data_5ETY
#
_model_server_result.job_id            d2ScChhtD9xd5oK4QvV0fw 
_model_server_result.datetime_utc      '2025-01-02 20:01:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ety 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1402}' 
#
_entry.id    5ETY 
#
_exptl.entry_id    5ETY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              433.503 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-[[1-(6,7-dimethoxyquinazolin-4-yl)piperidin-4-yl]methyl]-1,4-dihydroquinazolin-2-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ETY 
_cell.length_a            158.846 
_cell.length_b            74.68 
_cell.length_c            84.603 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ETY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,M 1 1 
B,G,H,N 2 1 
C,I,J,O 3 1 
D,K,L,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 167 A CYS 1234 1_555 E ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? 
metalc ? metalc2 A ND1 HIS 170 A HIS 1237 1_555 E ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc3 A SG CYS 175 A CYS 1242 1_555 E ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc4 A SG CYS 178 A CYS 1245 1_555 E ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc5 B SG CYS 167 B CYS 1234 1_555 G ZN ZN . B ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc6 B ND1 HIS 170 B HIS 1237 1_555 G ZN ZN . B ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc7 B SG CYS 175 B CYS 1242 1_555 G ZN ZN . B ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc8 C SG CYS 167 C CYS 1234 1_555 I ZN ZN . C ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc9 C ND1 HIS 170 C HIS 1237 1_555 I ZN ZN . C ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc10 C SG CYS 175 C CYS 1242 1_555 I ZN ZN . C ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc11 C SG CYS 178 C CYS 1245 1_555 I ZN ZN . C ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc12 D SG CYS 167 D CYS 1234 1_555 K ZN ZN . D ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc13 D ND1 HIS 170 D HIS 1237 1_555 K ZN ZN . D ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? 
metalc ? metalc14 D SG CYS 175 D CYS 1242 1_555 K ZN ZN . D ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc15 D SG CYS 178 D CYS 1245 1_555 K ZN ZN . D ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
#
_chem_comp.formula           'C24 H27 N5 O3' 
_chem_comp.formula_weight    433.503 
_chem_comp.id                K56 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-[[1-(6,7-dimethoxyquinazolin-4-yl)piperidin-4-yl]methyl]-1,4-dihydroquinazolin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 O2 K56 sing 173 n n 
O2 C10 K56 sing 174 n n 
C10 C5 K56 doub 175 n y 
C10 C6 K56 sing 176 n y 
C5 C3 K56 sing 177 n y 
O1 C6 K56 sing 178 n n 
O1 C13 K56 sing 179 n n 
C6 C4 K56 doub 180 n y 
C3 N3 K56 doub 181 n y 
C3 C1 K56 sing 182 n y 
N3 C9 K56 sing 183 n y 
C4 C1 K56 sing 184 n y 
C1 C2 K56 doub 185 n y 
C9 N2 K56 doub 186 n y 
C2 N2 K56 sing 187 n y 
C2 N1 K56 sing 188 n n 
N1 C8 K56 sing 189 n n 
N1 C7 K56 sing 190 n n 
C8 C12 K56 sing 191 n n 
C7 C11 K56 sing 192 n n 
C12 C14 K56 sing 193 n n 
C11 C14 K56 sing 194 n n 
C21 C23 K56 doub 195 n y 
C21 C19 K56 sing 196 n y 
C14 C16 K56 sing 197 n n 
C17 C19 K56 sing 198 n n 
C17 N4 K56 sing 199 n n 
C23 C24 K56 sing 200 n y 
C16 N4 K56 sing 201 n n 
C19 C20 K56 doub 202 n y 
N4 C18 K56 sing 203 n n 
C24 C22 K56 doub 204 n y 
C20 C22 K56 sing 205 n y 
C20 N5 K56 sing 206 n n 
C18 N5 K56 sing 207 n n 
C18 O3 K56 doub 208 n n 
N5 H1 K56 sing 209 n n 
C22 H2 K56 sing 210 n n 
C24 H3 K56 sing 211 n n 
C23 H4 K56 sing 212 n n 
C21 H5 K56 sing 213 n n 
C17 H6 K56 sing 214 n n 
C17 H7 K56 sing 215 n n 
C16 H8 K56 sing 216 n n 
C16 H9 K56 sing 217 n n 
C14 H10 K56 sing 218 n n 
C11 H11 K56 sing 219 n n 
C11 H12 K56 sing 220 n n 
C7 H13 K56 sing 221 n n 
C7 H14 K56 sing 222 n n 
C12 H15 K56 sing 223 n n 
C12 H16 K56 sing 224 n n 
C8 H17 K56 sing 225 n n 
C8 H18 K56 sing 226 n n 
C9 H19 K56 sing 227 n n 
C5 H20 K56 sing 228 n n 
C15 H21 K56 sing 229 n n 
C15 H22 K56 sing 230 n n 
C15 H23 K56 sing 231 n n 
C4 H24 K56 sing 232 n n 
C13 H25 K56 sing 233 n n 
C13 H26 K56 sing 234 n n 
C13 H27 K56 sing 235 n n 
#
_atom_sites.entry_id                     5ETY 
_atom_sites.fract_transf_matrix[1][1]    0.006295 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01339 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01182 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 1401 1 ZN ZN . 
