data_5ETS # _model_server_result.job_id DDXrBc_xsagwwPC_JeKIuQ _model_server_result.datetime_utc '2024-11-04 18:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ets # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":206}' # _entry.id 5ETS # _exptl.entry_id 5ETS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.94 _cell.angle_gamma 90 _cell.entry_id 5ETS _cell.length_a 47.79 _cell.length_b 68.58 _cell.length_c 52.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ETS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 30 B ASN 27 1_555 E NA NA . B NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc2 A O TYR 32 B TYR 29 1_555 E NA NA . B NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc3 A O ILE 35 B ILE 32 1_555 E NA NA . B NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 A OD2 ASP 98 B ASP 95 1_555 F MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc5 A OD1 ASP 98 B ASP 95 1_555 G MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc6 A OD2 ASP 100 B ASP 97 1_555 F MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc7 A OD1 ASP 100 B ASP 97 1_555 G MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc8 A OD1 ASP 110 B ASP 107 1_555 H NA NA . B NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc9 C O1G APC . B APC 201 1_555 F MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc10 C O2B APC . B APC 201 1_555 F MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc11 C O2B APC . B APC 201 1_555 G MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc12 C O1A APC . B APC 201 1_555 G MG MG . B MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc13 E NA NA . B NA 203 1_555 N O HOH . B HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc14 E NA NA . B NA 203 1_555 N O HOH . B HOH 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc15 E NA NA . B NA 203 1_555 O O HOH . A HOH 356 1_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc16 F MG MG . B MG 204 1_555 N O HOH . B HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc17 F MG MG . B MG 204 1_555 N O HOH . B HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc18 G MG MG . B MG 205 1_555 N O HOH . B HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc19 G MG MG . B MG 205 1_555 N O HOH . B HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc20 H NA NA . B NA 206 1_555 B OD1 ASP 110 A ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc21 N O HOH . B HOH 320 1_656 K NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc22 N O HOH . B HOH 372 1_656 K NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc23 B O ASN 30 A ASN 27 1_555 K NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc24 B O TYR 32 A TYR 29 1_555 K NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc25 B O ILE 35 A ILE 32 1_555 K NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc26 B OD1 ASP 98 A ASP 95 1_555 L MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc27 B OD2 ASP 98 A ASP 95 1_555 M MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc28 B OD1 ASP 100 A ASP 97 1_555 L MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc29 B OD2 ASP 