data_5ETD # _model_server_result.job_id 488UHb6EGi4oZp_3K0p93A _model_server_result.datetime_utc '2024-11-25 18:12:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5etd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5ETD # _exptl.entry_id 5ETD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 159.185 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(1~{H}-indol-3-yl)ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ETD _cell.length_a 60.32 _cell.length_b 60.32 _cell.length_c 62.92 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ETD _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H9 N O' _chem_comp.formula_weight 159.185 _chem_comp.id 5RN _chem_comp.mon_nstd_flag . _chem_comp.name 1-(1~{H}-indol-3-yl)ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAB CAI 5RN doub 1 n n CAA CAI 5RN sing 2 n n CAI CAJ 5RN sing 3 n n CAF CAD 5RN doub 4 n y CAF CAL 5RN sing 5 n y CAJ CAL 5RN sing 6 n y CAJ CAG 5RN doub 7 n y CAD CAC 5RN sing 8 n y CAL CAK 5RN doub 9 n y CAG NAH 5RN sing 10 n y CAK NAH 5RN sing 11 n y CAK CAE 5RN sing 12 n y CAC CAE 5RN doub 13 n y CAA H1 5RN sing 14 n n CAA H2 5RN sing 15 n n CAA H3 5RN sing 16 n n CAF H4 5RN sing 17 n n CAD H5 5RN sing 18 n n CAC H6 5RN sing 19 n n CAE H7 5RN sing 20 n n NAH H8 5RN sing 21 n n CAG H9 5RN sing 22 n n # _atom_sites.entry_id 5ETD _atom_sites.fract_transf_matrix[1][1] 0.016578 _atom_sites.fract_transf_matrix[1][2] 0.009571 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015893 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5RN A 1 801 1 5RN DRG . C 3 NO3 A 1 802 1 NO3 NO3 . D 4 HOH A 1 901 12 HOH HOH . D 4 HOH A 2 902 73 HOH HOH . D 4 HOH A 3 903 17 HOH HOH . D 4 HOH A 4 904 58 HOH HOH . D 4 HOH A 5 905 99 HOH HOH . D 4 HOH A 6 906 135 HOH HOH . D 4 HOH A 7 907 34 HOH HOH . D 4 HOH A 8 908 2 HOH HOH . D 4 HOH A 9 909 144 HOH HOH . D 4 HOH A 10 910 90 HOH HOH . D 4 HOH A 11 911 132 HOH HOH . D 4 HOH A 12 912 69 HOH HOH . D 4 HOH A 13 913 44 HOH HOH . D 4 HOH A 14 914 78 HOH HOH . D 4 HOH A 15 915 64 HOH HOH . D 4 HOH A 16 916 36 HOH HOH . D 4 HOH A 17 917 84 HOH HOH . D 4 HOH A 18 918 153 HOH HOH . D 4 HOH A 19 919 46 HOH HOH . D 4 HOH A 20 920 129 HOH HOH . D 4 HOH A 21 921 26 HOH HOH . D 4 HOH A 22 922 24 HOH HOH . D 4 HOH A 23 923 112 HOH HOH . D 4 HOH A 24 924 13 HOH HOH . D 4 HOH A 25 925 10 HOH HOH . D 4 HOH A 26 926 49 HOH HOH . D 4 HOH A 27 927 41 HOH HOH . D 4 HOH A 28 928 81 HOH HOH . D 4 HOH A 29 929 43 HOH HOH . D 4 HOH A 30 930 151 HOH HOH . D 4 HOH A 31 931 52 HOH HOH . D 4 HOH A 32 932 31 HOH HOH . D 4 HOH A 33 933 57 HOH HOH . D 4 HOH A 34 934 35 HOH HOH . D 4 HOH A 35 935 92 HOH HOH . D 4 HOH A 36 936 66 HOH HOH . D 4 HOH A 37 937 127 HOH HOH . D 4 HOH A 38 938 19 HOH HOH . D 4 HOH A 39 939 106 HOH HOH . D 4 HOH A 40 940 110 HOH HOH . D 4 HOH A 41 941 8 HOH HOH . D 4 HOH A 42 942 147 HOH HOH . D 4 HOH A 43 943 56 HOH HOH . D 4 HOH A 44 944 29 HOH HOH . D 4 HOH A 45 945 4 HOH HOH . D 4 HOH A 46 946 38 HOH HOH . D 4 HOH A 47 947 6 HOH HOH . D 4 HOH A 48 948 121 HOH HOH . D 4 HOH A 49 949 71 HOH HOH . D 4 HOH A 50 950 130 HOH HOH . D 4 HOH A 51 951 77 HOH HOH . D 4 HOH A 52 952 98 HOH HOH . D 4 HOH A 53 953 1 HOH HOH . D 4 HOH A 54 954 28 HOH HOH . D 4 HOH A 55 955 3 HOH HOH . D 4 HOH A 56 956 93 HOH HOH . D 4 HOH A 57 957 111 HOH HOH . D 4 HOH A 58 958 32 HOH HOH . D 4 HOH A 59 959 86 HOH HOH . D 4 HOH A 60 960 9 HOH HOH . D 4 HOH A 61 