data_5EPR
#
_model_server_result.job_id            aVKILIY8Q-WXDcGXFJQ46g 
_model_server_result.datetime_utc      '2024-11-22 12:14:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5epr 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":801}' 
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_entry.id    5EPR 
#
_exptl.entry_id    5EPR 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              162.188 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3~{S})-3-methyl-3,4-dihydro-1~{H}-quinoxalin-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5EPR 
_cell.length_a            60.92 
_cell.length_b            60.92 
_cell.length_c            63.02 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5EPR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C9 H10 N2 O' 
_chem_comp.formula_weight    162.188 
_chem_comp.id                5QY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3~{S})-3-methyl-3,4-dihydro-1~{H}-quinoxalin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C 5QY doub 1 n n 
C NAG 5QY sing 2 n n 
C CA 5QY sing 3 n n 
CB CA 5QY sing 4 n n 
NAG CAJ 5QY sing 5 n n 
CA N 5QY sing 6 n n 
CAJ CAE 5QY doub 7 n y 
CAJ CAK 5QY sing 8 n y 
N CAK 5QY sing 9 n n 
CAE CAC 5QY sing 10 n y 
CAK CAF 5QY doub 11 n y 
CAC CAD 5QY doub 12 n y 
CAF CAD 5QY sing 13 n y 
NAG H1 5QY sing 14 n n 
CAE H2 5QY sing 15 n n 
CAC H3 5QY sing 16 n n 
CAD H4 5QY sing 17 n n 
CAF H5 5QY sing 18 n n 
N H6 5QY sing 19 n n 
CA H7 5QY sing 20 n n 
CB H8 5QY sing 21 n n 
CB H9 5QY sing 22 n n 
CB H10 5QY sing 23 n n 
#
_atom_sites.entry_id                     5EPR 
_atom_sites.fract_transf_matrix[1][1]    0.016415 
_atom_sites.fract_transf_matrix[1][2]    0.009477 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018954 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5QY A 1 801 1 5QY DRG . 
C 3 NO3 A 1 802 1 NO3 NO3 . 
D 4 HOH A 1 901 62 HOH HOH . 
D 4 HOH A 2 902 18 HOH HOH . 
D 4 HOH A 3 903 60 HOH HOH . 
D 4 HOH A 4 904 20 HOH HOH . 
D 4 HOH A 5 905 38 HOH HOH . 
D 4 HOH A 6 906 103 HOH HOH . 
D 4 HOH A 7 907 58 HOH HOH . 
D 4 HOH A 8 908 104 HOH HOH . 
D 4 HOH A 9 909 101 HOH HOH . 
D 4 HOH A 10 910 4 HOH HOH . 
D 4 HOH A 11 911 19 HOH HOH . 
D 4 HOH A 12 912 53 HOH HOH . 
D 4 HOH A 13 913 16 HOH HOH . 
D 4 HOH A 14 914 17 HOH HOH . 
D 4 HOH A 15 915 26 HOH HOH . 
D 4 HOH A 16 916 40 HOH HOH . 
D 4 HOH A 17 917 1 HOH HOH . 
D 4 HOH A 18 918 48 HOH HOH . 
D 4 HOH A 19 919 13 HOH HOH . 
D 4 HOH A 20 920 2 HOH HOH . 
D 4 HOH A 21 921 6 HOH HOH . 
D 4 HOH A 22 922 33 HOH HOH . 
D 4 HOH A 23 923 61 HOH HOH . 
D 4 HOH A 24 924 89 HOH HOH . 
D 4 HOH A 25 925 50 HOH HOH . 
D 4 HOH A 26 926 27 HOH HOH . 
D 4 HOH A 27 927 21 HOH HOH . 
D 4 HOH A 28 928 10 HOH HOH . 
D 4 HOH A 29 929 67 HOH HOH . 
D 4 HOH A 30 930 28 HOH HOH . 
D 4 HOH A 31 931 37 HOH HOH . 
D 4 HOH A 32 932 24 HOH HOH . 