100 A ASP 97 1_555 M MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc30 I O1B APC . A APC 201 1_555 L MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc31 I O2A APC . A APC 201 1_555 L MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc32 I O2G APC . A APC 201 1_555 M MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc33 I O1B APC . A APC 201 1_555 M MG MG . A MG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc34 K NA NA . A NA 203 1_555 O O HOH . A HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc35 L MG MG . A MG 204 1_555 O O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc36 L MG MG . A MG 204 1_555 O O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc37 M MG MG . A MG 205 1_555 O O HOH . A HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc38 M MG MG . A MG 205 1_555 O O HOH . A HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ETS _atom_sites.fract_transf_matrix[1][1] 0.020925 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005976 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 APC B 1 201 1 APC APC . D 3 5RX B 1 202 2 5RX UNL . E 4 NA B 1 203 1 NA NA . F 5 MG B 1 204 1 MG MG . G 5 MG B 1 205 2 MG MG . H 4 NA B 1 206 3 NA NA . I 2 APC A 1 201 2 APC APC . J 3 5RX A 1 202 1 5RX UNL . K 4 NA A 1 203 2 NA NA . L 5 MG A 1 204 3 MG MG . M 5 MG A 1 205 4 MG MG . N 6 HOH B 1 301 50 HOH HOH . N 6 HOH B 2 302 72 HOH HOH . N 6 HOH B 3 303 96 HOH HOH . N 6 HOH B 4 304 38 HOH HOH . N 6 HOH B 5 305 62 HOH HOH . N 6 HOH B 6 306 76 HOH HOH . N 6 HOH B 7 307 73 HOH HOH . N 6 HOH B 8 308 27 HOH HOH . N 6 HOH B 9 309 81 HOH HOH . N 6 HOH B 10 310 40 HOH HOH . N 6 HOH B 11 311 54 HOH HOH . N 6 HOH B 12 312 10 HOH HOH . N 6 HOH B 13 313 33 HOH HOH . N 6 HOH B 14 314 91 HOH HOH . N 6 HOH B 15 315 61 HOH HOH . N 6 HOH B 16 316 68 HOH HOH . N 6 HOH B 17 317 107 HOH HOH . N 6 HOH B 18 318 92 HOH HOH . N 6 HOH B 19 319 41 HOH HOH . N 6 HOH B 20 320 47 HOH HOH . N 6 HOH B 21 321 64 HOH HOH . N 6 HOH B 22 322 45 HOH HOH . N 6 HOH B 23 323 22 HOH HOH . N 6 HOH B 24 324 79 HOH HOH . N 6 HOH B 25 325 8 HOH HOH . N 6 HOH B 26 326 9 HOH HOH . N 6 HOH B 27 327 111 HOH HOH . N 6 HOH B 28 328 83 HOH HOH . N 6 HOH B 29 329 37 HOH HOH . N 6 HOH B 30 330 71 HOH HOH . N 6 HOH B 31 331 102 HOH HOH . N 6 HOH B 32 332 153 HOH HOH . N 6 HOH B 33 333 155 HOH HOH . N 6 HOH B 34 334 108 HOH HOH . N 6 HOH B 35 335 147 HOH HOH . N 6 HOH B 36 336 58 HOH HOH . N 6 HOH B 37 337 114 HOH HOH . N 6 HOH B 38 338 56 HOH HOH . N 6 HOH B 39 339 94 HOH HOH . N 6 HOH B 40 340 24 HOH HOH . N 6 HOH B 41 341 156 HOH HOH . N 6 HOH B 42 342 122 HOH HOH . N 6 HOH B 43 343 115 HOH HOH . N 6 HOH B 44 344 57 HOH HOH . N 6 HOH B 45 345 127 HOH HOH . N 6 HOH B 46 346 29 HOH HOH . N 6 HOH B 47 347 67 HOH HOH . N 6 HOH B 48 348 53 HOH HOH . N 6 HOH B 49 349 112 HOH HOH . N 6 HOH B 50 350 66 HOH HOH . N 6 HOH B 51 351 93 HOH HOH . N 6 HOH B 52 352 85 HOH HOH . N 6 HOH B 53 353 80 HOH HOH . N 6 HOH B 54 354 106 HOH HOH . N 6 HOH B 55 355 78 HOH HOH . N 6 HOH B 56 356 137 HOH HOH . N 6 HOH B 57 357 4 HOH HOH . N 6 HOH B 58 358 46 HOH HOH . N 6 HOH B 59 359 23 