961 108 HOH HOH . D 4 HOH A 62 962 18 HOH HOH . D 4 HOH A 63 963 65 HOH HOH . D 4 HOH A 64 964 83 HOH HOH . D 4 HOH A 65 965 70 HOH HOH . D 4 HOH A 66 966 21 HOH HOH . D 4 HOH A 67 967 125 HOH HOH . D 4 HOH A 68 968 89 HOH HOH . D 4 HOH A 69 969 25 HOH HOH . D 4 HOH A 70 970 107 HOH HOH . D 4 HOH A 71 971 20 HOH HOH . D 4 HOH A 72 972 68 HOH HOH . D 4 HOH A 73 973 131 HOH HOH . D 4 HOH A 74 974 59 HOH HOH . D 4 HOH A 75 975 75 HOH HOH . D 4 HOH A 76 976 16 HOH HOH . D 4 HOH A 77 977 88 HOH HOH . D 4 HOH A 78 978 47 HOH HOH . D 4 HOH A 79 979 79 HOH HOH . D 4 HOH A 80 980 7 HOH HOH . D 4 HOH A 81 981 146 HOH HOH . D 4 HOH A 82 982 14 HOH HOH . D 4 HOH A 83 983 60 HOH HOH . D 4 HOH A 84 984 48 HOH HOH . D 4 HOH A 85 985 15 HOH HOH . D 4 HOH A 86 986 82 HOH HOH . D 4 HOH A 87 987 5 HOH HOH . D 4 HOH A 88 988 117 HOH HOH . D 4 HOH A 89 989 11 HOH HOH . D 4 HOH A 90 990 72 HOH HOH . D 4 HOH A 91 991 80 HOH HOH . D 4 HOH A 92 992 27 HOH HOH . D 4 HOH A 93 993 23 HOH HOH . D 4 HOH A 94 994 30 HOH HOH . D 4 HOH A 95 995 97 HOH HOH . D 4 HOH A 96 996 39 HOH HOH . D 4 HOH A 97 997 96 HOH HOH . D 4 HOH A 98 998 152 HOH HOH . D 4 HOH A 99 999 85 HOH HOH . D 4 HOH A 100 1000 137 HOH HOH . D 4 HOH A 101 1001 50 HOH HOH . D 4 HOH A 102 1002 118 HOH HOH . D 4 HOH A 103 1003 124 HOH HOH . D 4 HOH A 104 1004 22 HOH HOH . D 4 HOH A 105 1005 116 HOH HOH . D 4 HOH A 106 1006 139 HOH HOH . D 4 HOH A 107 1007 53 HOH HOH . D 4 HOH A 108 1008 109 HOH HOH . D 4 HOH A 109 1009 87 HOH HOH . D 4 HOH A 110 1010 40 HOH HOH . D 4 HOH A 111 1011 62 HOH HOH . D 4 HOH A 112 1012 42 HOH HOH . D 4 HOH A 113 1013 45 HOH HOH . D 4 HOH A 114 1014 55 HOH HOH . D 4 HOH A 115 1015 115 HOH HOH . D 4 HOH A 116 1016 122 HOH HOH . D 4 HOH A 117 1017 76 HOH HOH . D 4 HOH A 118 1018 138 HOH HOH . D 4 HOH A 119 1019 141 HOH HOH . D 4 HOH A 120 1020 114 HOH HOH . D 4 HOH A 121 1021 128 HOH HOH . D 4 HOH A 122 1022 67 HOH HOH . D 4 HOH A 123 1023 91 HOH HOH . D 4 HOH A 124 1024 105 HOH HOH . D 4 HOH A 125 1025 104 HOH HOH . D 4 HOH A 126 1026 33 HOH HOH . D 4 HOH A 127 1027 120 HOH HOH . D 4 HOH A 128 1028 95 HOH HOH . D 4 HOH A 129 1029 37 HOH HOH . D 4 HOH A 130 1030 74 HOH HOH . D 4 HOH A 131 1031 103 HOH HOH . D 4 HOH A 132 1032 51 HOH HOH . D 4 HOH A 133 1033 61 HOH HOH . D 4 HOH A 134 1034 54 HOH HOH . D 4 HOH A 135 1035 100 HOH HOH . D 4 HOH A 136 1036 150 HOH HOH . D 4 HOH A 137 1037 113 HOH HOH . D 4 HOH A 138 1038 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 5RN . . . B 2 9.336 -13.847 2.589 1 26 ? CAA 5RN 801 A 1 HETATM 2 C CAI 5RN . . . B 2 8.053 -13.018 2.712 1 23.2 ? CAI 5RN 801 A 1 HETATM 3 O OAB 5RN . . . B 2 7.205 -13.017 1.815 1 21.36 ? OAB 5RN 801 A 1 HETATM 4 C CAJ 5RN . . . B 2 7.918 -12.342 3.864 1 24.88 ? CAJ 5RN 801 A 1 HETATM 5 C CAL 5RN . . . B 2 6.918 -11.525 4.216 1 28.06 ? CAL 5RN 801 A 1 HETATM 6 C CAF 5RN . . . B 2 5.81 -11.12 3.586 1 30.55 ? CAF 5RN 801 A 1 HETATM 7 C CAD 5RN . . . B 2 4.929 -10.237 4.202 1 34.49 ? CAD 5RN 801 A 1 HETATM 8 C CAC 5RN . . . B 2 5.221 -9.787 5.483 1 34.55 ? CAC 5RN 801 A 1 HETATM 9 C CAE 5RN . . . B 2 6.385 -10.238 6.088 1 31.48 ? CAE 5RN 801 A 1 HETATM 10 C CAK 5RN . . . B 2 7.199 -11.082 5.451 1 28.11 ? CAK 5RN 801 A 1 HETATM 11 N NAH 5RN . . . B 2 8.347 -11.635 5.844 1 27.06 ? NAH 5RN 801 A 1 HETATM 12 C CAG 5RN . . . B 2 8.798 -12.413 4.865 1 25.99 ? CAG 5RN 801 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #