data_5ESL
#
_model_server_result.job_id            e7hSThCaB4gFv8HPkV5Nbw 
_model_server_result.datetime_utc      '2024-11-26 15:33:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5esl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":702}' 
#
_entry.id    5ESL 
#
_exptl.entry_id    5ESL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               T322I 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     1.14.13.70 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.42 
_cell.angle_gamma         90 
_cell.entry_id            5ESL 
_cell.length_a            77.09 
_cell.length_b            65.39 
_cell.length_c            80.78 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ESL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 C FE HEM . A HEM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc2 B N39 1YN . A 1YN 701 1_555 C FE HEM . A HEM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 222 n n 
CHA C4D HEM doub 223 n n 
CHA HHA HEM sing 224 n n 
CHB C4A HEM sing 225 n n 
CHB C1B HEM doub 226 n n 
CHB HHB HEM sing 227 n n 
CHC C4B HEM sing 228 n n 
CHC C1C HEM doub 229 n n 
CHC HHC HEM sing 230 n n 
CHD C4C HEM doub 231 n n 
CHD C1D HEM sing 232 n n 
CHD HHD HEM sing 233 n n 
C1A C2A HEM doub 234 n y 
C1A NA HEM sing 235 n y 
C2A C3A HEM sing 236 n y 
C2A CAA HEM sing 237 n n 
C3A C4A HEM doub 238 n y 
C3A CMA HEM sing 239 n n 
C4A NA HEM sing 240 n y 
CMA HMA HEM sing 241 n n 
CMA HMAA HEM sing 242 n n 
CMA HMAB HEM sing 243 n n 
CAA CBA HEM sing 244 n n 
CAA HAA HEM sing 245 n n 
CAA HAAA HEM sing 246 n n 
CBA CGA HEM sing 247 n n 
CBA HBA HEM sing 248 n n 
CBA HBAA HEM sing 249 n n 
CGA O1A HEM doub 250 n n 
CGA O2A HEM sing 251 n n 
C1B C2B HEM sing 252 n n 
C1B NB HEM sing 253 n n 
C2B C3B HEM doub 254 n n 
C2B CMB HEM sing 255 n n 
C3B C4B HEM sing 256 n n 
C3B CAB HEM sing 257 n n 
C4B NB HEM doub 258 n n 
CMB HMB HEM sing 259 n n 
CMB HMBA HEM sing 260 n n 
CMB HMBB HEM sing 261 n n 
CAB CBB HEM doub 262 n n 
CAB HAB HEM sing 263 n n 
CBB HBB HEM sing 264 n n 
CBB HBBA HEM sing 265 n n 
C1C C2C HEM sing 266 n y 
C1C NC HEM sing 267 n y 
C2C C3C HEM doub 268 n y 
C2C CMC HEM sing 269 n n 
C3C C4C HEM sing 270 n y 
C3C CAC HEM sing 271 n n 
C4C NC HEM sing 272 n y 
CMC HMC HEM sing 273 n n 
CMC HMCA HEM sing 274 n n 
CMC HMCB HEM sing 275 n n 
CAC CBC HEM doub 276 n n 
CAC HAC HEM sing 277 n n 
CBC HBC HEM sing 278 n n 
CBC HBCA HEM sing 279 n n 
C1D C2D HEM sing 280 n n 
C1D ND HEM doub 281 n n 
C2D C3D HEM doub 282 n n 
C2D CMD HEM sing 283 n n 
C3D C4D HEM sing 284 n n 
C3D CAD HEM sing 285 n n 
C4D ND HEM sing 286 n n 
CMD HMD HEM sing 287 n n 
CMD HMDA HEM sing 288 n n 
CMD HMDB HEM sing 289 n n 
CAD CBD HEM sing 290 n n 
CAD HAD HEM sing 291 n n 
CAD HADA HEM sing 292 n n 
CBD CGD HEM sing 293 n n 
CBD HBD HEM sing 294 n n 
CBD HBDA HEM sing 295 n n 
CGD O1D HEM doub 296 n n 
CGD O2D HEM sing 297 n n 
O2A H2A HEM sing 298 n n 
O2D H2D HEM sing 299 n n 
FE NA HEM sing 300 n n 
FE NB HEM sing 301 n n 
FE NC HEM sing 302 n n 
FE ND HEM sing 303 n n 
#
_atom_sites.entry_id                     5ESL 
_atom_sites.fract_transf_matrix[1][1]    0.012972 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00192 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015293 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012514 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1YN A 1 701 701 1YN 1YN . 