HOH HOH . N 6 HOH B 60 360 144 HOH HOH . N 6 HOH B 61 361 87 HOH HOH . N 6 HOH B 62 362 135 HOH HOH . N 6 HOH B 63 363 44 HOH HOH . N 6 HOH B 64 364 36 HOH HOH . N 6 HOH B 65 365 7 HOH HOH . N 6 HOH B 66 366 75 HOH HOH . N 6 HOH B 67 367 14 HOH HOH . N 6 HOH B 68 368 42 HOH HOH . N 6 HOH B 69 369 110 HOH HOH . N 6 HOH B 70 370 11 HOH HOH . N 6 HOH B 71 371 70 HOH HOH . N 6 HOH B 72 372 51 HOH HOH . N 6 HOH B 73 373 69 HOH HOH . N 6 HOH B 74 374 125 HOH HOH . N 6 HOH B 75 375 90 HOH HOH . N 6 HOH B 76 376 124 HOH HOH . N 6 HOH B 77 377 98 HOH HOH . N 6 HOH B 78 378 13 HOH HOH . N 6 HOH B 79 379 152 HOH HOH . N 6 HOH B 80 380 25 HOH HOH . N 6 HOH B 81 381 146 HOH HOH . N 6 HOH B 82 382 149 HOH HOH . N 6 HOH B 83 383 118 HOH HOH . N 6 HOH B 84 384 140 HOH HOH . N 6 HOH B 85 385 31 HOH HOH . N 6 HOH B 86 386 103 HOH HOH . N 6 HOH B 87 387 151 HOH HOH . N 6 HOH B 88 388 139 HOH HOH . N 6 HOH B 89 389 154 HOH HOH . N 6 HOH B 90 390 145 HOH HOH . O 6 HOH A 1 301 86 HOH HOH . O 6 HOH A 2 302 158 HOH HOH . O 6 HOH A 3 303 141 HOH HOH . O 6 HOH A 4 304 138 HOH HOH . O 6 HOH A 5 305 39 HOH HOH . O 6 HOH A 6 306 120 HOH HOH . O 6 HOH A 7 307 134 HOH HOH . O 6 HOH A 8 308 99 HOH HOH . O 6 HOH A 9 309 26 HOH HOH . O 6 HOH A 10 310 131 HOH HOH . O 6 HOH A 11 311 35 HOH HOH . O 6 HOH A 12 312 117 HOH HOH . O 6 HOH A 13 313 17 HOH HOH . O 6 HOH A 14 314 119 HOH HOH . O 6 HOH A 15 315 143 HOH HOH . O 6 HOH A 16 316 82 HOH HOH . O 6 HOH A 17 317 60 HOH HOH . O 6 HOH A 18 318 55 HOH HOH . O 6 HOH A 19 319 34 HOH HOH . O 6 HOH A 20 320 59 HOH HOH . O 6 HOH A 21 321 148 HOH HOH . O 6 HOH A 22 322 105 HOH HOH . O 6 HOH A 23 323 5 HOH HOH . O 6 HOH A 24 324 2 HOH HOH . O 6 HOH A 25 325 21 HOH HOH . O 6 HOH A 26 326 130 HOH HOH . O 6 HOH A 27 327 3 HOH HOH . O 6 HOH A 28 328 116 HOH HOH . O 6 HOH A 29 329 63 HOH HOH . O 6 HOH A 30 330 48 HOH HOH . O 6 HOH A 31 331 6 HOH HOH . O 6 HOH A 32 332 136 HOH HOH . O 6 HOH A 33 333 128 HOH HOH . O 6 HOH A 34 334 28 HOH HOH . O 6 HOH A 35 335 126 HOH HOH . O 6 HOH A 36 336 104 HOH HOH . O 6 HOH A 37 337 89 HOH HOH . O 6 HOH A 38 338 43 HOH HOH . O 6 HOH A 39 339 123 HOH HOH . O 6 HOH A 40 340 74 HOH HOH . O 6 HOH A 41 341 109 HOH HOH . O 6 HOH A 42 342 49 HOH HOH . O 6 HOH A 43 343 150 HOH HOH . O 6 HOH A 44 344 157 HOH HOH . O 6 HOH A 45 345 88 HOH HOH . O 6 HOH A 46 346 12 HOH HOH . O 6 HOH A 47 347 18 HOH HOH . O 6 HOH A 48 348 15 HOH HOH . O 6 HOH A 49 349 20 HOH HOH . O 6 HOH A 50 350 100 HOH HOH . O 6 HOH A 51 351 77 HOH HOH . O 6 HOH A 52 352 84 HOH HOH . O 6 HOH A 53 353 95 HOH HOH . O 6 HOH A 54 354 32 HOH HOH . O 6 HOH A 55 355 65 HOH HOH . O 6 HOH A 56 356 52 HOH HOH . O 6 HOH A 57 357 19 HOH HOH . O 6 HOH A 58 358 113 HOH HOH . O 6 HOH A 59 359 133 HOH HOH . O 6 HOH A 60 360 129 HOH HOH . O 6 HOH A 61 361 97 HOH HOH . O 6 HOH A 62 362 16 HOH HOH . O 6 HOH A 63 363 121 HOH HOH . O 6 HOH A 64 364 132 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 31.174 _atom_site.Cartn_y -14.675 _atom_site.Cartn_z -15.61 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 206 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #