data_5ES7 # _model_server_result.job_id XW-7Q_qygOqnQKFlX7f5XA _model_server_result.datetime_utc '2024-10-12 11:11:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5es7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 5ES7 # _exptl.entry_id 5ES7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.439 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ES7 _cell.length_a 160.943 _cell.length_b 160.943 _cell.length_c 137.581 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ES7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H23 N7 O7' _chem_comp.formula_weight 473.439 _chem_comp.id FON _chem_comp.mon_nstd_flag . _chem_comp.name 'N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[6R]-5-FORMYL-5,6,7,8-TETRAHYDROFOLATE;6R-FOLINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FON sing 134 n y N1 C8A FON sing 135 n y N1 HN1 FON sing 136 n n C2 NA2 FON sing 137 n n C2 N3 FON doub 138 n y NA2 HN21 FON sing 139 n n NA2 HN22 FON sing 140 n n N3 C4 FON sing 141 n y C4 O4 FON doub 142 n n C4 C4A FON sing 143 n y C4A N5 FON sing 144 n n C4A C8A FON doub 145 n y N5 C6 FON sing 146 n n N5 CP1 FON sing 147 n n C6 C7 FON sing 148 n n C6 C9 FON sing 149 n n C6 H61 FON sing 150 n n C7 N8 FON sing 151 n n C7 H7 FON sing 152 n n C7 HC72 FON sing 153 n n N8 C8A FON sing 154 n n N8 HN8 FON sing 155 n n C9 N10 FON sing 156 n n C9 H91 FON sing 157 n n C9 H92 FON sing 158 n n N10 C14 FON sing 159 n n N10 HN0 FON sing 160 n n C11 C12 FON doub 161 n y C11 C16 FON sing 162 n y C11 C FON sing 163 n n C12 C13 FON sing 164 n y C12 H12 FON sing 165 n n C13 C14 FON doub 166 n y C13 H13 FON sing 167 n n C14 C15 FON sing 168 n y C15 C16 FON doub 169 n y C15 H15 FON sing 170 n n C16 H16 FON sing 171 n n C O FON doub 172 n n C N FON sing 173 n n N CA FON sing 174 n n N HN FON sing 175 n n CA CB FON sing 176 n n CA CT FON sing 177 n n CA HA FON sing 178 n n CB CG FON sing 179 n n CB HB1 FON sing 180 n n CB HB2 FON sing 181 n n CG CD FON sing 182 n n CG HG1 FON sing 183 n n CG HG2 FON sing 184 n n CD OE1 FON doub 185 n n CD OE2 FON sing 186 n n OE2 HOE2 FON sing 187 n n CT O1 FON doub 188 n n CT O2 FON sing 189 n n O2 HO2 FON sing 190 n n CP1 O3 FON doub 191 n n CP1 HCP1 FON sing 192 n n # _atom_sites.entry_id 5ES7 _atom_sites.fract_transf_matrix[1][1] 0.006213 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FON A 1 701 586 FON FON . C 3 VAL A 1 702 587 VAL VLN . D 4 APC A 1 703 588 APC APC . E 5 HOH A 1 801 38 HOH HOH . E 5 HOH A 2 802 76 HOH HOH . E 5 HOH A 3 803 14 HOH HOH . E 5 HOH A 4 804 33 HOH HOH . E 5 HOH A 5 805 83 HOH HOH . E 5 HOH A 6 806 6 HOH HOH . E 5 HOH A 7 807 12 HOH HOH . E 5 HOH A 8 808 62 HOH HOH . E 5 HOH A 9 809 13 HOH HOH . E 5 HOH A 10 810 52 HOH HOH . E 5 HOH A 11 811 5 HOH HOH . E 5 HOH A 12 812 11 HOH HOH . E 5 HOH A 13 813 25 HOH HOH . E 5 HOH A 14 814 7 HOH HOH . E 5 HOH A 15 815 79 HOH HOH . E 5 HOH A 16 816 1 HOH HOH . E 5 HOH A 17 817 75 HOH HOH . E 5 HOH A 18 818 66 HOH HOH . E 5 HOH A 19 819 4 HOH HOH . E 5 HOH A 20 820 43 HOH HOH . E 5 HOH