F 3 K56 A 1 1402 1001 K56 K56 . 
G 2 ZN B 1 1401 1 ZN ZN . 
H 3 K56 B 1 1402 1001 K56 K56 . 
I 2 ZN C 1 1401 1 ZN ZN . 
J 3 K56 C 1 1402 1001 K56 K56 . 
K 2 ZN D 1 1401 1 ZN ZN . 
L 3 K56 D 1 1402 1001 K56 K56 . 
M 4 HOH A 1 1501 66 HOH HOH . 
M 4 HOH A 2 1502 28 HOH HOH . 
M 4 HOH A 3 1503 71 HOH HOH . 
M 4 HOH A 4 1504 48 HOH HOH . 
M 4 HOH A 5 1505 51 HOH HOH . 
M 4 HOH A 6 1506 73 HOH HOH . 
M 4 HOH A 7 1507 25 HOH HOH . 
M 4 HOH A 8 1508 6 HOH HOH . 
M 4 HOH A 9 1509 44 HOH HOH . 
M 4 HOH A 10 1510 59 HOH HOH . 
M 4 HOH A 11 1511 37 HOH HOH . 
M 4 HOH A 12 1512 15 HOH HOH . 
M 4 HOH A 13 1513 53 HOH HOH . 
M 4 HOH A 14 1514 7 HOH HOH . 
M 4 HOH A 15 1515 43 HOH HOH . 
M 4 HOH A 16 1516 46 HOH HOH . 
M 4 HOH A 17 1517 17 HOH HOH . 
M 4 HOH A 18 1518 16 HOH HOH . 
M 4 HOH A 19 1519 61 HOH HOH . 
M 4 HOH A 20 1520 24 HOH HOH . 
N 4 HOH B 1 1501 68 HOH HOH . 
N 4 HOH B 2 1502 10 HOH HOH . 
N 4 HOH B 3 1503 41 HOH HOH . 
N 4 HOH B 4 1504 11 HOH HOH . 
N 4 HOH B 5 1505 50 HOH HOH . 
N 4 HOH B 6 1506 29 HOH HOH . 
N 4 HOH B 7 1507 38 HOH HOH . 
N 4 HOH B 8 1508 57 HOH HOH . 
N 4 HOH B 9 1509 52 HOH HOH . 
N 4 HOH B 10 1510 67 HOH HOH . 
N 4 HOH B 11 1511 70 HOH HOH . 
N 4 HOH B 12 1512 35 HOH HOH . 
N 4 HOH B 13 1513 30 HOH HOH . 
N 4 HOH B 14 1514 72 HOH HOH . 
N 4 HOH B 15 1515 26 HOH HOH . 
N 4 HOH B 16 1516 14 HOH HOH . 
N 4 HOH B 17 1517 69 HOH HOH . 
N 4 HOH B 18 1518 18 HOH HOH . 
N 4 HOH B 19 1519 27 HOH HOH . 
N 4 HOH B 20 1520 19 HOH HOH . 
O 4 HOH C 1 1501 40 HOH HOH . 
O 4 HOH C 2 1502 8 HOH HOH . 
O 4 HOH C 3 1503 49 HOH HOH . 
O 4 HOH C 4 1504 12 HOH HOH . 
O 4 HOH C 5 1505 2 HOH HOH . 
O 4 HOH C 6 1506 55 HOH HOH . 
O 4 HOH C 7 1507 36 HOH HOH . 
O 4 HOH C 8 1508 23 HOH HOH . 
O 4 HOH C 9 1509 33 HOH HOH . 
O 4 HOH C 10 1510 1 HOH HOH . 
O 4 HOH C 11 1511 56 HOH HOH . 
O 4 HOH C 12 1512 20 HOH HOH . 
O 4 HOH C 13 1513 21 HOH HOH . 
O 4 HOH C 14 1514 62 HOH HOH . 
O 4 HOH C 15 1515 22 HOH HOH . 
P 4 HOH D 1 1501 5 HOH HOH . 
P 4 HOH D 2 1502 65 HOH HOH . 
P 4 HOH D 3 1503 34 HOH HOH . 
P 4 HOH D 4 1504 54 HOH HOH . 
P 4 HOH D 5 1505 4 HOH HOH . 
P 4 HOH D 6 1506 39 HOH HOH . 
P 4 HOH D 7 1507 42 HOH HOH . 
P 4 HOH D 8 1508 60 HOH HOH . 
P 4 HOH D 9 1509 9 HOH HOH . 
P 4 HOH D 10 1510 58 HOH HOH . 
P 4 HOH D 11 1511 64 HOH HOH . 
P 4 HOH D 12 1512 3 HOH HOH . 
P 4 HOH D 13 1513 45 HOH HOH . 
P 4 HOH D 14 1514 31 HOH HOH . 
P 4 HOH D 15 1515 32 HOH HOH . 
P 4 HOH D 16 1516 74 HOH HOH . 
P 4 HOH D 17 1517 13 HOH HOH . 
P 4 HOH D 18 1518 47 HOH HOH . 
P 4 HOH D 19 1519 63 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 K56 . . . L 3 -45.705 -22.896 -16.64 1 41.63 ? O3 K56 1402 D 1 
HETATM 2 C C18 K56 . . . L 3 -45.316 -23.897 -17.226 1 43.14 ? C18 K56 1402 D 1 
HETATM 3 N N5 K56 . . . L 3 -44.137 -24.378 -16.877 1 43.45 ? N5 K56 1402 D 1 
HETATM 4 C C20 K56 . . . L 3 -43.541 -25.496 -17.429 1 44.65 ? C20 K56 1402 D 1 
HETATM 5 C C22 K56 . . . L 3 -42.286 -25.886 -16.97 1 44.99 ? C22 K56 1402 D 1 
HETATM 6 C C24 K56 . . . L 3 -41.669 -27.004 -17.511 1 45.93 ? C24 K56 1402 D 1 
HETATM 7 C C23 K56 . . . L 3 -42.312 -27.708 -18.515 1 47.16 ? C23 K56 1402 D 1 
HETATM 8 C C21 K56 . . . L 3 -43.569 -27.288 -18.964 1 47.67 ? C21 K56 1402 D 1 
HETATM 9 C C19 K56 . . . L 3 -44.209 -26.177 -18.421 1 45.55 ? C19 K56 1402 D 1 
HETATM 10 C C17 K56 . . . L 3 -45.567 -25.707 -18.879 1 45.15 ? C17 K56 1402 D 1 
HETATM 11 N N4 K56 . . . L 3 -46.032 -24.526 -18.171 1 44.69 ? N4 K56 1402 D 1 
HETATM 12 C C16 K56 . . . L 3 -47.281 -23.869 -18.571 1 44.92 ? C16 K56 1402 D 1 
HETATM 13 C C14 K56 . . . L 3 -46.859 -22.546 -19.373 1 44.41 ? C14 K56 1402 D 1 
HETATM 14 C C11 K56 . . . L 3 -47.933 -21.736 -20.128 1 44.67 ? C11 K56 1402 D 1 
HETATM 15 C C7 K56 . . . L 3 -47.445 -20.49 -20.932 1 43.79 ? C7 K56 1402 D 1 
HETATM 16 C C12 K56 . . . L 3 -45.808 -22.795 -20.481 1 44.63 ? C12 K56 1402 D 1 
HETATM 17 C C8 K56 . . . L 3 -45.267 -21.562 -21.224 1 43.27 ? C8 K56 1402 D 1 
HETATM 18 N N1 K56 . . . L 3 -46.321 -20.753 -21.823 1 43.03 ? N1 K56 1402 D 1 
HETATM 19 C C2 K56 . . . L 3 -46.092 -20.089 -23.001 1 42.55 ? C2 K56 1402 D 1 
HETATM 20 N N2 K56 . . . L 3 -46.301 -18.757 -22.983 1 42.71 ? N2 K56 1402 D 1 
HETATM 21 C C9 K56 . . . L 3 -46.049 -18.063 -24.105 1 42.95 ? C9 K56 1402 D 1 
HETATM 22 N N3 K56 . . . L 3 -45.615 -18.514 -25.274 1 42.47 ? N3 K56 1402 D 1 
HETATM 23 C C3 K56 . . . L 3 -45.411 -19.832 -25.324 1 42.78 ? C3 K56 1402 D 1 
HETATM 24 C C1 K56 . . . L 3 -45.63 -20.689 -24.212 1 42.62 ? C1 K56 1402 D 1 
HETATM 25 C C5 K56 . . . L 3 -44.956 -20.365 -26.547 1 43.72 ? C5 K56 1402 D 1 
HETATM 26 C C10 K56 . . . L 3 -44.707 -21.737 -26.711 1 44.12 ? C10 K56 1402 D 1 
HETATM 27 O O2 K56 . . . L 3 -44.261 -22.366 -27.82 1 46.41 ? O2 K56 1402 D 1 
HETATM 28 C C15 K56 . . . L 3 -44.408 -21.758 -29.084 1 48.12 ? C15 K56 1402 D 1 
HETATM 29 C C6 K56 . . . L 3 -44.914 -22.606 -25.652 1 43.57 ? C6 K56 1402 D 1 
HETATM 30 C C4 K56 . . . L 3 -45.373 -22.069 -24.425 1 43.59 ? C4 K56 1402 D 1 
HETATM 31 O O1 K56 . . . L 3 -44.627 -23.912 -25.921 1 43.65 ? O1 K56 1402 D 1 
HETATM 32 C C13 K56 . . . L 3 -45.266 -24.933 -25.189 1 43.87 ? C13 K56 1402 D 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           32 
#