C 3 HEM A 1 702 601 HEM HEM . 
D 4 HOH A 1 801 1 HOH HOH . 
D 4 HOH A 2 802 55 HOH HOH . 
D 4 HOH A 3 803 58 HOH HOH . 
D 4 HOH A 4 804 89 HOH HOH . 
D 4 HOH A 5 805 87 HOH HOH . 
D 4 HOH A 6 806 2 HOH HOH . 
D 4 HOH A 7 807 4 HOH HOH . 
D 4 HOH A 8 808 20 HOH HOH . 
D 4 HOH A 9 809 101 HOH HOH . 
D 4 HOH A 10 810 3 HOH HOH . 
D 4 HOH A 11 811 46 HOH HOH . 
D 4 HOH A 12 812 69 HOH HOH . 
D 4 HOH A 13 813 39 HOH HOH . 
D 4 HOH A 14 814 30 HOH HOH . 
D 4 HOH A 15 815 70 HOH HOH . 
D 4 HOH A 16 816 34 HOH HOH . 
D 4 HOH A 17 817 14 HOH HOH . 
D 4 HOH A 18 818 74 HOH HOH . 
D 4 HOH A 19 819 18 HOH HOH . 
D 4 HOH A 20 820 6 HOH HOH . 
D 4 HOH A 21 821 24 HOH HOH . 
D 4 HOH A 22 822 27 HOH HOH . 
D 4 HOH A 23 823 52 HOH HOH . 
D 4 HOH A 24 824 38 HOH HOH . 
D 4 HOH A 25 825 25 HOH HOH . 
D 4 HOH A 26 826 8 HOH HOH . 
D 4 HOH A 27 827 35 HOH HOH . 
D 4 HOH A 28 828 40 HOH HOH . 
D 4 HOH A 29 829 7 HOH HOH . 
D 4 HOH A 30 830 71 HOH HOH . 
D 4 HOH A 31 831 23 HOH HOH . 
D 4 HOH A 32 832 54 HOH HOH . 
D 4 HOH A 33 833 51 HOH HOH . 
D 4 HOH A 34 834 41 HOH HOH . 
D 4 HOH A 35 835 19 HOH HOH . 
D 4 HOH A 36 836 29 HOH HOH . 
D 4 HOH A 37 837 93 HOH HOH . 
D 4 HOH A 38 838 50 HOH HOH . 
D 4 HOH A 39 839 65 HOH HOH . 
D 4 HOH A 40 840 28 HOH HOH . 
D 4 HOH A 41 841 11 HOH HOH . 
D 4 HOH A 42 842 81 HOH HOH . 
D 4 HOH A 43 843 9 HOH HOH . 
D 4 HOH A 44 844 12 HOH HOH . 
D 4 HOH A 45 845 47 HOH HOH . 
D 4 HOH A 46 846 13 HOH HOH . 
D 4 HOH A 47 847 10 HOH HOH . 
D 4 HOH A 48 848 36 HOH HOH . 
D 4 HOH A 49 849 17 HOH HOH . 
D 4 HOH A 50 850 73 HOH HOH . 
D 4 HOH A 51 851 42 HOH HOH . 
D 4 HOH A 52 852 60 HOH HOH . 
D 4 HOH A 53 853 64 HOH HOH . 
D 4 HOH A 54 854 44 HOH HOH . 
D 4 HOH A 55 855 79 HOH HOH . 
D 4 HOH A 56 856 75 HOH HOH . 
D 4 HOH A 57 857 62 HOH HOH . 
D 4 HOH A 58 858 32 HOH HOH . 
D 4 HOH A 59 859 63 HOH HOH . 
D 4 HOH A 60 860 45 HOH HOH . 
D 4 HOH A 61 861 83 HOH HOH . 
D 4 HOH A 62 862 78 HOH HOH . 
D 4 HOH A 63 863 88 HOH HOH . 
D 4 HOH A 64 864 26 HOH HOH . 
D 4 HOH A 65 865 16 HOH HOH . 
D 4 HOH A 66 866 53 HOH HOH . 
D 4 HOH A 67 867 76 HOH HOH . 
D 4 HOH A 68 868 37 HOH HOH . 
D 4 HOH A 69 869 96 HOH HOH . 
D 4 HOH A 70 870 82 HOH HOH . 
D 4 HOH A 71 871 57 HOH HOH . 
D 4 HOH A 72 872 92 HOH HOH . 
D 4 HOH A 73 873 21 HOH HOH . 
D 4 HOH A 74 874 90 HOH HOH . 
D 4 HOH A 75 875 66 HOH HOH . 
D 4 HOH A 76 876 59 HOH HOH . 
D 4 HOH A 77 877 94 HOH HOH . 
D 4 HOH A 78 878 48 HOH HOH . 
D 4 HOH A 79 879 5 HOH HOH . 
D 4 HOH A 80 880 43 HOH HOH . 
D 4 HOH A 81 881 49 HOH HOH . 
D 4 HOH A 82 882 22 HOH HOH . 
D 4 HOH A 83 883 33 HOH HOH . 
D 4 HOH A 84 884 67 HOH HOH . 
D 4 HOH A 85 885 84 HOH HOH . 
D 4 HOH A 86 886 31 HOH HOH . 
D 4 HOH A 87 887 86 HOH HOH . 
D 4 HOH A 88 888 85 HOH HOH . 
D 4 HOH A 89 889 102 HOH HOH . 
D 4 HOH A 90 890 91 HOH HOH . 
D 4 HOH A 91 891 56 HOH HOH . 
D 4 HOH A 92 892 15 HOH HOH . 
D 4 HOH A 93 893 98 HOH HOH . 
D 4 HOH A 94 894 99 HOH HOH . 
D 4 HOH A 95 895 95 HOH HOH . 
D 4 HOH A 96 896 61 HOH HOH . 
D 4 HOH A 97 897 100 HOH HOH . 
D 4 HOH A 98 898 80 HOH HOH . 
D 4 HOH A 99 899 77 HOH HOH . 
D 4 HOH A 100 900 72 HOH HOH . 
D 4 HOH A 101 901 68 HOH HOH . 
D 4 HOH A 102 902 97 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 103.369 7.497 18.321 1 32.25 ? CHA HEM 702 A 1 
HETATM 2 C CHB HEM . . . C 3 102.908 10.6 22.063 1 28.69 ? CHB HEM 702 A 1 
HETATM 3 C CHC HEM . . . C 3 105.432 13.953 19.706 1 33.61 ? CHC HEM 702 A 1 
HETATM 4 C CHD HEM . . . C 3 105.95 10.892 16.009 1 29.62 ? CHD HEM 702 A 1 
HETATM 5 C C1A HEM . . . C 3 103.035 8.059 19.524 1 32.18 ? C1A HEM 702 A 1 
HETATM 6 C C2A HEM . . . C 3 102.251 7.414 20.534 1 31.43 ? C2A HEM 702 A 1 
HETATM 7 C C3A HEM . . . C 3 102.124 8.266 21.568 1 32.39 ? C3A HEM 702 A 1 
HETATM 8 C C4A HEM . . . C 3 102.82 9.486 21.248 1 30.47 ? C4A HEM 702 A 1 
HETATM 9 C CMA HEM . . . C 3 101.358 8.01 22.89 1 30.56 ? CMA HEM 702 A 1 
HETATM 10 C CAA HEM . . . C 3 101.692 5.978 20.413 1 28.38 ? CAA HEM 702 A 1 
HETATM 11 C CBA HEM . . . C 3 100.327 6.012 19.77 1 28.48 ? CBA HEM 702 A 1 
HETATM 12 C CGA HEM . . . C 3 99.67 4.67 19.872 1 29.49 ? CGA HEM 702 A 1 
HETATM 13 O O1A HEM . . . C 3 98.498 4.545 19.424 1 35.07 ? O1A HEM 702 A 1 
HETATM 14 O O2A HEM . . . C 3 100.3 3.722 20.41 1 35.15 ? O2A HEM 702 A 1 
