data_5EY7
#
_model_server_result.job_id            IWm0Wxur-cSNyIEXweldkQ 
_model_server_result.datetime_utc      '2024-10-18 11:28:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ey7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5EY7 
#
_exptl.entry_id    5EY7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EY7 
_cell.length_a            107.116 
_cell.length_b            99.858 
_cell.length_c            61.548 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EY7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 260 A ASP 260 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc2 A OD2 ASP 260 A ASP 260 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? 
metalc ? metalc3 A O THR 262 A THR 262 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? 
metalc ? metalc4 A O ALA 302 A ALA 302 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
metalc ? metalc5 A O GLN 305 A GLN 305 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.153 ? 
metalc ? metalc6 A O GLY 307 A GLY 307 1_555 C NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5EY7 
_atom_sites.fract_transf_matrix[1][1]    0.009336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010014 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016247 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 401 1 NA NA . 
D 3 HOH A 1 501 46 HOH HOH . 
D 3 HOH A 2 502 80 HOH HOH . 
D 3 HOH A 3 503 64 HOH HOH . 
D 3 HOH A 4 504 22 HOH HOH . 
D 3 HOH A 5 505 63 HOH HOH . 
D 3 HOH A 6 506 71 HOH HOH . 
D 3 HOH A 7 507 33 HOH HOH . 
D 3 HOH A 8 508 10 HOH HOH . 
D 3 HOH A 9 509 50 HOH HOH . 
D 3 HOH A 10 510 3 HOH HOH . 
D 3 HOH A 11 511 5 HOH HOH . 
D 3 HOH A 12 512 83 HOH HOH . 
D 3 HOH A 13 513 4 HOH HOH . 
D 3 HOH A 14 514 49 HOH HOH . 
D 3 HOH A 15 515 9 HOH HOH . 
D 3 HOH A 16 516 12 HOH HOH . 
D 3 HOH A 17 517 15 HOH HOH . 
D 3 HOH A 18 518 23 HOH HOH . 
D 3 HOH A 19 519 48 HOH HOH . 
D 3 HOH A 20 520 60 HOH HOH . 
D 3 HOH A 21 521 38 HOH HOH . 
D 3 HOH A 22 522 43 HOH HOH . 
D 3 HOH A 23 523 21 HOH HOH . 
D 3 HOH A 24 524 13 HOH HOH . 
D 3 HOH A 25 525 25 HOH HOH . 
D 3 HOH A 26 526 57 HOH HOH . 
D 3 HOH A 27 527 44 HOH HOH . 
D 3 HOH A 28 528 68 HOH HOH . 
D 3 HOH A 29 529 18 HOH HOH . 
D 3 HOH A 30 530 78 HOH HOH . 
D 3 HOH A 31 531 67 HOH HOH . 
D 3 HOH A 32 532 19 HOH HOH . 
D 3 HOH A 33 533 52 HOH HOH . 
D 3 HOH A 34 534 20 HOH HOH . 
D 3 HOH A 35 535 65 HOH HOH . 
D 3 HOH A 36 536 55 HOH HOH . 
D 3 HOH A 37 537 24 HOH HOH . 
D 3 HOH A 38 538 82 HOH HOH . 
D 3 HOH A 39 539 72 HOH HOH . 
D 3 HOH A 40 540 56 HOH HOH . 
D 3 HOH A 41 541 32 HOH HOH . 
D 3 HOH A 42 542 42 HOH HOH . 
D 3 HOH A 43 543 81 HOH HOH . 
D 3 HOH A 44 544 70 HOH HOH . 
D 3 HOH A 45 545 74 HOH HOH . 
D 3 HOH A 46 546 62 HOH HOH . 
D 3 HOH A 47 547 2 HOH HOH . 
E 3 HOH B 1 401 6 HOH HOH . 
E 3 HOH B 2 402 7 HOH HOH . 
E 3 HOH B 3 403 59 HOH HOH . 
E 3 HOH B 4 404 14 HOH HOH . 
E 3 HOH B 5 405 76 HOH HOH . 
E 3 HOH B 6 406 31 HOH HOH . 
E 3 HOH B 7 407 8 HOH HOH . 
E 3 HOH B 8 408 11 HOH HOH . 
E 3 HOH B 9 409 35 HOH HOH . 
E 3 HOH B 10 410 27 HOH HOH . 
E 3 HOH B 11 411 37 HOH HOH . 
E 3 HOH B 12 412 30 HOH HOH . 
E 3 HOH B 13 413 69 HOH HOH . 
E 3 HOH B 14 414 16 HOH HOH . 
E 3 HOH B 15 415 29 HOH HOH . 
E 3 HOH B 16 416 53 HOH HOH . 
E 3 HOH B 17 417 26 HOH HOH . 
E 3 HOH B 18 418 34 HOH HOH . 
E 3 HOH B 19 419 61 HOH HOH . 
E 3 HOH B 20 420 77 HOH HOH . 
E 3 HOH B 21 421 36 HOH HOH . 
E 3 HOH B 22 422 58 HOH HOH . 
E 3 HOH B 23 423 17 HOH HOH . 
E 3 HOH B 24 424 79 HOH HOH . 
E 3 HOH B 25 425 51 HOH HOH . 
E 3 HOH B 26 426 66 HOH HOH . 
E 3 HOH B 27 427 41 HOH HOH . 
E 3 HOH B 28 428 28 HOH HOH . 
E 3 HOH B 29 429 39 HOH HOH . 
E 3 HOH B 30 430 47 HOH HOH . 
E 3 HOH B 31 431 73 HOH HOH . 
E 3 HOH B 32 432 75 HOH HOH . 
E 3 HOH B 33 433 45 HOH HOH . 
E 3 HOH B 34 434 54 HOH HOH . 
E 3 HOH B 35 435 40 HOH HOH . 
E 3 HOH B 36 436 1 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               5.264 
_atom_site.Cartn_y               18.506 
_atom_site.Cartn_z               -26.086 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        79.79 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#