A 21 821 19 HOH HOH . E 5 HOH A 22 822 60 HOH HOH . E 5 HOH A 23 823 59 HOH HOH . E 5 HOH A 24 824 28 HOH HOH . E 5 HOH A 25 825 57 HOH HOH . E 5 HOH A 26 826 2 HOH HOH . E 5 HOH A 27 827 68 HOH HOH . E 5 HOH A 28 828 24 HOH HOH . E 5 HOH A 29 829 56 HOH HOH . E 5 HOH A 30 830 29 HOH HOH . E 5 HOH A 31 831 42 HOH HOH . E 5 HOH A 32 832 30 HOH HOH . E 5 HOH A 33 833 10 HOH HOH . E 5 HOH A 34 834 81 HOH HOH . E 5 HOH A 35 835 49 HOH HOH . E 5 HOH A 36 836 63 HOH HOH . E 5 HOH A 37 837 73 HOH HOH . E 5 HOH A 38 838 45 HOH HOH . E 5 HOH A 39 839 48 HOH HOH . E 5 HOH A 40 840 36 HOH HOH . E 5 HOH A 41 841 34 HOH HOH . E 5 HOH A 42 842 82 HOH HOH . E 5 HOH A 43 843 80 HOH HOH . E 5 HOH A 44 844 8 HOH HOH . E 5 HOH A 45 845 74 HOH HOH . E 5 HOH A 46 846 46 HOH HOH . E 5 HOH A 47 847 67 HOH HOH . E 5 HOH A 48 848 61 HOH HOH . E 5 HOH A 49 849 9 HOH HOH . E 5 HOH A 50 850 53 HOH HOH . E 5 HOH A 51 851 51 HOH HOH . E 5 HOH A 52 852 54 HOH HOH . E 5 HOH A 53 853 18 HOH HOH . E 5 HOH A 54 854 27 HOH HOH . E 5 HOH A 55 855 64 HOH HOH . E 5 HOH A 56 856 55 HOH HOH . E 5 HOH A 57 857 77 HOH HOH . E 5 HOH A 58 858 17 HOH HOH . E 5 HOH A 59 859 58 HOH HOH . E 5 HOH A 60 860 22 HOH HOH . E 5 HOH A 61 861 69 HOH HOH . E 5 HOH A 62 862 3 HOH HOH . E 5 HOH A 63 863 20 HOH HOH . E 5 HOH A 64 864 70 HOH HOH . E 5 HOH A 65 865 78 HOH HOH . E 5 HOH A 66 866 47 HOH HOH . E 5 HOH A 67 867 72 HOH HOH . E 5 HOH A 68 868 40 HOH HOH . E 5 HOH A 69 869 41 HOH HOH . E 5 HOH A 70 870 35 HOH HOH . E 5 HOH A 71 871 31 HOH HOH . E 5 HOH A 72 872 21 HOH HOH . E 5 HOH A 73 873 50 HOH HOH . E 5 HOH A 74 874 32 HOH HOH . E 5 HOH A 75 875 65 HOH HOH . E 5 HOH A 76 876 23 HOH HOH . E 5 HOH A 77 877 44 HOH HOH . E 5 HOH A 78 878 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FON . . . B 2 178.33 36.113 -0.158 1 89.74 ? N1 FON 701 A 1 HETATM 2 C C2 FON . . . B 2 179.525 36.65 -0.415 1 93.94 ? C2 FON 701 A 1 HETATM 3 N NA2 FON . . . B 2 179.878 37.037 -1.771 1 75.83 ? NA2 FON 701 A 1 HETATM 4 N N3 FON . . . B 2 180.435 36.873 0.539 1 98.08 ? N3 FON 701 A 1 HETATM 5 C C4 FON . . . B 2 180.196 36.554 1.807 1 95.61 ? C4 FON 701 A 1 HETATM 6 O O4 FON . . . B 2 181.021 36.756 2.63 1 106.77 ? O4 FON 701 A 1 HETATM 7 C C4A FON . . . B 2 178.95 35.981 2.117 1 93.62 ? C4A FON 701 A 1 HETATM 8 N N5 FON . . . B 2 178.582 35.592 3.469 1 99.03 ? N5 FON 701 A 1 HETATM 9 C C6 FON . . . B 2 177.631 34.556 3.613 1 101.26 ? C6 FON 701 A 1 HETATM 10 C C7 FON . . . B 2 176.383 34.838 2.802 1 101.75 ? C7 FON 701 A 1 HETATM 11 N N8 FON . . . B 2 176.645 35.127 1.389 1 88.65 ? N8 FON 701 A 1 HETATM 12 C C8A FON . . . B 2 178.013 35.767 1.089 1 90.5 ? C8A FON 701 A 1 HETATM 13 C C9 FON . . . B 2 178.293 33.208 3.136 1 106.01 ? C9 FON 701 A 1 HETATM 14 N N10 FON . . . B 2 177.401 32.078 3.338 1 107.67 ? N10 FON 701 A 1 HETATM 15 C C11 FON . . . B 2 178.249 28.487 1.292 1 125.95 ? C11 FON 701 A 1 HETATM 16 C C12 FON . . . B 2 178.11 29.668 0.583 1 111.81 ? C12 FON 701 A 1 HETATM 17 C C13 FON . . . B 2 177.83 30.847 1.254 1 114 ? C13 FON 701 A 1 HETATM 18 C C14 FON . . . B 2 177.685 30.839 2.632 1 109.41 ? C14 FON 701 A 1 HETATM 19 C C15 FON . . . B 2 177.823 29.658 3.337 1 117.05 ? C15 FON 701 A 1 HETATM 20 C C16 FON . . . B 2 178.105 28.479 2.669 1 123.55 ? C16 FON 701 A 1 HETATM 21 C C FON . . . B 2 178.555 27.177 0.563 1 119.23 ? C FON 701 A 1 HETATM 22 O O FON . . . B 2 177.787 26.748 -0.23 1 117.36 ? O FON 701 A 1 HETATM 23 N N FON . . . B 2 179.79 26.461 0.848 1 120.63 ? N FON 701 A 1 HETATM 24 C CA FON . . . B 2 180.075 25.211 0.161 1 124.78 ? CA FON 701 A 1 HETATM 25 C CB FON . . . B 2 181.208 25.408 -0.847 1 108.21 ? CB FON 701 A 1 HETATM 26 C CG FON . . . B 2 180.949 24.65 -2.153 1 105.64 ? CG FON 701 A 1 HETATM 27 C CD FON . . . B 2 180.771 25.586 -3.348 1 125.64 ? CD FON 701 A 1 HETATM 28 O OE1 FON . . . B 2 181.496 26.609 -3.463 1 129.39 -1 OE1 FON 701 A 1 HETATM 29 O OE2 FON . . . B 2 179.892 25.331 -4.214 1 145.02 ? OE2 FON 701 A 1 HETATM 30 C CT FON . . . B 2 180.466 24.145 1.186 1 113.94 ? CT FON 701 A 1 HETATM 31 O O1 FON . . . B 2 180.427 22.926 0.864 1 107.89 -1 O1 FON 701 A 1 HETATM 32 O O2 FON . . . B 2 180.814 24.473 2.353 1 113.85 ? O2 FON 701 A 1 HETATM 33 C CP1 FON . . . B 2 179.149 36.247 4.637 1 105.39 ? CP1 FON 701 A 1 HETATM 34 O O3 FON . . . B 2 178.823 35.904 5.725 1 111.27 ? O3 FON 701 A 1 HETATM 35 H HN1 FON . . . B 2 177.765 35.982 -0.803 1 107.69 ? HN1 FON 701 A 1 HETATM 36 H HN21 FON . . . B 2 179.288 36.982 -2.405 1 90.99 ? HN21 FON 701 A 1 HETATM 37 H HN22 FON . . . B 2 180.678 37.323 -1.946 1 90.99 ? HN22 FON 701 A 1 HETATM 38 H H61 FON . . . B 2 177.396 34.482 4.519 1 121.51 ? H61 FON 701 A 1 HETATM 39 H H7 FON . . . B 2 175.815 34.052 2.845 1 122.09 ? H7 FON 701 A 1 HETATM 40 H HC72 FON . . . B 2 175.944 35.612 3.188 1 122.09 ? HC72 FON 701 A 1 HETATM 41 H HN8 FON . . . B 2 175.998 35.646 1.067 1 106.38 ? HN8 FON 701 A 1 HETATM 42 H H91 FON . . . B 2 179.084 33.065 3.622 1 127.22 ? H91 FON 701 A 1 HETATM 43 H H92 FON . . . B 2 178.502 33.274 2.223 1 127.22 ? H92 FON 701 A 1 HETATM 44 H HN0 FON . . . B 2 176.716 32.142 3.867 1 129.21 ? HN0 FON 701 A 1 HETATM 45 H H12 FON . . . B 2 178.206 29.671 -0.341 1 134.18 ? H12 FON 701 A 1 HETATM 46 H H13 FON . . . B 2 177.74 31.641 0.781 1 136.81 ? H13 FON 701 A 1 HETATM 47 H H15 FON . . . B 2 177.73 29.656 4.262 1 140.46 ? H15 FON 701 A 1 HETATM 48 H H16 FON . . . B 2 178.196 27.685 3.143 1 148.27 ? H16 FON 701 A 1 HETATM 49 H HN FON . . . B 2 180.345 26.771 1.427 1 144.76 ? HN FON 701 A 1 HETATM 50 H HA FON . . . B 2 179.304 24.93 -0.296 1 149.73 ? HA FON 701 A 1 HETATM 51 H HB1 FON . . . B 2 181.295 26.354 -1.044 1 129.85 ? HB1 FON 701 A 1 HETATM 52 H HB2 FON . . . B 2 182.037 25.089 -0.457 1 129.85 ? HB2 FON 701 A 1 HETATM 53 H HG1 FON . . . B 2 180.146 24.115 -2.051 1 126.77 ? HG1 FON 701 A 1 HETATM 54 H HG2 FON . . . B 2 181.699 24.06 -2.327 1 126.77 ? HG2 FON 701 A 1 HETATM 55 H HCP1 FON . . . B 2 179.772 36.929 4.531 1 126.46 ? HCP1 FON 701 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 55 #