 599 79 HOH HOH . 
F 6 HOH A 100 600 26 HOH HOH . 
F 6 HOH A 101 601 210 HOH HOH . 
F 6 HOH A 102 602 132 HOH HOH . 
F 6 HOH A 103 603 153 HOH HOH . 
F 6 HOH A 104 604 138 HOH HOH . 
F 6 HOH A 105 605 42 HOH HOH . 
F 6 HOH A 106 606 66 HOH HOH . 
F 6 HOH A 107 607 38 HOH HOH . 
F 6 HOH A 108 608 13 HOH HOH . 
F 6 HOH A 109 609 181 HOH HOH . 
F 6 HOH A 110 610 143 HOH HOH . 
F 6 HOH A 111 611 54 HOH HOH . 
F 6 HOH A 112 612 109 HOH HOH . 
F 6 HOH A 113 613 204 HOH HOH . 
F 6 HOH A 114 614 69 HOH HOH . 
F 6 HOH A 115 615 88 HOH HOH . 
F 6 HOH A 116 616 85 HOH HOH . 
F 6 HOH A 117 617 106 HOH HOH . 
F 6 HOH A 118 618 48 HOH HOH . 
F 6 HOH A 119 619 29 HOH HOH . 
F 6 HOH A 120 620 82 HOH HOH . 
F 6 HOH A 121 621 19 HOH HOH . 
F 6 HOH A 122 622 93 HOH HOH . 
F 6 HOH A 123 623 87 HOH HOH . 
F 6 HOH A 124 624 179 HOH HOH . 
F 6 HOH A 125 625 97 HOH HOH . 
F 6 HOH A 126 626 50 HOH HOH . 
F 6 HOH A 127 627 174 HOH HOH . 
F 6 HOH A 128 628 121 HOH HOH . 
F 6 HOH A 129 629 150 HOH HOH . 
F 6 HOH A 130 630 44 HOH HOH . 
F 6 HOH A 131 631 154 HOH HOH . 
F 6 HOH A 132 632 56 HOH HOH . 
F 6 HOH A 133 633 14 HOH HOH . 
F 6 HOH A 134 634 2 HOH HOH . 
F 6 HOH A 135 635 67 HOH HOH . 
F 6 HOH A 136 636 99 HOH HOH . 
F 6 HOH A 137 637 100 HOH HOH . 
F 6 HOH A 138 638 108 HOH HOH . 
F 6 HOH A 139 639 81 HOH HOH . 
F 6 HOH A 140 640 129 HOH HOH . 
F 6 HOH A 141 641 115 HOH HOH . 
F 6 HOH A 142 642 20 HOH HOH . 
F 6 HOH A 143 643 43 HOH HOH . 
F 6 HOH A 144 644 136 HOH HOH . 
F 6 HOH A 145 645 60 HOH HOH . 
F 6 HOH A 146 646 113 HOH HOH . 
F 6 HOH A 147 647 49 HOH HOH . 
F 6 HOH A 148 648 104 HOH HOH . 
F 6 HOH A 149 649 36 HOH HOH . 
F 6 HOH A 150 650 137 HOH HOH . 
F 6 HOH A 151 651 105 HOH HOH . 
F 6 HOH A 152 652 164 HOH HOH . 
F 6 HOH A 153 653 200 HOH HOH . 
F 6 HOH A 154 654 172 HOH HOH . 
F 6 HOH A 155 655 62 HOH HOH . 
F 6 HOH A 156 656 3 HOH HOH . 
F 6 HOH A 157 657 65 HOH HOH . 
F 6 HOH A 158 658 171 HOH HOH . 
F 6 HOH A 159 659 224 HOH HOH . 
F 6 HOH A 160 660 206 HOH HOH . 
F 6 HOH A 161 661 166 HOH HOH . 
F 6 HOH A 162 662 142 HOH HOH . 
F 6 HOH A 163 663 197 HOH HOH . 
F 6 HOH A 164 664 218 HOH HOH . 
F 6 HOH A 165 665 156 HOH HOH . 
F 6 HOH A 166 666 222 HOH HOH . 
F 6 HOH A 167 667 175 HOH HOH . 
F 6 HOH A 168 668 202 HOH HOH . 
F 6 HOH A 169 669 83 HOH HOH . 
F 6 HOH A 170 670 193 HOH HOH . 
F 6 HOH A 171 671 130 HOH HOH . 
F 6 HOH A 172 672 219 HOH HOH . 
F 6 HOH A 173 673 189 HOH HOH . 
F 6 HOH A 174 674 182 HOH HOH . 
F 6 HOH A 175 675 173 HOH HOH . 
F 6 HOH A 176 676 220 HOH HOH . 
F 6 HOH A 177 677 148 HOH HOH . 
F 6 HOH A 178 678 139 HOH HOH . 
F 6 HOH A 179 679 190 HOH HOH . 
F 6 HOH A 180 680 192 HOH HOH . 
F 6 HOH A 181 681 134 HOH HOH . 
F 6 HOH A 182 682 194 HOH HOH . 
F 6 HOH A 183 683 131 HOH HOH . 
F 6 HOH A 184 684 215 HOH HOH . 
F 6 HOH A 185 685 126 HOH HOH . 
F 6 HOH A 186 686 176 HOH HOH . 
F 6 HOH A 187 687 162 HOH HOH . 
F 6 HOH A 188 688 102 HOH HOH . 
F 6 HOH A 189 689 117 HOH HOH . 
F 6 HOH A 190 690 157 HOH HOH . 
F 6 HOH A 191 691 52 HOH HOH . 
F 6 HOH A 192 692 128 HOH HOH . 
F 6 HOH A 193 693 144 HOH HOH . 
F 6 HOH A 194 694 185 HOH HOH . 
F 6 HOH A 195 695 133 HOH HOH . 
F 6 HOH A 196 696 211 HOH HOH . 
F 6 HOH A 197 697 207 HOH HOH . 
F 6 HOH A 198 698 165 HOH HOH . 
F 6 HOH A 199 699 151 HOH HOH . 
F 6 HOH A 200 700 125 HOH HOH . 
F 6 HOH A 201 701 216 HOH HOH . 
F 6 HOH A 202 702 178 HOH HOH . 
F 6 HOH A 203 703 198 HOH HOH . 
F 6 HOH A 204 704 188 HOH HOH . 
F 6 HOH A 205 705 80 HOH HOH . 
F 6 HOH A 206 706 120 HOH HOH . 
F 6 HOH A 207 707 68 HOH HOH . 
F 6 HOH A 208 708 147 HOH HOH . 
F 6 HOH A 209 709 161 HOH HOH . 
F 6 HOH A 210 710 122 HOH HOH . 
F 6 HOH A 211 711 209 HOH HOH . 
F 6 HOH A 212 712 214 HOH HOH . 
F 6 HOH A 213 713 84 HOH HOH . 
F 6 HOH A 214 714 205 HOH HOH . 
F 6 HOH A 215 715 180 HOH HOH . 
F 6 HOH A 216 716 170 HOH HOH . 
F 6 HOH A 217 717 203 HOH HOH . 
F 6 HOH A 218 718 213 HOH HOH . 
F 6 HOH A 219 719 111 HOH HOH . 
F 6 HOH A 220 720 199 HOH HOH . 
F 6 HOH A 221 721 160 HOH HOH . 
F 6 HOH A 222 722 167 HOH HOH . 
F 6 HOH A 223 723 217 HOH HOH . 
F 6 HOH A 224 724 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . D 4 5.71 75.821 21.49 0.72 33.13 ? N1 EPE 403 A 1 
HETATM 2 C C2 EPE . . . D 4 5.538 76.409 20.154 0.72 38.2 ? C2 EPE 403 A 1 
HETATM 3 C C3 EPE . . . D 4 6.469 75.682 19.194 0.72 31.57 ? C3 EPE 403 A 1 
HETATM 4 N N4 EPE . . . D 4 6.082 74.29 19.095 0.72 37.26 ? N4 EPE 403 A 1 
HETATM 5 C C5 EPE . . . D 4 5.202 73.76 20.123 0.72 37.42 ? C5 EPE 403 A 1 
HETATM 6 C C6 EPE . . . D 4 5.387 74.379 21.509 0.72 35.34 ? C6 EPE 403 A 1 
HETATM 7 C C7 EPE . . . D 4 6.007 73.707 17.768 0.72 32.48 ? C7 EPE 403 A 1 
HETATM 8 C C8 EPE . . . D 4 5.423 72.295 17.77 0.72 31.1 ? C8 EPE 403 A 1 
HETATM 9 O O8 EPE . . . D 4 6.388 71.372 18.226 0.72 31.61 ? O8 EPE 403 A 1 
HETATM 10 C C9 EPE . . . D 4 4.844 76.537 22.438 0.72 37.86 ? C9 EPE 403 A 1 
HETATM 11 C C10 EPE . . . D 4 5.19 76.101 23.854 0.72 35.41 ? C10 EPE 403 A 1 
HETATM 12 S S EPE . . . D 4 4.889 77.415 25.056 0.72 45.18 ? S EPE 403 A 1 
HETATM 13 O O1S EPE . . . D 4 3.511 77.864 24.877 0.72 42.26 ? O1S EPE 403 A 1 
HETATM 14 O O2S EPE . . . D 4 5.779 78.55 24.822 0.72 30.95 ? O2S EPE 403 A 1 
HETATM 15 O O3S EPE . . . D 4 5.115 76.881 26.4 0.72 26.94 ? O3S EPE 403 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           15 
#