HETATM 15 C C1B HEM . . . C 3 103.575 11.772 21.795 1 30.24 ? C1B HEM 702 A 1 
HETATM 16 C C2B HEM . . . C 3 103.809 12.913 22.682 1 31.65 ? C2B HEM 702 A 1 
HETATM 17 C C3B HEM . . . C 3 104.502 13.839 21.988 1 28.64 ? C3B HEM 702 A 1 
HETATM 18 C C4B HEM . . . C 3 104.741 13.3 20.683 1 29.55 ? C4B HEM 702 A 1 
HETATM 19 C CMB HEM . . . C 3 103.321 12.992 24.145 1 32.77 ? CMB HEM 702 A 1 
HETATM 20 C CAB HEM . . . C 3 105.083 15.238 22.336 1 34.33 ? CAB HEM 702 A 1 
HETATM 21 C CBB HEM . . . C 3 105.06 15.84 23.523 1 32.01 ? CBB HEM 702 A 1 
HETATM 22 C C1C HEM . . . C 3 105.855 13.368 18.545 1 33.16 ? C1C HEM 702 A 1 
HETATM 23 C C2C HEM . . . C 3 106.849 13.937 17.674 1 31.15 ? C2C HEM 702 A 1 
HETATM 24 C C3C HEM . . . C 3 106.988 13.096 16.631 1 31.73 ? C3C HEM 702 A 1 
HETATM 25 C C4C HEM . . . C 3 106.102 11.963 16.85 1 27.69 ? C4C HEM 702 A 1 
HETATM 26 C CMC HEM . . . C 3 107.521 15.298 17.968 1 32.29 ? CMC HEM 702 A 1 
HETATM 27 C CAC HEM . . . C 3 107.929 13.222 15.407 1 36.79 ? CAC HEM 702 A 1 
HETATM 28 C CBC HEM . . . C 3 108.914 14.128 15.362 1 35.5 ? CBC HEM 702 A 1 
HETATM 29 C C1D HEM . . . C 3 105.353 9.696 16.292 1 25.17 ? C1D HEM 702 A 1 
HETATM 30 C C2D HEM . . . C 3 105.447 8.534 15.44 1 31.02 ? C2D HEM 702 A 1 
HETATM 31 C C3D HEM . . . C 3 104.635 7.46 16.163 1 32.15 ? C3D HEM 702 A 1 
HETATM 32 C C4D HEM . . . C 3 104.146 8.101 17.372 1 30.71 ? C4D HEM 702 A 1 
HETATM 33 C CMD HEM . . . C 3 106.199 8.42 14.09 1 22.75 ? CMD HEM 702 A 1 
HETATM 34 C CAD HEM . . . C 3 104.416 5.998 15.727 1 27.6 ? CAD HEM 702 A 1 
HETATM 35 C CBD HEM . . . C 3 102.978 5.704 15.363 1 33.77 ? CBD HEM 702 A 1 
HETATM 36 C CGD HEM . . . C 3 102.847 4.216 15.261 1 33.29 ? CGD HEM 702 A 1 
HETATM 37 O O1D HEM . . . C 3 103.884 3.511 15.355 1 31.03 ? O1D HEM 702 A 1 
HETATM 38 O O2D HEM . . . C 3 101.699 3.749 15.097 1 36.4 ? O2D HEM 702 A 1 
HETATM 39 N NA HEM . . . C 3 103.362 9.319 19.975 1 31.09 ? NA HEM 702 A 1 
HETATM 40 N NB HEM . . . C 3 104.16 12.058 20.574 1 29.67 ? NB HEM 702 A 1 
HETATM 41 N NC HEM . . . C 3 105.419 12.16 18.022 1 32.28 ? NC HEM 702 A 1 
HETATM 42 N ND HEM . . . C 3 104.577 9.41 17.402 1 29.43 ? ND HEM 702 A 1 
HETATM 43 FE FE HEM . . . C 3 104.454 10.743 18.993 1 32.65 ? FE HEM 702 A 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           683 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#