data_5ESB # _model_server_result.job_id tp-IxZ8a008pSEuZ-WutlA _model_server_result.datetime_utc '2024-11-05 16:20:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5esb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 5ESB # _exptl.entry_id 5ESB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ESB _cell.length_a 55.119 _cell.length_b 58.403 _cell.length_c 60.016 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ESB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 111 A CYS 1097 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 A SG CYS 113 A CYS 1099 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc3 A SG CYS 159 A CYS 1145 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc4 A ND1 HIS 163 A HIS 1149 1_555 B ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ESB _atom_sites.fract_transf_matrix[1][1] 0.018143 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017122 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1201 1 ZN ZN . C 3 SO4 A 1 1202 1 SO4 SO4 . D 3 SO4 A 1 1203 2 SO4 SO4 . E 4 SU3 A 1 1204 1 SU3 DRG . F 5 HOH A 1 1301 45 HOH HOH . F 5 HOH A 2 1302 38 HOH HOH . F 5 HOH A 3 1303 12 HOH HOH . F 5 HOH A 4 1304 53 HOH HOH . F 5 HOH A 5 1305 55 HOH HOH . F 5 HOH A 6 1306 23 HOH HOH . F 5 HOH A 7 1307 14 HOH HOH . F 5 HOH A 8 1308 16 HOH HOH . F 5 HOH A 9 1309 44 HOH HOH . F 5 HOH A 10 1310 1 HOH HOH . F 5 HOH A 11 1311 21 HOH HOH . F 5 HOH A 12 1312 32 HOH HOH . F 5 HOH A 13 1313 17 HOH HOH . F 5 HOH A 14 1314 13 HOH HOH . F 5 HOH A 15 1315 54 HOH HOH . F 5 HOH A 16 1316 68 HOH HOH . F 5 HOH A 17 1317 3 HOH HOH . F 5 HOH A 18 1318 18 HOH HOH . F 5 HOH A 19 1319 9 HOH HOH . F 5 HOH A 20 1320 8 HOH HOH . F 5 HOH A 21 1321 33 HOH HOH . F 5 HOH A 22 1322 19 HOH HOH . F 5 HOH A 23 1323 40 HOH HOH . F 5 HOH A 24 1324 64 HOH HOH . F 5 HOH A 25 1325 36 HOH HOH . F 5 HOH A 26 1326 63 HOH HOH . F 5 HOH A 27 1327 2 HOH HOH . F 5 HOH A 28 1328 67 HOH HOH . F 5 HOH A 29 1329 10 HOH HOH . F 5 HOH A 30 1330 39 HOH HOH . F 5 HOH A 31 1331 5 HOH HOH . F 5 HOH A 32 1332 6 HOH HOH . F 5 HOH A 33 1333 26 HOH HOH . F 5 HOH A 34 1334 7 HOH HOH . F 5 HOH A 35 1335 58 HOH HOH . F 5 HOH A 36 1336 43 HOH HOH . F 5 HOH A 37 1337 27 HOH HOH . F 5 HOH A 38 1338 50 HOH HOH . F 5 HOH A 39 1339 61 HOH HOH . F 5 HOH A 40 1340 4 HOH HOH . F 5 HOH A 41 1341 49 HOH HOH . F 5 HOH A 42 1342 20 HOH HOH . F 5 HOH A 43 1343 56 HOH HOH . F 5 HOH A 44 1344 31 HOH HOH . F 5 HOH A 45 1345 65 HOH HOH . F 5 HOH A 46 1346 29 HOH HOH . F 5 HOH A 47 1347 28 HOH HOH . F 5 HOH A 48 1348 35 HOH HOH . F 5 HOH A 49 1349 22 HOH HOH . F 5 HOH A 50 1350 70 HOH HOH . F 5 HOH A 51 1351 52 HOH HOH . F 5 HOH A 52 1352 42 HOH HOH . F 5 HOH A 53 1353 46 HOH HOH . F 5 HOH A 54 1354 30 HOH HOH . F 5 HOH A 55 1355 15 HOH HOH . F 5 HOH A 56 1356 34 HOH HOH . F 5 HOH A 57 1357 69 HOH HOH . F 5 HOH A 58 1358 37 HOH HOH . F 5 HOH A 59 1359 66 HOH HOH . F 5 HOH A 60 1360 57 HOH HOH . F 5 HOH A 61 1361 51 HOH HOH . F 5 HOH A 62 1362 62 HOH HOH . F 5 HOH A 63 1363 41 HOH HOH . F 5 HOH A 64 1364 11 HOH HOH . F 5 HOH A 65 1365 47 HOH HOH . F 5 HOH A 66 1366 59 HOH HOH . F 5 HOH A 67 1367 60 HOH HOH . F 5 HOH A 68 1368 25 HOH HOH . F 5 HOH A 69 1369 24 HOH HOH . F 5 HOH A 70 1370 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.454 _atom_site.Cartn_y -6.416 _atom_site.Cartn_z -39.174 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #