data_5ESF # _model_server_result.job_id lvAUAVuCUUwsHhhtOZytZw _model_server_result.datetime_utc '2024-11-26 19:56:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5esf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5ESF # _exptl.entry_id 5ESF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.271 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.39 _cell.angle_gamma 90 _cell.entry_id 5ESF _cell.length_a 78.49 _cell.length_b 66.93 _cell.length_c 81.06 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ESF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N5 TPF . A TPF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? # _chem_comp.formula 'C13 H12 F2 N6 O' _chem_comp.formula_weight 306.271 _chem_comp.id TPF _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FLUCONAZOLE;ALPHA-(2,4-DIFLUOROPHENYL)-ALPHA-(1H-1,2,4-TRIAZOLE-1-YLMETHYL)-1H-1,2,4-TRIAZOLE-1-ETHANOL;ELAZOR;TRIFLUCAN;BIOZOLENE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C1 TPF sing 388 n n O HO TPF sing 389 n n C1 C2 TPF sing 390 n n C1 C5 TPF sing 391 n n C1 C8 TPF sing 392 n n C2 N1 TPF sing 393 n n C2 HC21 TPF sing 394 n n C2 HC22 TPF sing 395 n n C5 N4 TPF sing 396 n n C5 HC51 TPF sing 397 n n C5 HC52 TPF sing 398 n n C8 C9 TPF doub 399 n y C8 C13 TPF sing 400 n y N1 C3 TPF sing 401 n y N1 N3 TPF sing 402 n y C3 N2 TPF doub 403 n y C3 HC3 TPF sing 404 n n N3 C4 TPF doub 405 n y N2 C4 TPF sing 406 n y C4 HC4 TPF sing 407 n n N4 C6 TPF sing 408 n y N4 N6 TPF sing 409 n y C6 N5 TPF doub 410 n y C6 HC6 TPF sing 411 n n N6 C7 TPF doub 412 n y N5 C7 TPF sing 413 n y C7 HC7 TPF sing 414 n n C9 C10 TPF sing 415 n y C9 HC9 TPF sing 416 n n C13 C12 TPF doub 417 n y C13 F2 TPF sing 418 n n C10 C11 TPF doub 419 n y C10 H10 TPF sing 420 n n C11 F1 TPF sing 421 n n C11 C12 TPF sing 422 n y C12 H12 TPF sing 423 n n # _atom_sites.entry_id 5ESF _atom_sites.fract_transf_matrix[1][1] 0.01274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002107 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 TPF A 1 602 1 TPF TPF . D 4 HOH A 1 701 14 HOH HOH . D 4 HOH A 2 702 13 HOH HOH . D 4 HOH A 3 703 33 HOH HOH . D 4 HOH A 4 704 48 HOH HOH . D 4 HOH A 5 705 78 HOH HOH . D 4 HOH A 6 706 50 HOH HOH . D 4 HOH A 7 707 43 HOH HOH . D 4 HOH A 8 708 106 HOH HOH . D 4 HOH A 9 709 64 HOH HOH . D 4 HOH A 10 710 29 HOH HOH . D 4 HOH A 11 711 54 HOH HOH . D 4 HOH A 12 712 90 HOH HOH . D 4 HOH A 13 713 47 HOH HOH . D 4 HOH A 14 714 27 HOH HOH . D 4 HOH A 15 715 17 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 5 HOH HOH . D 4 HOH A 18 718 76 HOH HOH . D 4 HOH A 19 719 7 HOH HOH . D 4 HOH A 20 720 57 HOH HOH . D 4 HOH A 21 721 12 HOH HOH . D 4 HOH A 22 722 19 HOH HOH . D 4 HOH A 23 723 10 HOH HOH . D 4 HOH A 24 724 9 HOH HOH . D 4 HOH A 25 725 81 HOH HOH . D 4 HOH A 26 726 75 HOH HOH . D 4 HOH A 27 727 66 HOH HOH . D 4 HOH A 28 728 40 HOH HOH . D 4 HOH A 29 729 42 HOH HOH . D 4 HOH A 30 730 38 HOH HOH . D 4 HOH A 31 731 91 HOH HOH . D 4 HOH A 32 732 24 HOH HOH . D 4 HOH A 33 733 69 HOH HOH . D 4 HOH A 34 734 51 HOH HOH . D 4 HOH A 35 735 62 HOH HOH . D 4 HOH A 36 736 55 HOH HOH . D 4 HOH A 37 737 1 HOH HOH . D 4 HOH A 38 738 31 HOH HOH . D 4 HOH A 39 739 3 HOH HOH . D 4 HOH A 40 740 71 HOH HOH . D 4 HOH A 41 741 52 HOH HOH . D 4 HOH A 42 742 4 HOH HOH . D 4 HOH A 43 743 21 HOH HOH . D 4 HOH A 44 744 18 HOH HOH . D 4 HOH A 45 745 2 HOH HOH . D 4 HOH A 46 746 58 HOH HOH . D 4 HOH A 47 747 68 HOH HOH . D 4 HOH A 48 748 23 HOH HOH . D 4 HOH A 49 749 15 HOH HOH . D 4 HOH A 50 750 70 HOH HOH . D 4 HOH A 51 751 53 HOH HOH . D 4 HOH A 52 752 49 HOH HOH . D 4 HOH A 53 753 67 HOH HOH . D 4 HOH A 54 754 20 HOH HOH . D 4 HOH A 55 755 34 HOH HOH . D 4 HOH A 56 756 85 HOH HOH . D 4 HOH A 57 757 25 HOH HOH . D 4 HOH A 58 758 8 HOH HOH . D 4 HOH A 59 759 22 HOH HOH . D 4 HOH A 60 760 6 HOH HOH . D 4 HOH A 61 761 77 HOH HOH . D 4 HOH A 62 762 107 HOH HOH . D 4 HOH A 63 763 11 HOH HOH . D 4 HOH A 64 764 30 HOH HOH . D 4 HOH A 65 765 61 HOH HOH . D 4 HOH A 66 766 104 HOH HOH . D 4 HOH A 67 767 60 HOH HOH . D 4 HOH A 68 768 79 HOH HOH . D 4 HOH A 69 769 26 HOH HOH . D 4 HOH A 70 770 95 HOH HOH . D 4 HOH A 71 771 46 HOH HOH . D 4 HOH A 72 772 37 HOH HOH . D 4 HOH A 73 773 28 HOH HOH . D 4 HOH A 74 774 87 HOH HOH . D 4 HOH A 75 775 88 HOH HOH . D 4 HOH A 76 776 59 HOH HOH . D 4 HOH A 77 777 84 HOH HOH . D 4 HOH A 78 778 36 HOH HOH . D 4 HOH A 79 779 72 HOH HOH . D 4 HOH A 80 780 86 HOH HOH . D 4 HOH A 81 781 93 HOH HOH . D 4 HOH A 82 782 97 HOH HOH . D 4 HOH A 83 783 45 HOH HOH . D 4 HOH A 84 784 98 HOH HOH . D 4 HOH A 85 785 32 HOH HOH . D 4 HOH A 86 786 80 HOH HOH . D 4 HOH A 87 787 35 HOH HOH . D 4 HOH A 88 788 63 HOH HOH . D 4 HOH A 89 789 82 HOH HOH . D 4 HOH A 90 790 56 HOH HOH . D 4 HOH A 91 791 44 HOH HOH . D 4 HOH A 92 792 65 HOH HOH . D 4 HOH A 93 793 39 HOH HOH . D 4 HOH A 94 794 41 HOH HOH . D 4 HOH A 95 795 101 HOH HOH . D 4 HOH A 96 796 103 HOH HOH . D 4 HOH A 97 797 74 HOH HOH . D 4 HOH A 98 798 92 HOH HOH . D 4 HOH A 99 799 99 HOH HOH . D 4 HOH A 100 800 83 HOH HOH . D 4 HOH A 101 801 105 HOH HOH . D 4 HOH A 102 802 102 HOH HOH . D 4 HOH A 103 803 100 HOH HOH . D 4 HOH A 104 804 73 HOH HOH . D 4 HOH A 105 805 89 HOH HOH . D 4 HOH A 106 806 94 HOH HOH . D 4 HOH A 107 807 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O TPF . . . C 3 23.144 9.623 17.141 1 36.8 ? O TPF 602 A 1 HETATM 2 C C1 TPF . . . C 3 22.79 10.67 16.235 1 36.05 ? C1 TPF 602 A 1 HETATM 3 C C2 TPF . . . C 3 21.365 10.376 15.724 1 36.6 ? C2 TPF 602 A 1 HETATM 4 C C5 TPF . . . C 3 22.889 11.995 17.021 1 36.81 ? C5 TPF 602 A 1 HETATM 5 C C8 TPF . . . C 3 23.797 10.723 15.079 1 36.07 ? C8 TPF 602 A 1 HETATM 6 N N1 TPF . . . C 3 20.361 10.436 16.78 1 34.1 ? N1 TPF 602 A 1 HETATM 7 C C3 TPF . . . C 3 19.942 9.478 17.595 1 37.91 ? C3 TPF 602 A 1 HETATM 8 N N3 TPF . . . C 3 19.653 11.569 17.005 1 40.07 ? N3 TPF 602 A 1 HETATM 9 N N2 TPF . . . C 3 18.966 9.908 18.362 1 37.99 ? N2 TPF 602 A 1 HETATM 10 C C4 TPF . . . C 3 18.833 11.188 17.959 1 39.27 ? C4 TPF 602 A 1 HETATM 11 N N4 TPF . . . C 3 24.245 12.286 17.439 1 35.23 ? N4 TPF 602 A 1 HETATM 12 C C6 TPF . . . C 3 25.024 11.632 18.293 1 37.11 ? C6 TPF 602 A 1 HETATM 13 N N6 TPF . . . C 3 24.94 13.326 16.908 1 33.22 ? N6 TPF 602 A 1 HETATM 14 N N5 TPF . . . C 3 26.214 12.177 18.359 1 33.16 ? N5 TPF 602 A 1 HETATM 15 C C7 TPF . . . C 3 26.107 13.207 17.493 1 31.11 ? C7 TPF 602 A 1 HETATM 16 C C9 TPF . . . C 3 24.852 9.822 15.026 1 37.36 ? C9 TPF 602 A 1 HETATM 17 C C13 TPF . . . C 3 23.744 11.677 14.076 1 35.51 ? C13 TPF 602 A 1 HETATM 18 C C10 TPF . . . C 3 25.809 9.886 14.029 1 39.9 ? C10 TPF 602 A 1 HETATM 19 C C11 TPF . . . C 3 25.694 10.87 13.086 1 38.77 ? C11 TPF 602 A 1 HETATM 20 F F1 TPF . . . C 3 26.648 10.966 12.124 1 34.65 ? F1 TPF 602 A 1 HETATM 21 C C12 TPF . . . C 3 24.673 11.781 13.073 1 36.25 ? C12 TPF 602 A 1 HETATM 22 F F2 TPF . . . C 3 22.718 12.555 14.076 1 37.73 ? F2 TPF 602 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 1290 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 22 #