data_5ERC # _model_server_result.job_id neMdpk0_oeaFC2b4aRqy5g _model_server_result.datetime_utc '2024-10-19 17:25:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5erc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5ERC # _exptl.entry_id 5ERC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ERC _cell.length_a 73.87 _cell.length_b 73.87 _cell.length_c 147.13 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ERC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 3 A CYS 276 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc2 A SG CYS 6 A CYS 279 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc3 A SG CYS 20 A CYS 293 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A SG CYS 23 A CYS 296 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc5 A ND1 HIS 28 A HIS 301 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc6 A SG CYS 31 A CYS 304 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc7 A SG CYS 44 A CYS 317 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc8 A SG CYS 47 A CYS 320 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc9 A SG CYS 57 A CYS 330 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc10 A SG CYS 60 A CYS 333 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc11 A O GLY 73 A GLY 346 1_555 G CA CA . A CA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc12 A O GLY 73 A GLY 346 1_555 G CA CA . A CA 506 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc13 A ND1 HIS 77 A HIS 350 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc14 A SG CYS 80 A CYS 353 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc15 A SG CYS 113 A CYS 386 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc16 A SG CYS 116 A CYS 389 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc17 A SG CYS 127 A CYS 400 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc18 A SG CYS 132 A CYS 405 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc19 A ND1 HIS 137 A HIS 410 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc20 A SG CYS 140 A CYS 413 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc21 A SG CYS 171 A CYS 444 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc22 A ND1 HIS 174 A HIS 447 1_555 F ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc23 G CA CA . A CA 506 1_555 H O HOH . A HOH 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc24 G CA CA . A CA 506 1_555 H O HOH . A HOH 693 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc25 G CA CA . A CA 506 1_555 H O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc26 G CA CA . A CA 506 1_555 H O HOH . A HOH 713 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc27 G CA CA . A CA 506 1_555 H O HOH . A HOH 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc28 G CA CA . A CA 506 1_555 H O HOH . A HOH 748 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ERC _atom_sites.fract_transf_matrix[1][1] 0.013537 _atom_sites.fract_transf_matrix[1][2] 0.007816 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015632 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 17 ZN ZN . C 2 ZN A 1 502 18 ZN ZN . D 2 ZN A 1 503 19 ZN ZN . E 2 ZN A 1 504 20 ZN ZN . F 2 ZN A 1 505 21 ZN ZN . G 3 CA A 1 506 1 CA CA . H 4 HOH A 1 601 135 HOH HOH . H 4 HOH A 2 602 97 HOH HOH . H 4 HOH A 3 603 148 HOH HOH . H 4 HOH A 4 604 4 HOH HOH . H 4 HOH A 5 605 88 HOH HOH . H 4 HOH A 6 606 72 HOH HOH . H 4 HOH A 7 607 81 HOH HOH . H 4 HOH A 8 608 57 HOH HOH . H 4 HOH A 9 609 49 HOH HOH . H 4 HOH A 10 610 2 HOH HOH . H 4 HOH A 11 611 54 HOH HOH . H 4 HOH A 12 612 98 HOH HOH . H 4 HOH A 13 613 114 HOH HOH . H 4 HOH A 14 614 56 HOH HOH . H 4 HOH A 15 615 108 HOH HOH . H 4 HOH A 16 616 46 HOH HOH . H 4 HOH A 17 617 71 HOH HOH . H 4 HOH A 18 618 14 HOH HOH . H 4 HOH A 19 619 139 HOH HOH . H 4 HOH A 20 620 89 HOH HOH . H 4 HOH A 21 621 16 HOH HOH . H 4 HOH A 22 622 110 HOH HOH . H 4 HOH A 23 623 1 HOH HOH . H 4 HOH A 24 624 115 HOH HOH . H 4 HOH A 25 625 47 HOH HOH . H 4 HOH A 26 626 42 HOH HOH . H 4 HOH A 27 627 17 HOH HOH . H 4 HOH A 28 628 10 HOH HOH . H 4 HOH A 29 629 23 HOH HOH . H 4 HOH A 30 630 83 HOH HOH . H 4 HOH A 31 631 15 HOH HOH . H 4 HOH A 32 632 33 HOH HOH . H 4 HOH A 33 633 104 HOH HOH . H 4 HOH A 34 634 20 HOH HOH . H 4 HOH A 35 635 12 HOH HOH . H 4 HOH A 36 636 145 HOH HOH . H 4 HOH A 37 637 34 HOH HOH . H 4 HOH A 38 638 21 HOH HOH . H 4 HOH A 39 639 11 HOH HOH . H 4 HOH A 40 640 87 HOH HOH . H 4 HOH A 41 641 44 HOH HOH . H 4 HOH A 42 642 84 HOH HOH . H 4 HOH A 43 643 52 HOH HOH . H 4 HOH A 44 644 80 HOH HOH . H 4 HOH A 45 645 25 HOH HOH . H 4 HOH A 46 646 78 HOH HOH . H 4 HOH A 47 647 3 HOH HOH . H 4 HOH A 48 648 90 HOH HOH . H 4 HOH A 49 649 32 HOH HOH . H 4 HOH A 50 650 43 HOH HOH . H 4 HOH A 51 651 24 HOH HOH . H 4 HOH A 52 652 63 HOH HOH . H 4 HOH A 53 653 31 HOH HOH . H 4 HOH A 54 654 30 HOH HOH . H 4 HOH A 55 655 86 HOH HOH . H 4 HOH A 56 656 55 HOH HOH . H 4 HOH A 57 657 69 HOH HOH . H 4 HOH A 58 658 41 HOH HOH . H 4 HOH A 59 659 113 HOH HOH . H 4 HOH A 60 660 22 HOH HOH . H 4 HOH A 61 661 19 HOH HOH . H 4 HOH A 62 662 67 HOH HOH . H 4 HOH A 63 663 53 HOH HOH . H 4 HOH A 64 664 9 HOH HOH . H 4 HOH A 65 665 141 HOH HOH . H 4 HOH A 66 666 76 HOH HOH . H 4 HOH A 67 667 99 HOH HOH . H 4 HOH A 68 668 155 HOH HOH . H 4 HOH A 69 669 29 HOH HOH . H 4 HOH A 70 670 124 HOH HOH . H 4 HOH A 71 671 13 HOH HOH . H 4 HOH A 72 672 129 HOH HOH . H 4 HOH A 73 673 28 HOH HOH . H 4 HOH A 74 674 128 HOH HOH . H 4 HOH A 75 675 37 HOH HOH . H 4 HOH A 76 676 77 HOH HOH . H 4 HOH A 77 677 151 HOH HOH . H 4 HOH A 78 678 65 HOH HOH . H 4 HOH A 79 679 8 HOH HOH . H 4 HOH A 80 680 62 HOH HOH . H 4 HOH A 81 681 149 HOH HOH . H 4 HOH A 82 682 68 HOH HOH . H 4 HOH A 83 683 106 HOH HOH . H 4 HOH A 84 684 121 HOH HOH . H 4 HOH A 85 685 95 HOH HOH . H 4 HOH A 86 686 70 HOH HOH . H 4 HOH A 87 687 96 HOH HOH . H 4 HOH A 88 688 66 HOH HOH . H 4 HOH A 89 689 92 HOH HOH . H 4 HOH A 90 690 118 HOH HOH . H 4 HOH A 91 691 58 HOH HOH . H 4 HOH A 92 692 125 HOH HOH . H 4 HOH A 93 693 35 HOH HOH . H 4 HOH A 94 694 38 HOH HOH . H 4 HOH A 95 695 112 HOH HOH . H 4 HOH A 96 696 51 HOH HOH . H 4 HOH A 97 697 40 HOH HOH . H 4 HOH A 98 698 103 HOH HOH . H 4 HOH A 99 699 18 HOH HOH . H 4 HOH A 100 700 73 HOH HOH . H 4 HOH A 101 701 138 HOH HOH . H 4 HOH A 102 702 74 HOH HOH . H 4 HOH A 103 703 102 HOH HOH . H 4 HOH A 104 704 50 HOH HOH . H 4 HOH A 105 705 126 HOH HOH . H 4 HOH A 106 706 93 HOH HOH . H 4 HOH A 107 707 130 HOH HOH . H 4 HOH A 108 708 137 HOH HOH . H 4 HOH A 109 709 64 HOH HOH . H 4 HOH A 110 710 161 HOH HOH . H 4 HOH A 111 711 136 HOH HOH . H 4 HOH A 112 712 5 HOH HOH . H 4 HOH A 113 713 156 HOH HOH . H 4 HOH A 114 714 48 HOH HOH . H 4 HOH A 115 715 111 HOH HOH . H 4 HOH A 116 716 6 HOH HOH . H 4 HOH A 117 717 85 HOH HOH . H 4 HOH A 118 718 159 HOH HOH . H 4 HOH A 119 719 134 HOH HOH . H 4 HOH A 120 720 7 HOH HOH . H 4 HOH A 121 721 61 HOH HOH . H 4 HOH A 122 722 39 HOH HOH . H 4 HOH A 123 723 144 HOH HOH . H 4 HOH A 124 724 153 HOH HOH . H 4 HOH A 125 725 116 HOH HOH . H 4 HOH A 126 726 143 HOH HOH . H 4 HOH A 127 727 27 HOH HOH . H 4 HOH A 128 728 158 HOH HOH . H 4 HOH A 129 729 79 HOH HOH . H 4 HOH A 130 730 160 HOH HOH . H 4 HOH A 131 731 132 HOH HOH . H 4 HOH A 132 732 150 HOH HOH . H 4 HOH A 133 733 105 HOH HOH . H 4 HOH A 134 734 100 HOH HOH . H 4 HOH A 135 735 26 HOH HOH . H 4 HOH A 136 736 147 HOH HOH . H 4 HOH A 137 737 120 HOH HOH . H 4 HOH A 138 738 157 HOH HOH . H 4 HOH A 139 739 59 HOH HOH . H 4 HOH A 140 740 131 HOH HOH . H 4 HOH A 141 741 107 HOH HOH . H 4 HOH A 142 742 109 HOH HOH . H 4 HOH A 143 743 154 HOH HOH . H 4 HOH A 144 744 142 HOH HOH . H 4 HOH A 145 745 60 HOH HOH . H 4 HOH A 146 746 117 HOH HOH . H 4 HOH A 147 747 152 HOH HOH . H 4 HOH A 148 748 36 HOH HOH . H 4 HOH A 149 749 94 HOH HOH . H 4 HOH A 150 750 127 HOH HOH . H 4 HOH A 151 751 91 HOH HOH . H 4 HOH A 152 752 119 HOH HOH . H 4 HOH A 153 753 146 HOH HOH . H 4 HOH A 154 754 101 HOH HOH . H 4 HOH A 155 755 82 HOH HOH . H 4 HOH A 156 756 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.348 _atom_site.Cartn_y 48.045 _atom_site.Cartn_z 62.407 _atom_site.occupancy 0.77 _atom_site.B_iso_or_equiv 22.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #