data_5EVY
#
_model_server_result.job_id            n7eLXISmkNYzT43UPOsKOw 
_model_server_result.datetime_utc      '2024-11-04 22:54:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5evy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    5EVY 
#
_exptl.entry_id    5EVY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5EVY 
_cell.length_a            142.33 
_cell.length_b            142.33 
_cell.length_c            62.35 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EVY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 70 n n 
PA O2A FAD sing 71 n n 
PA O5B FAD sing 72 n n 
PA O3P FAD sing 73 n n 
O2A HOA2 FAD sing 74 n n 
O5B C5B FAD sing 75 n n 
C5B C4B FAD sing 76 n n 
C5B H51A FAD sing 77 n n 
C5B H52A FAD sing 78 n n 
C4B O4B FAD sing 79 n n 
C4B C3B FAD sing 80 n n 
C4B H4B FAD sing 81 n n 
O4B C1B FAD sing 82 n n 
C3B O3B FAD sing 83 n n 
C3B C2B FAD sing 84 n n 
C3B H3B FAD sing 85 n n 
O3B HO3A FAD sing 86 n n 
C2B O2B FAD sing 87 n n 
C2B C1B FAD sing 88 n n 
C2B H2B FAD sing 89 n n 
O2B HO2A FAD sing 90 n n 
C1B N9A FAD sing 91 n n 
C1B H1B FAD sing 92 n n 
N9A C8A FAD sing 93 n y 
N9A C4A FAD sing 94 n y 
C8A N7A FAD doub 95 n y 
C8A H8A FAD sing 96 n n 
N7A C5A FAD sing 97 n y 
C5A C6A FAD sing 98 n y 
C5A C4A FAD doub 99 n y 
C6A N6A FAD sing 100 n n 
C6A N1A FAD doub 101 n y 
N6A H61A FAD sing 102 n n 
N6A H62A FAD sing 103 n n 
N1A C2A FAD sing 104 n y 
C2A N3A FAD doub 105 n y 
C2A H2A FAD sing 106 n n 
N3A C4A FAD sing 107 n y 
N1 C2 FAD sing 108 n n 
N1 C10 FAD doub 109 n n 
C2 O2 FAD doub 110 n n 
C2 N3 FAD sing 111 n n 
N3 C4 FAD sing 112 n n 
N3 HN3 FAD sing 113 n n 
C4 O4 FAD doub 114 n n 
C4 C4X FAD sing 115 n n 
C4X N5 FAD doub 116 n n 
C4X C10 FAD sing 117 n n 
N5 C5X FAD sing 118 n n 
C5X C6 FAD doub 119 n y 
C5X C9A FAD sing 120 n y 
C6 C7 FAD sing 121 n y 
C6 H6 FAD sing 122 n n 
C7 C7M FAD sing 123 n n 
C7 C8 FAD doub 124 n y 
C7M HM71 FAD sing 125 n n 
C7M HM72 FAD sing 126 n n 
C7M HM73 FAD sing 127 n n 
C8 C8M FAD sing 128 n n 
C8 C9 FAD sing 129 n y 
C8M HM81 FAD sing 130 n n 
C8M HM82 FAD sing 131 n n 
C8M HM83 FAD sing 132 n n 
C9 C9A FAD doub 133 n y 
C9 H9 FAD sing 134 n n 
C9A N10 FAD sing 135 n n 
N10 C10 FAD sing 136 n n 
N10 C1' FAD sing 137 n n 
C1' C2' FAD sing 138 n n 
C1' "H1'1" FAD sing 139 n n 
C1' "H1'2" FAD sing 140 n n 
C2' O2' FAD sing 141 n n 
C2' C3' FAD sing 142 n n 
C2' H2' FAD sing 143 n n 
O2' HO2' FAD sing 144 n n 
C3' O3' FAD sing 145 n n 
C3' C4' FAD sing 146 n n 
C3' H3' FAD sing 147 n n 
O3' HO3' FAD sing 148 n n 
C4' O4' FAD sing 149 n n 
C4' C5' FAD sing 150 n n 
C4' H4' FAD sing 151 n n 
O4' HO4' FAD sing 152 n n 
C5' O5' FAD sing 153 n n 
C5' "H5'1" FAD sing 154 n n 
C5' "H5'2" FAD sing 155 n n 
O5' P FAD sing 156 n n 
P O1P FAD doub 157 n n 
P O2P FAD sing 158 n n 
P O3P FAD sing 159 n n 
O2P HOP2 FAD sing 160 n n 
#
_atom_sites.entry_id                     5EVY 
_atom_sites.fract_transf_matrix[1][1]    0.007026 
_atom_sites.fract_transf_matrix[1][2]    0.004056 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008113 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016038 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD X 1 501 395 FAD FAD . 
C 3 SAL X 1 502 396 SAL SAL . 
D 4 HOH X 1 601 224 HOH HOH . 
D 4 HOH X 2 602 35 HOH HOH . 
D 4 HOH X 3 603 22 HOH HOH . 
D 4 HOH X 4 604 32 HOH HOH . 
D 4 HOH X 5 605 107 HOH HOH . 
D 4 HOH X 6 606 123 HOH HOH . 
D 4 HOH X 7 607 98 HOH HOH . 
D 4 HOH X 8 608 222 HOH HOH . 
D 4 HOH X 9 609 48 HOH HOH . 
D 4 HOH X 10 610 221 HOH HOH . 
D 4 HOH X 11 611 60 HOH HOH . 
D 4 HOH X 12 612 42 HOH HOH . 
D 4 HOH X 13 613 8 HOH HOH . 
D 4 HOH X 14 614 20 HOH HOH . 
D 4 HOH X 15 615 43 HOH HOH . 
D 4 HOH X 16 616 29 HOH HOH . 
D 4 HOH X 17 617 220 HOH HOH . 
D 4 HOH X 18 618 225 HOH HOH . 
D 4 HOH X 19 619 219 HOH HOH . 
D 4 HOH X 20 620 4 HOH HOH . 
D 4 HOH X 21 621 9 HOH HOH . 
D 4 HOH X 22 622 233 HOH HOH . 
D 4 HOH X 23 623 45 HOH HOH . 
D 4 HOH X 24 624 229 HOH HOH . 
D 4 HOH X 25 625 46 HOH HOH . 
D 4 HOH X 26 626 73 HOH HOH . 
D 4 HOH X 27 627 68 HOH HOH . 
D 4 HOH X 28 628 5 HOH HOH . 
D 4 HOH X 29 629 31 HOH HOH . 
D 4 HOH X 30 630 37 HOH HOH . 
D 4 HOH X 31 631 19 HOH HOH . 
D 4 HOH X 32 632 15 HOH HOH . 
D 4 HOH X 33 633 66 HOH HOH . 
D 4 HOH X 34 634 226 HOH HOH . 
D 4 HOH X 35 635 13 HOH HOH . 
D 4 HOH X 36 636 28 HOH HOH . 
D 4 HOH X 37 637 58 HOH HOH . 
D 4 HOH X 38 638 235 HOH HOH . 
D 4 HOH X 39 639 17 HOH HOH . 
D 4 HOH X 40 640 18 HOH HOH . 
D 4 HOH X 41 641 55 HOH HOH . 
D 4 HOH X 42 642 215 HOH HOH . 
D 4 HOH X 43 643 6 HOH HOH . 
D 4 HOH X 44 644 3 HOH HOH . 
D 4 HOH X 45 645 23 HOH HOH . 
D 4 HOH X 46 646 54 HOH HOH . 
D 4 HOH X 47 647 1 HOH HOH . 
D 4 HOH X 48 648 236 HOH HOH . 
D 4 HOH X 49 649 70 HOH HOH . 
D 4 HOH X 50 650 231 HOH HOH . 
D 4 HOH X 51 651 228 HOH HOH . 
D 4 HOH X 52 652 199 HOH HOH . 
D 4 HOH X 53 653 198 HOH HOH . 
D 4 HOH X 54 654 227 HOH HOH . 
D 4 HOH X 55 655 11 HOH HOH . 
D 4 HOH X 56 656 223 HOH HOH . 
D 4 HOH X 57 657 26 HOH HOH . 
D 4 HOH X 58 658 27 HOH HOH . 
D 4 HOH X 59 659 206 HOH HOH . 
D 4 HOH X 60 660 196 HOH HOH . 
D 4 HOH X 61 661 232 HOH HOH . 
D 4 HOH X 62 662 2 HOH HOH . 
D 4 HOH X 63 663 207 HOH HOH . 
D 4 HOH X 64 664 234 HOH HOH . 
D 4 HOH X 65 665 25 HOH HOH . 
D 4 HOH X 66 666 218 HOH HOH . 
D 4 HOH X 67 667 14 HOH HOH . 
D 4 HOH X 68 668 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . B 2 -40.692 52.287 -19.359 1 104.22 ? PA FAD 501 X 1 
HETATM 2 O O1A FAD . . . B 2 -41.511 53.155 -20.297 1 73.55 ? O1A FAD 501 X 1 
HETATM 3 O O2A FAD . . . B 2 -39.797 51.153 -19.83 1 126.36 ? O2A FAD 501 X 1 
HETATM 4 O O5B FAD . . . B 2 -39.638 53.296 -18.567 1 111.46 ? O5B FAD 501 X 1 
HETATM 5 C C5B FAD . . . B 2 -38.168 53.294 -18.644 1 111.12 ? C5B FAD 501 X 1 
HETATM 6 C C4B FAD . . . B 2 -37.449 54.669 -18.865 1 110.39 ? C4B FAD 501 X 1 
HETATM 7 O O4B FAD . . . B 2 -36.632 55.122 -17.747 1 112.51 ? O4B FAD 501 X 1 
HETATM 8 C C3B FAD . . . B 2 -36.468 54.614 -20.042 1 109.25 ? C3B FAD 501 X 1 
HETATM 9 O O3B FAD . . . B 2 -36.408 55.834 -20.803 1 90.57 ? O3B FAD 501 X 1 
HETATM 10 C C2B FAD . . . B 2 -35.124 54.324 -19.391 1 114.07 ? C2B FAD 501 X 1 
HETATM 11 O O2B FAD . . . B 2 -34.034 54.684 -20.275 1 103.86 ? O2B FAD 501 X 1 
HETATM 12 C C1B FAD . . . B 2 -35.213 55.04 -18.027 1 111.92 ? C1B FAD 501 X 1 
HETATM 13 N N1 FAD . . . B 2 -50.472 51.977 -20.554 1 109.7 ? N1 FAD 501 X 1 
HETATM 14 C C2 FAD . . . B 2 -51.566 51.544 -19.846 1 104.81 ? C2 FAD 501 X 1 
HETATM 15 O O2 FAD . . . B 2 -51.525 50.473 -19.155 1 72.69 ? O2 FAD 501 X 1 
HETATM 16 N N3 FAD . . . B 2 -52.71 52.265 -19.874 1 108.31 ? N3 FAD 501 X 1 
HETATM 17 C C4 FAD . . . B 2 -52.845 53.421 -20.556 1 107.2 ? C4 FAD 501 X 1 
HETATM 18 O O4 FAD . . . B 2 -53.947 54 -20.502 1 108.24 ? O4 FAD 501 X 1 
HETATM 19 C C4X FAD . . . B 2 -51.692 53.972 -21.344 1 109.15 ? C4X FAD 501 X 1 
HETATM 20 N N5 FAD . . . B 2 -51.721 55.13 -22.08 1 106.33 ? N5 FAD 501 X 1 
HETATM 21 C C5X FAD . . . B 2 -50.638 55.565 -22.792 1 114.6 ? C5X FAD 501 X 1 
HETATM 22 C C6 FAD . . . B 2 -50.715 56.747 -23.529 1 112.41 ? C6 FAD 501 X 1 
HETATM 23 C C7 FAD . . . B 2 -49.604 57.195 -24.255 1 127.22 ? C7 FAD 501 X 1 
HETATM 24 C C7M FAD . . . B 2 -49.674 58.471 -25.048 1 130.13 ? C7M FAD 501 X 1 
HETATM 25 C C8 FAD . . . B 2 -48.326 56.424 -24.25 1 135.29 ? C8 FAD 501 X 1 
HETATM 26 C C8M FAD . . . B 2 -47.122 56.912 -25.026 1 131.82 ? C8M FAD 501 X 1 
HETATM 27 C C9 FAD . . . B 2 -48.246 55.242 -23.517 1 132.57 ? C9 FAD 501 X 1 
HETATM 28 C C9A FAD . . . B 2 -49.353 54.771 -22.785 1 126.75 ? C9A FAD 501 X 1 
HETATM 29 N N10 FAD . . . B 2 -49.306 53.559 -22.019 1 126.49 ? N10 FAD 501 X 1 
HETATM 30 C C10 FAD . . . B 2 -50.459 53.137 -21.294 1 116.84 ? C10 FAD 501 X 1 
HETATM 31 C C1' FAD . . . B 2 -48.11 52.711 -21.923 1 122.14 ? C1' FAD 501 X 1 
HETATM 32 C C2' FAD . . . B 2 -47.647 52.617 -20.461 1 121.98 ? C2' FAD 501 X 1 
HETATM 33 O O2' FAD . . . B 2 -47.121 53.872 -19.987 1 118.46 ? O2' FAD 501 X 1 
HETATM 34 C C3' FAD . . . B 2 -46.625 51.493 -20.401 1 124.55 ? C3' FAD 501 X 1 
HETATM 35 O O3' FAD . . . B 2 -47.27 50.227 -20.654 1 118.34 ? O3' FAD 501 X 1 
HETATM 36 C C4' FAD . . . B 2 -45.829 51.383 -19.099 1 120.49 ? C4' FAD 501 X 1 
HETATM 37 O O4' FAD . . . B 2 -45.541 52.653 -18.466 1 125.69 ? O4' FAD 501 X 1 
HETATM 38 C C5' FAD . . . B 2 -44.557 50.661 -19.521 1 101.22 ? C5' FAD 501 X 1 
HETATM 39 O O5' FAD . . . B 2 -43.922 50.052 -18.423 1 81.04 ? O5' FAD 501 X 1 
HETATM 40 P P FAD . . . B 2 -42.357 49.953 -18.58 1 59.49 ? P FAD 501 X 1 
HETATM 41 O O1P FAD . . . B 2 -42.092 49.381 -19.924 1 65.79 ? O1P FAD 501 X 1 
HETATM 42 O O2P FAD . . . B 2 -41.913 49.187 -17.374 1 81.85 ? O2P FAD 501 X 1 
HETATM 43 O O3P FAD . . . B 2 -41.828 51.511 -18.432 1 91.36 ? O3P FAD 501 X 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           43 
#