D 4 HOH A 33 933 55 HOH HOH . 
D 4 HOH A 34 934 23 HOH HOH . 
D 4 HOH A 35 935 12 HOH HOH . 
D 4 HOH A 36 936 57 HOH HOH . 
D 4 HOH A 37 937 34 HOH HOH . 
D 4 HOH A 38 938 46 HOH HOH . 
D 4 HOH A 39 939 15 HOH HOH . 
D 4 HOH A 40 940 75 HOH HOH . 
D 4 HOH A 41 941 42 HOH HOH . 
D 4 HOH A 42 942 52 HOH HOH . 
D 4 HOH A 43 943 8 HOH HOH . 
D 4 HOH A 44 944 41 HOH HOH . 
D 4 HOH A 45 945 44 HOH HOH . 
D 4 HOH A 46 946 3 HOH HOH . 
D 4 HOH A 47 947 32 HOH HOH . 
D 4 HOH A 48 948 9 HOH HOH . 
D 4 HOH A 49 949 71 HOH HOH . 
D 4 HOH A 50 950 5 HOH HOH . 
D 4 HOH A 51 951 7 HOH HOH . 
D 4 HOH A 52 952 29 HOH HOH . 
D 4 HOH A 53 953 14 HOH HOH . 
D 4 HOH A 54 954 45 HOH HOH . 
D 4 HOH A 55 955 69 HOH HOH . 
D 4 HOH A 56 956 39 HOH HOH . 
D 4 HOH A 57 957 100 HOH HOH . 
D 4 HOH A 58 958 102 HOH HOH . 
D 4 HOH A 59 959 25 HOH HOH . 
D 4 HOH A 60 960 22 HOH HOH . 
D 4 HOH A 61 961 92 HOH HOH . 
D 4 HOH A 62 962 66 HOH HOH . 
D 4 HOH A 63 963 65 HOH HOH . 
D 4 HOH A 64 964 59 HOH HOH . 
D 4 HOH A 65 965 31 HOH HOH . 
D 4 HOH A 66 966 63 HOH HOH . 
D 4 HOH A 67 967 47 HOH HOH . 
D 4 HOH A 68 968 82 HOH HOH . 
D 4 HOH A 69 969 30 HOH HOH . 
D 4 HOH A 70 970 43 HOH HOH . 
D 4 HOH A 71 971 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O 5QY . . . B 2 14.607 0.64 -8.755 1 41.74 ? O 5QY 801 A 1 
HETATM 2 C C 5QY . . . B 2 14.364 1.124 -7.65 1 48.15 ? C 5QY 801 A 1 
HETATM 3 N NAG 5QY . . . B 2 13.127 0.836 -7.061 1 56.36 ? NAG 5QY 801 A 1 
HETATM 4 C CAJ 5QY . . . B 2 12.797 1.33 -5.797 1 62.02 ? CAJ 5QY 801 A 1 
HETATM 5 C CAE 5QY . . . B 2 11.516 1.164 -5.284 1 67.77 ? CAE 5QY 801 A 1 
HETATM 6 C CAC 5QY . . . B 2 11.203 1.646 -4.017 1 74.12 ? CAC 5QY 801 A 1 
HETATM 7 C CAD 5QY . . . B 2 12.177 2.287 -3.26 1 74.61 ? CAD 5QY 801 A 1 
HETATM 8 C CAF 5QY . . . B 2 13.461 2.442 -3.771 1 70.33 ? CAF 5QY 801 A 1 
HETATM 9 C CAK 5QY . . . B 2 13.771 1.96 -5.041 1 62.92 ? CAK 5QY 801 A 1 
HETATM 10 N N 5QY . . . B 2 15.058 2.114 -5.569 1 55.73 ? N 5QY 801 A 1 
HETATM 11 C CA 5QY . . . B 2 15.27 2.002 -7.036 1 48.12 ? CA 5QY 801 A 1 
HETATM 12 C CB 5QY . . . B 2 16.71 1.6 -7.36 1 51.51 ? CB 5QY 801 A 1 
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_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           12 
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