data_5EUQ # _model_server_result.job_id apzd-8ODFm10374exJLriw _model_server_result.datetime_utc '2024-11-25 23:38:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5euq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1003}' # _entry.id 5EUQ # _exptl.entry_id 5EUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.608 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[5-[3-[[(4-hydroxyphenyl)amino]-bis(oxidanyl)-$l^{4}-sulfanyl]-4-methoxy-phenyl]-4-methyl-1,3-thiazol-2-yl]cyclopentanecarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EUQ _cell.length_a 48.9 _cell.length_b 103.49 _cell.length_c 188.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H27 N3 O5 S2' _chem_comp.formula_weight 489.608 _chem_comp.id 5S8 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[5-[3-[[(4-hydroxyphenyl)amino]-bis(oxidanyl)-$l^{4}-sulfanyl]-4-methoxy-phenyl]-4-methyl-1,3-thiazol-2-yl]cyclopentanecarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAC 5S8 doub 1 n y CAB CAE 5S8 sing 2 n y CAC CAD 5S8 sing 3 n y CAC OAA 5S8 sing 4 n n CAD CAG 5S8 doub 5 n y CAE CAF 5S8 doub 6 n y CAF CAG 5S8 sing 7 n y CAF NAH 5S8 sing 8 n n CAL CAM 5S8 doub 9 n y CAL CAQ 5S8 sing 10 n y CAM CAN 5S8 sing 11 n y CAM SAJ 5S8 sing 12 n n CAN CAS 5S8 doub 13 n y CAN OAO 5S8 sing 14 n n CAP OAO 5S8 sing 15 n n CAQ CAR 5S8 doub 16 n y CAQ CAT 5S8 sing 17 n n CAR CAS 5S8 sing 18 n y CAT CAU 5S8 doub 19 n y CAT SAW 5S8 sing 20 n y CAU CAV 5S8 sing 21 n n CAU NAZ 5S8 sing 22 n y CAY NAX 5S8 sing 23 n n CAY NAZ 5S8 doub 24 n y CAY SAW 5S8 sing 25 n y NAH SAJ 5S8 sing 26 n n NAX CBA 5S8 sing 27 n n OAI SAJ 5S8 sing 28 n n OAK SAJ 5S8 sing 29 n n CBA CBC 5S8 sing 30 n n CBA OBB 5S8 doub 31 n n CBC CBD 5S8 sing 32 n n CBC CBE 5S8 sing 33 n n CBD CBG 5S8 sing 34 n n CBE CBF 5S8 sing 35 n n CBF CBG 5S8 sing 36 n n CAB HAB 5S8 sing 37 n n CAD HAD 5S8 sing 38 n n CAE HAE 5S8 sing 39 n n CAG HAG 5S8 sing 40 n n CAL HAL 5S8 sing 41 n n CAP HAP 5S8 sing 42 n n CAP HAQ 5S8 sing 43 n n CAP HAR 5S8 sing 44 n n CAR HAS 5S8 sing 45 n n CAS HAT 5S8 sing 46 n n CAV HAV 5S8 sing 47 n n CAV HAW 5S8 sing 48 n n CAV HAX 5S8 sing 49 n n NAH HAH 5S8 sing 50 n n NAX HBL 5S8 sing 51 n n OAA HAA 5S8 sing 52 n n OAI H1 5S8 sing 53 n n OAK H2 5S8 sing 54 n n CBC HBC 5S8 sing 55 n n CBD HBD 5S8 sing 56 n n CBD HBE 5S8 sing 57 n n CBE HBF 5S8 sing 58 n n CBE HBG 5S8 sing 59 n n CBF HBH 5S8 sing 60 n n CBF HBI 5S8 sing 61 n n CBG HBJ 5S8 sing 62 n n CBG HBK 5S8 sing 63 n n # _atom_sites.entry_id 5EUQ _atom_sites.fract_transf_matrix[1][1] 0.02045 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009663 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GDP B 1 301 1174 GDP GDP . D 4 SO4 E 1 1001 1001 SO4 SO4 . E 4 SO4 E 1 1002 1002 SO4 SO4 . F 5 5S8 E 1 1003 2001 5S8 DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB 5S8 . . . F 5 -228.462 221.291 419.278 1 107.03 ? CAB 5S8 1003 E 1 HETATM 2 C CAC 5S8 . . . F 5 -227.349 221.234 420.104 1 103.96 ? CAC 5S8 1003 E 1 HETATM 3 C CAD 5S8 . . . F 5 -226.472 220.156 420 1 98.5 ? CAD 5S8 1003 E 1 HETATM 4 C CAE 5S8 . . . F 5 -228.702 220.275 418.348 1 105.21 ? CAE 5S8 1003 E 1 HETATM 5 C CAF 5S8 . . . F 5 -227.824 219.198 418.246 1 99.6 ? CAF 5S8 1003 E 1 HETATM 6 C CAG 5S8 . . . F 5 -226.71 219.14 419.071 1 97.01 ? CAG 5S8 1003 E 1 HETATM 7 C CAL 5S8 . . . F 5 -224.558 218.79 415.802 1 105.18 ? CAL 5S8 1003 E 1 HETATM 8 C CAM 5S8 . . . F 5 -225.919 218.539 415.512 1 107.54 ? CAM 5S8 1003 E 1 HETATM 9 C CAN 5S8 . . . F 5 -226.554 219.196 414.431 1 112.16 ? CAN 5S8 1003 E 1 HETATM 10 C CAP 5S8 . . . F 5 -228.354 218.864 412.751 1 109.15 ? CAP 5S8 1003 E 1 HETATM 11 C CAQ 5S8 . . . F 5 -223.823 219.702 415.024 1 108.58 ? CAQ 5S8 1003 E 1 HETATM 12 C CAR 5S8 . . . F 5 -224.444 220.365 413.953 1 113.24 ? CAR 5S8 1003 E 1 HETATM 13 C CAS 5S8 . . . F 5 -225.812 220.112 413.658 1 114.37 ? CAS 5S8 1003 E 1 HETATM 14 C CAT 5S8 . . . F 5 -222.318 219.959 415.376 1 103.3 ? CAT 5S8 1003 E 1 HETATM 15 C CAU 5S8 . . . F 5 -221.259 220.432 414.48 1 104.12 ? CAU 5S8 1003 E 1 HETATM 16 C CAV 5S8 . . . F 5 -221.415 220.761 413.035 1 105.59 ? CAV 5S8 1003 E 1 HETATM 17 C CAY 5S8 . . . F 5 -220.141 220.128 416.7 1 113.53 ? CAY 5S8 1003 E 1 HETATM 18 N NAH 5S8 . . . F 5 -228.079 218.153 417.289 1 96.27 ? NAH 5S8 1003 E 1 HETATM 19 N NAX 5S8 . . . F 5 -219.133 220.085 417.742 1 111.65 ? NAX 5S8 1003 E 1 HETATM 20 N NAZ 5S8 . . . F 5 -219.897 220.53 415.338 1 113.69 ? NAZ 5S8 1003 E 1 HETATM 21 O OAA 5S8 . . . F 5 -227.101 222.257 421.042 1 104.27 ? OAA 5S8 1003 E 1 HETATM 22 O OAI 5S8 . . . F 5 -225.997 216.657 417.428 1 127.44 ? OAI 5S8 1003 E 1 HETATM 23 O OAK 5S8 . . . F 5 -227.322 216.298 415.721 1 121.2 ? OAK 5S8 1003 E 1 HETATM 24 O OAO 5S8 . . . F 5 -227.964 218.916 414.15 1 112.08 ? OAO 5S8 1003 E 1 HETATM 25 S SAJ 5S8 . . . F 5 -226.84 217.379 416.511 1 122.97 ? SAJ 5S8 1003 E 1 HETATM 26 S SAW 5S8 . . . F 5 -221.684 219.75 416.781 1 104.18 ? SAW 5S8 1003 E 1 HETATM 27 C CBA 5S8 . . . F 5 -219.391 220.072 419.189 1 111.25 ? CBA 5S8 1003 E 1 HETATM 28 C CBC 5S8 . . . F 5 -220.779 220.107 419.814 1 123.26 ? CBC 5S8 1003 E 1 HETATM 29 C CBD 5S8 . . . F 5 -221.502 221.445 419.656 1 134.08 ? CBD 5S8 1003 E 1 HETATM 30 C CBE 5S8 . . . F 5 -220.766 219.981 421.313 1 127.84 ? CBE 5S8 1003 E 1 HETATM 31 C CBF 5S8 . . . F 5 -222.16 220.33 421.666 1 133.34 ? CBF 5S8 1003 E 1 HETATM 32 C CBG 5S8 . . . F 5 -222.313 221.635 420.968 1 137.19 ? CBG 5S8 1003 E 1 HETATM 33 O OBB 5S8 . . . F 5 -218.422 220.029 419.927 1 99.55 ? OBB 5S8 1003 E 1 HETATM 34 H HAB 5S8 . . . F 5 -229.079 222.043 419.346 1 129.44 ? HAB 5S8 1003 E 1 HETATM 35 H HAD 5S8 . . . F 5 -225.688 220.111 420.577 1 119.2 ? HAD 5S8 1003 E 1 HETATM 36 H HAE 5S8 . . . F 5 -229.485 220.318 417.772 1 127.25 ? HAE 5S8 1003 E 1 HETATM 37 H HAG 5S8 . . . F 5 -226.097 218.392 419.005 1 117.41 ? HAG 5S8 1003 E 1 HETATM 38 H HAL 5S8 . . . F 5 -224.127 218.33 416.551 1 127.22 ? HAL 5S8 1003 E 1 HETATM 39 H HAP 5S8 . . . F 5 -227.89 219.573 412.254 1 131.98 ? HAP 5S8 1003 E 1 HETATM 40 H HAQ 5S8 . . . F 5 -229.327 218.996 412.676 1 131.98 ? HAQ 5S8 1003 E 1 HETATM 41 H HAR 5S8 . . . F 5 -228.112 217.987 412.374 1 131.98 ? HAR 5S8 1003 E 1 HETATM 42 H HAS 5S8 . . . F 5 -223.934 221 413.408 1 136.88 ? HAS 5S8 1003 E 1 HETATM 43 H HAT 5S8 . . . F 5 -226.238 220.571 412.912 1 138.24 ? HAT 5S8 1003 E 1 HETATM 44 H HAV 5S8 . . . F 5 -220.535 220.81 412.616 1 127.71 ? HAV 5S8 1003 E 1 HETATM 45 H HAW 5S8 . . . F 5 -221.87 221.624 412.944 1 127.71 ? HAW 5S8 1003 E 1 HETATM 46 H HAX 5S8 . . . F 5 -221.942 220.069 412.6 1 127.71 ? HAX 5S8 1003 E 1 HETATM 47 H HAH 5S8 . . . F 5 -228.944 217.912 417.108 1 116.53 ? HAH 5S8 1003 E 1 HETATM 48 H HBL 5S8 . . . F 5 -218.266 220.059 417.477 1 134.99 ? HBL 5S8 1003 E 1 HETATM 49 H HAA 5S8 . . . F 5 -227.476 223.016 420.761 1 126.12 ? HAA 5S8 1003 E 1 HETATM 50 H HBC 5S8 . . . F 5 -221.219 219.363 419.358 1 148.92 ? HBC 5S8 1003 E 1 HETATM 51 H HBD 5S8 . . . F 5 -220.852 222.172 419.55 1 161.9 ? HBD 5S8 1003 E 1 HETATM 52 H HBE 5S8 . . . F 5 -222.102 221.415 418.89 1 161.9 ? HBE 5S8 1003 E 1 HETATM 53 H HBF 5S8 . . . F 5 -220.557 219.061 421.584 1 154.41 ? HBF 5S8 1003 E 1 HETATM 54 H HBG 5S8 . . . F 5 -220.139 220.613 421.709 1 154.41 ? HBG 5S8 1003 E 1 HETATM 55 H HBH 5S8 . . . F 5 -222.262 220.435 422.631 1 161.01 ? HBH 5S8 1003 E 1 HETATM 56 H HBI 5S8 . . . F 5 -222.794 219.662 421.31 1 161.01 ? HBI 5S8 1003 E 1 HETATM 57 H HBJ 5S8 . . . F 5 -221.932 222.364 421.508 1 165.63 ? HBJ 5S8 1003 E 1 HETATM 58 H HBK 5S8 . . . F 5 -223.258 221.811 420.767 1 165.63 ? HBK 5S8 1003 E 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 64 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 58 #