data_5EPY # _model_server_result.job_id 3q7caDC1z6Q9uj5Pko2xGA _model_server_result.datetime_utc '2024-12-12 16:49:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5epy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 5EPY # _exptl.entry_id 5EPY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EPY _cell.length_a 54.994 _cell.length_b 58.44 _cell.length_c 60.089 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EPY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 116 A CYS 1097 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A SG CYS 118 A CYS 1099 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc3 A SG CYS 164 A CYS 1145 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc4 A ND1 HIS 168 A HIS 1149 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EPY _atom_sites.fract_transf_matrix[1][1] 0.018184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1201 1 ZN ZN . C 3 SO4 A 1 1202 1 SO4 SO4 . D 4 5R2 A 1 1203 1 5R2 LIG . E 5 HOH A 1 1301 1 HOH HOH . E 5 HOH A 2 1302 56 HOH HOH . E 5 HOH A 3 1303 41 HOH HOH . E 5 HOH A 4 1304 10 HOH HOH . E 5 HOH A 5 1305 22 HOH HOH . E 5 HOH A 6 1306 55 HOH HOH . E 5 HOH A 7 1307 18 HOH HOH . E 5 HOH A 8 1308 35 HOH HOH . E 5 HOH A 9 1309 17 HOH HOH . E 5 HOH A 10 1310 42 HOH HOH . E 5 HOH A 11 1311 34 HOH HOH . E 5 HOH A 12 1312 3 HOH HOH . E 5 HOH A 13 1313 44 HOH HOH . E 5 HOH A 14 1314 27 HOH HOH . E 5 HOH A 15 1315 21 HOH HOH . E 5 HOH A 16 1316 48 HOH HOH . E 5 HOH A 17 1317 63 HOH HOH . E 5 HOH A 18 1318 7 HOH HOH . E 5 HOH A 19 1319 6 HOH HOH . E 5 HOH A 20 1320 61 HOH HOH . E 5 HOH A 21 1321 32 HOH HOH . E 5 HOH A 22 1322 43 HOH HOH . E 5 HOH A 23 1323 26 HOH HOH . E 5 HOH A 24 1324 29 HOH HOH . E 5 HOH A 25 1325 16 HOH HOH . E 5 HOH A 26 1326 66 HOH HOH . E 5 HOH A 27 1327 70 HOH HOH . E 5 HOH A 28 1328 50 HOH HOH . E 5 HOH A 29 1329 11 HOH HOH . E 5 HOH A 30 1330 37 HOH HOH . E 5 HOH A 31 1331 4 HOH HOH . E 5 HOH A 32 1332 2 HOH HOH . E 5 HOH A 33 1333 40 HOH HOH . E 5 HOH A 34 1334 5 HOH HOH . E 5 HOH A 35 1335 47 HOH HOH . E 5 HOH A 36 1336 15 HOH HOH . E 5 HOH A 37 1337 30 HOH HOH . E 5 HOH A 38 1338 54 HOH HOH . E 5 HOH A 39 1339 72 HOH HOH . E 5 HOH A 40 1340 12 HOH HOH . E 5 HOH A 41 1341 33 HOH HOH . E 5 HOH A 42 1342 31 HOH HOH . E 5 HOH A 43 1343 36 HOH HOH . E 5 HOH A 44 1344 59 HOH HOH . E 5 HOH A 45 1345 25 HOH HOH . E 5 HOH A 46 1346 13 HOH HOH . E 5 HOH A 47 1347 14 HOH HOH . E 5 HOH A 48 1348 24 HOH HOH . E 5 HOH A 49 1349 67 HOH HOH . E 5 HOH A 50 1350 8 HOH HOH . E 5 HOH A 51 1351 38 HOH HOH . E 5 HOH A 52 1352 68 HOH HOH . E 5 HOH A 53 1353 65 HOH HOH . E 5 HOH A 54 1354 9 HOH HOH . E 5 HOH A 55 1355 23 HOH HOH . E 5 HOH A 56 1356 19 HOH HOH . E 5 HOH A 57 1357 51 HOH HOH . E 5 HOH A 58 1358 53 HOH HOH . E 5 HOH A 59 1359 78 HOH HOH . E 5 HOH A 60 1360 74 HOH HOH . E 5 HOH A 61 1361 77 HOH HOH . E 5 HOH A 62 1362 52 HOH HOH . E 5 HOH A 63 1363 64 HOH HOH . E 5 HOH A 64 1364 46 HOH HOH . E 5 HOH A 65 1365 75 HOH HOH . E 5 HOH A 66 1366 28 HOH HOH . E 5 HOH A 67 1367 69 HOH HOH . E 5 HOH A 68 1368 71 HOH HOH . E 5 HOH A 69 1369 60 HOH HOH . E 5 HOH A 70 1370 39 HOH HOH . E 5 HOH A 71 1371 76 HOH HOH . E 5 HOH A 72 1372 20 HOH HOH . E 5 HOH A 73 1373 45 HOH HOH . E 5 HOH A 74 1374 73 HOH HOH . E 5 HOH A 75 1375 57 HOH HOH . E 5 HOH A 76 1376 62 HOH HOH . E 5 HOH A 77 1377 49 HOH HOH . E 5 HOH A 78 1378 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -9.362 _atom_site.Cartn_y -6.308 _atom_site.Cartn_z 39.199 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #