data_5ESJ # _model_server_result.job_id lrbS5W-QjRSgrB4G_n9qVw _model_server_result.datetime_utc '2024-11-25 12:55:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5esj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5ESJ # _exptl.entry_id 5ESJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.271 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.24 _cell.angle_gamma 90 _cell.entry_id 5ESJ _cell.length_a 78.14 _cell.length_b 67.1 _cell.length_c 80.82 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ESJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N5 TPF . A TPF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? # _chem_comp.formula 'C13 H12 F2 N6 O' _chem_comp.formula_weight 306.271 _chem_comp.id TPF _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FLUCONAZOLE;ALPHA-(2,4-DIFLUOROPHENYL)-ALPHA-(1H-1,2,4-TRIAZOLE-1-YLMETHYL)-1H-1,2,4-TRIAZOLE-1-ETHANOL;ELAZOR;TRIFLUCAN;BIOZOLENE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C1 TPF sing 388 n n O HO TPF sing 389 n n C1 C2 TPF sing 390 n n C1 C5 TPF sing 391 n n C1 C8 TPF sing 392 n n C2 N1 TPF sing 393 n n C2 HC21 TPF sing 394 n n C2 HC22 TPF sing 395 n n C5 N4 TPF sing 396 n n C5 HC51 TPF sing 397 n n C5 HC52 TPF sing 398 n n C8 C9 TPF doub 399 n y C8 C13 TPF sing 400 n y N1 C3 TPF sing 401 n y N1 N3 TPF sing 402 n y C3 N2 TPF doub 403 n y C3 HC3 TPF sing 404 n n N3 C4 TPF doub 405 n y N2 C4 TPF sing 406 n y C4 HC4 TPF sing 407 n n N4 C6 TPF sing 408 n y N4 N6 TPF sing 409 n y C6 N5 TPF doub 410 n y C6 HC6 TPF sing 411 n n N6 C7 TPF doub 412 n y N5 C7 TPF sing 413 n y C7 HC7 TPF sing 414 n n C9 C10 TPF sing 415 n y C9 HC9 TPF sing 416 n n C13 C12 TPF doub 417 n y C13 F2 TPF sing 418 n n C10 C11 TPF doub 419 n y C10 H10 TPF sing 420 n n C11 F1 TPF sing 421 n n C11 C12 TPF sing 422 n y C12 H12 TPF sing 423 n n # _atom_sites.entry_id 5ESJ _atom_sites.fract_transf_matrix[1][1] 0.012798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002082 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012536 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 TPF A 1 602 1 TPF TPF . D 4 HOH A 1 701 164 HOH HOH . D 4 HOH A 2 702 134 HOH HOH . D 4 HOH A 3 703 25 HOH HOH . D 4 HOH A 4 704 66 HOH HOH . D 4 HOH A 5 705 36 HOH HOH . D 4 HOH A 6 706 71 HOH HOH . D 4 HOH A 7 707 122 HOH HOH . D 4 HOH A 8 708 2 HOH HOH . D 4 HOH A 9 709 77 HOH HOH . D 4 HOH A 10 710 162 HOH HOH . D 4 HOH A 11 711 43 HOH HOH . D 4 HOH A 12 712 65 HOH HOH . D 4 HOH A 13 713 82 HOH HOH . D 4 HOH A 14 714 169 HOH HOH . D 4 HOH A 15 715 166 HOH HOH . D 4 HOH A 16 716 151 HOH HOH . D 4 HOH A 17 717 94 HOH HOH . D 4 HOH A 18 718 42 HOH HOH . D 4 HOH A 19 719 125 HOH HOH . D 4 HOH A 20 720 17 HOH HOH . D 4 HOH A 21 721 159 HOH HOH . D 4 HOH A 22 722 101 HOH HOH . D 4 HOH A 23 723 33 HOH HOH . D 4 HOH A 24 724 41 HOH HOH . D 4 HOH A 25 725 7 HOH HOH . D 4 HOH A 26 726 56 HOH HOH . D 4 HOH A 27 727 100 HOH HOH . D 4 HOH A 28 728 5 HOH HOH . D 4 HOH A 29 729 13 HOH HOH . D 4 HOH A 30 730 142 HOH HOH . D 4 HOH A 31 731 60 HOH HOH . D 4 HOH A 32 732 46 HOH HOH . D 4 HOH A 33 733 70 HOH HOH . D 4 HOH A 34 734 29 HOH HOH . D 4 HOH A 35 735 24 HOH HOH . D 4 HOH A 36 736 110 HOH HOH . D 4 HOH A 37 737 163 HOH HOH . D 4 HOH A 38 738 90 HOH HOH . D 4 HOH A 39 739 138 HOH HOH . D 4 HOH A 40 740 95 HOH HOH . D 4 HOH A 41 741 74 HOH HOH . D 4 HOH A 42 742 79 HOH HOH . D 4 HOH A 43 743 81 HOH HOH . D 4 HOH A 44 744 57 HOH HOH . D 4 HOH A 45 745 59 HOH HOH . D 4 HOH A 46 746 48 HOH HOH . D 4 HOH A 47 747 22 HOH HOH . D 4 HOH A 48 748 18 HOH HOH . D 4 HOH A 49 749 107 HOH HOH . D 4 HOH A 50 750 87 HOH HOH . D 4 HOH A 51 751 40 HOH HOH . D 4 HOH A 52 752 10 HOH HOH . D 4 HOH A 53 753 45 HOH HOH . D 4 HOH A 54 754 35 HOH HOH . D 4 HOH A 55 755 113 HOH HOH . D 4 HOH A 56 756 14 HOH HOH . D 4 HOH A 57 757 11 HOH HOH . D 4 HOH A 58 758 6 HOH HOH . D 4 HOH A 59 759 76 HOH HOH . D 4 HOH A 60 760 27 HOH HOH . D 4 HOH A 61 761 9 HOH HOH . D 4 HOH A 62 762 92 HOH HOH . D 4 HOH A 63 763 156 HOH HOH . D 4 HOH A 64 764 108 HOH HOH . D 4 HOH A 65 765 111 HOH HOH . D 4 HOH A 66 766 144 HOH HOH . D 4 HOH A 67 767 118 HOH HOH . D 4 HOH A 68 768 93 HOH HOH . D 4 HOH A 69 769 119 HOH HOH . D 4 HOH A 70 770 3 HOH HOH . D 4 HOH A 71 771 153 HOH HOH . D 4 HOH A 72 772 20 HOH HOH . D 4 HOH A 73 773 23 HOH HOH . D 4 HOH A 74 774 19 HOH HOH . D 4 HOH A 75 775 64 HOH HOH . D 4 HOH A 76 776 80 HOH HOH . D 4 HOH A 77 777 131 HOH HOH . D 4 HOH A 78 778 67 HOH HOH . D 4 HOH A 79 779 112 HOH HOH . D 4 HOH A 80 780 152 HOH HOH . D 4 HOH A 81 781 52 HOH HOH . D 4 HOH A 82 782 21 HOH HOH . D 4 HOH A 83 783 1 HOH HOH . D 4 HOH A 84 784 37 HOH HOH . D 4 HOH A 85 785 84 HOH HOH . D 4 HOH A 86 786 91 HOH HOH . D 4 HOH A 87 787 160 HOH HOH . D 4 HOH A 88 788 88 HOH HOH . D 4 HOH A 89 789 121 HOH HOH . D 4 HOH A 90 790 155 HOH HOH . D 4 HOH A 91 791 62 HOH HOH . D 4 HOH A 92 792 139 HOH HOH . D 4 HOH A 93 793 165 HOH HOH . D 4 HOH A 94 794 12 HOH HOH . D 4 HOH A 95 795 16 HOH HOH . D 4 HOH A 96 796 63 HOH HOH . D 4 HOH A 97 797 103 HOH HOH . D 4 HOH A 98 798 127 HOH HOH . D 4 HOH A 99 799 53 HOH HOH . D 4 HOH A 100 800 98 HOH HOH . D 4 HOH A 101 801 141 HOH HOH . D 4 HOH A 102 802 47 HOH HOH . D 4 HOH A 103 803 26 HOH HOH . D 4 HOH A 104 804 4 HOH HOH . D 4 HOH A 105 805 30 HOH HOH . D 4 HOH A 106 806 15 HOH HOH . D 4 HOH A 107 807 32 HOH HOH . D 4 HOH A 108 808 106 HOH HOH . D 4 HOH A 109 809 116 HOH HOH . D 4 HOH A 110 810 124 HOH HOH . D 4 HOH A 111 811 105 HOH HOH . D 4 HOH A 112 812 38 HOH HOH . D 4 HOH A 113 813 34 HOH HOH . D 4 HOH A 114 814 128 HOH HOH . D 4 HOH A 115 815 102 HOH HOH . D 4 HOH A 116 816 75 HOH HOH . D 4 HOH A 117 817 137 HOH HOH . D 4 HOH A 118 818 96 HOH HOH . D 4 HOH A 119 819 86 HOH HOH . D 4 HOH A 120 820 44 HOH HOH . D 4 HOH A 121 821 58 HOH HOH . D 4 HOH A 122 822 133 HOH HOH . D 4 HOH A 123 823 129 HOH HOH . D 4 HOH A 124 824 68 HOH HOH . D 4 HOH A 125 825 8 HOH HOH . D 4 HOH A 126 826 39 HOH HOH . D 4 HOH A 127 827 78 HOH HOH . D 4 HOH A 128 828 49 HOH HOH . D 4 HOH A 129 829 28 HOH HOH . D 4 HOH A 130 830 161 HOH HOH . D 4 HOH A 131 831 72 HOH HOH . D 4 HOH A 132 832 104 HOH HOH . D 4 HOH A 133 833 168 HOH HOH . D 4 HOH A 134 834 157 HOH HOH . D 4 HOH A 135 835 55 HOH HOH . D 4 HOH A 136 836 132 HOH HOH . D 4 HOH A 137 837 97 HOH HOH . D 4 HOH A 138 838 126 HOH HOH . D 4 HOH A 139 839 50 HOH HOH . D 4 HOH A 140 840 51 HOH HOH . D 4 HOH A 141 841 69 HOH HOH . D 4 HOH A 142 842 154 HOH HOH . D 4 HOH A 143 843 114 HOH HOH . D 4 HOH A 144 844 140 HOH HOH . D 4 HOH A 145 845 83 HOH HOH . D 4 HOH A 146 846 167 HOH HOH . D 4 HOH A 147 847 99 HOH HOH . D 4 HOH A 148 848 61 HOH HOH . D 4 HOH A 149 849 171 HOH HOH . D 4 HOH A 150 850 143 HOH HOH . D 4 HOH A 151 851 115 HOH HOH . D 4 HOH A 152 852 54 HOH HOH . D 4 HOH A 153 853 109 HOH HOH . D 4 HOH A 154 854 89 HOH HOH . D 4 HOH A 155 855 149 HOH HOH . D 4 HOH A 156 856 73 HOH HOH . D 4 HOH A 157 857 31 HOH HOH . D 4 HOH A 158 858 145 HOH HOH . D 4 HOH A 159 859 130 HOH HOH . D 4 HOH A 160 860 123 HOH HOH . D 4 HOH A 161 861 172 HOH HOH . D 4 HOH A 162 862 85 HOH HOH . D 4 HOH A 163 863 135 HOH HOH . D 4 HOH A 164 864 170 HOH HOH . D 4 HOH A 165 865 173 HOH HOH . D 4 HOH A 166 866 146 HOH HOH . D 4 HOH A 167 867 120 HOH HOH . D 4 HOH A 168 868 150 HOH HOH . D 4 HOH A 169 869 136 HOH HOH . D 4 HOH A 170 870 148 HOH HOH . D 4 HOH A 171 871 147 HOH HOH . D 4 HOH A 172 872 158 HOH HOH . D 4 HOH A 173 873 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O TPF . . . C 3 23.206 9.827 17.019 1 31.88 ? O TPF 602 A 1 HETATM 2 C C1 TPF . . . C 3 22.887 10.871 16.096 1 31.41 ? C1 TPF 602 A 1 HETATM 3 C C2 TPF . . . C 3 21.468 10.587 15.559 1 29.39 ? C2 TPF 602 A 1 HETATM 4 C C5 TPF . . . C 3 22.965 12.196 16.881 1 27.7 ? C5 TPF 602 A 1 HETATM 5 C C8 TPF . . . C 3 23.932 10.914 14.98 1 27.75 ? C8 TPF 602 A 1 HETATM 6 N N1 TPF . . . C 3 20.449 10.635 16.596 1 27.4 ? N1 TPF 602 A 1 HETATM 7 C C3 TPF . . . C 3 19.99 9.66 17.372 1 29.26 ? C3 TPF 602 A 1 HETATM 8 N N3 TPF . . . C 3 19.774 11.781 16.865 1 31.94 ? N3 TPF 602 A 1 HETATM 9 N N2 TPF . . . C 3 19.027 10.093 18.154 1 33.1 ? N2 TPF 602 A 1 HETATM 10 C C4 TPF . . . C 3 18.939 11.392 17.801 1 32.68 ? C4 TPF 602 A 1 HETATM 11 N N4 TPF . . . C 3 24.31 12.466 17.371 1 32 ? N4 TPF 602 A 1 HETATM 12 C C6 TPF . . . C 3 24.993 11.852 18.328 1 27.59 ? C6 TPF 602 A 1 HETATM 13 N N6 TPF . . . C 3 25.088 13.414 16.795 1 27.75 ? N6 TPF 602 A 1 HETATM 14 N N5 TPF . . . C 3 26.209 12.336 18.42 1 27.51 ? N5 TPF 602 A 1 HETATM 15 C C7 TPF . . . C 3 26.21 13.287 17.463 1 25.28 ? C7 TPF 602 A 1 HETATM 16 C C9 TPF . . . C 3 25.014 10.043 14.993 1 27.4 ? C9 TPF 602 A 1 HETATM 17 C C13 TPF . . . C 3 23.892 11.832 13.94 1 27.36 ? C13 TPF 602 A 1 HETATM 18 C C10 TPF . . . C 3 26.002 10.097 14.026 1 29.66 ? C10 TPF 602 A 1 HETATM 19 C C11 TPF . . . C 3 25.892 11.036 13.04 1 30.81 ? C11 TPF 602 A 1 HETATM 20 F F1 TPF . . . C 3 26.862 11.101 12.091 1 30.22 ? F1 TPF 602 A 1 HETATM 21 C C12 TPF . . . C 3 24.85 11.921 12.963 1 28.32 ? C12 TPF 602 A 1 HETATM 22 F F2 TPF . . . C 3 22.852 12.689 13.881 1 30.8 ? F2 TPF 602 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #