data_5EZ1 # _model_server_result.job_id VFS3yRWbXUrCbFuc_Dd9wg _model_server_result.datetime_utc '2024-11-24 14:41:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ez1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 5EZ1 # _exptl.entry_id 5EZ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 161.157 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1H-indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5EZ1 _cell.length_a 61.998 _cell.length_b 61.998 _cell.length_c 366.427 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EZ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C9 H7 N O2' _chem_comp.formula_weight 161.157 _chem_comp.id ICB _chem_comp.mon_nstd_flag . _chem_comp.name '1H-indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C03 ICB doub 139 n y C02 C01 ICB sing 140 n y C03 C04 ICB sing 141 n y C01 C06 ICB doub 142 n y C04 N09 ICB sing 143 n y C04 C05 ICB doub 144 n y N09 C08 ICB sing 145 n y C06 C05 ICB sing 146 n y C05 C07 ICB sing 147 n y C08 C07 ICB doub 148 n y C08 C10 ICB sing 149 n n O11 C10 ICB doub 150 n n C10 O12 ICB sing 151 n n C01 H1 ICB sing 152 n n C02 H2 ICB sing 153 n n C03 H3 ICB sing 154 n n C06 H4 ICB sing 155 n n C07 H5 ICB sing 156 n n N09 H6 ICB sing 157 n n O12 H7 ICB sing 158 n n # _atom_sites.entry_id 5EZ1 _atom_sites.fract_transf_matrix[1][1] 0.01613 _atom_sites.fract_transf_matrix[1][2] 0.009312 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ICB A 1 401 302 ICB LIG . D 2 ICB B 1 401 301 ICB LIG . E 3 HOH A 1 501 38 HOH HOH . E 3 HOH A 2 502 100 HOH HOH . E 3 HOH A 3 503 62 HOH HOH . E 3 HOH A 4 504 48 HOH HOH . E 3 HOH A 5 505 31 HOH HOH . E 3 HOH A 6 506 45 HOH HOH . E 3 HOH A 7 507 24 HOH HOH . E 3 HOH A 8 508 51 HOH HOH . E 3 HOH A 9 509 76 HOH HOH . E 3 HOH A 10 510 20 HOH HOH . E 3 HOH A 11 511 69 HOH HOH . E 3 HOH A 12 512 17 HOH HOH . E 3 HOH A 13 513 34 HOH HOH . E 3 HOH A 14 514 93 HOH HOH . E 3 HOH A 15 515 64 HOH HOH . E 3 HOH A 16 516 50 HOH HOH . E 3 HOH A 17 517 54 HOH HOH . E 3 HOH A 18 518 33 HOH HOH . E 3 HOH A 19 519 129 HOH HOH . E 3 HOH A 20 520 140 HOH HOH . E 3 HOH A 21 521 35 HOH HOH . E 3 HOH A 22 522 114 HOH HOH . E 3 HOH A 23 523 39 HOH HOH . E 3 HOH A 24 524 3 HOH HOH . E 3 HOH A 25 525 1 HOH HOH . E 3 HOH A 26 526 133 HOH HOH . E 3 HOH A 27 527 6 HOH HOH . E 3 HOH A 28 528 5 HOH HOH . E 3 HOH A 29 529 122 HOH HOH . E 3 HOH A 30 530 103 HOH HOH . E 3 HOH A 31 531 4 HOH HOH . E 3 HOH A 32 532 87 HOH HOH . E 3 HOH A 33 533 138 HOH HOH . E 3 HOH A 34 534 61 HOH HOH . E 3 HOH A 35 535 77 HOH HOH . E 3 HOH A 36 536 13 HOH HOH . E 3 HOH A 37 537 22 HOH HOH . E 3 HOH A 38 538 109 HOH HOH . E 3 HOH A 39 539 146 HOH HOH . E 3 HOH A 40 540 46 HOH HOH . E 3 HOH A 41 541 95 HOH HOH . E 3 HOH A 42 542 43 HOH HOH . E 3 HOH A 43 543 72 HOH HOH . E 3 HOH A 44 544 75 HOH HOH . E 3 HOH A 45 545 8 HOH HOH . E 3 HOH A 46 546 30 HOH HOH . E 3 HOH A 47 547 59 HOH HOH . E 3 HOH A 48 548 49 HOH HOH . E 3 HOH A 49 549 120 HOH HOH . E 3 HOH A 50 550 47 HOH HOH . E 3 HOH A 51 551 29 HOH HOH . E 3 HOH A 52 552 70 HOH HOH . E 3 HOH A 53 553 7 HOH HOH . E 3 HOH A 54 554 42 HOH HOH . E 3 HOH A 55 555 79 HOH HOH . E 3 HOH A 56 556 126 HOH HOH . E 3 HOH A 57 557 106 HOH HOH . E 3 HOH A 58 558 25 HOH HOH . E 3 HOH A 59 559 28 HOH HOH . E 3 HOH A 60 560 26 HOH HOH . E 3 HOH A 61 561 110 HOH HOH . E 3 HOH A 62 562 80 HOH HOH . E 3 HOH A 63 563 92 HOH HOH . E 3 HOH A 64 564 118 HOH HOH . E 3 HOH A 65 565 65 HOH HOH . E 3 HOH A 66 566 137 HOH HOH . E 3 HOH A 67 567 9 HOH HOH . E 3 HOH A 68 568 123 HOH HOH . E 3 HOH A 69 569 94 HOH HOH . E 3 HOH A 70 570 111 HOH HOH . E 3 HOH A 71 571 97 HOH HOH . E 3 HOH A 72 572 116 HOH HOH . E 3 HOH A 73 573 119 HOH HOH . E 3 HOH A 74 574 147 HOH HOH . E 3 HOH A 75 575 74 HOH HOH . E 3 HOH A 76 576 66 HOH HOH . E 3 HOH A 77 577 135 HOH HOH . E 3 HOH A 78 578 90 HOH HOH . F 3 HOH B 1 501 2 HOH HOH . F 3 HOH B 2 502 37 HOH HOH . F 3 HOH B 3 503 23 HOH HOH . F 3 HOH B 4 504 99 HOH HOH . F 3 HOH B 5 505 105 HOH HOH . F 3 HOH B 6 506 15 HOH HOH . F 3 HOH B 7 507 53 HOH HOH . F 3 HOH B 8 508 55 HOH HOH . F 3 HOH B 9 509 36 HOH HOH . F 3 HOH B 10 510 84 HOH HOH . F 3 HOH B 11 511 44 HOH HOH . F 3 HOH B 12 512 21 HOH HOH . F 3 HOH B 13 513 132 HOH HOH . F 3 HOH B 14 514 139 HOH HOH . F 3 HOH B 15 515 12 HOH HOH . F 3 HOH B 16 516 58 HOH HOH . F 3 HOH B 17 517 73 HOH HOH . F 3 HOH B 18 518 57 HOH HOH . F 3 HOH B 19 519 78 HOH HOH . F 3 HOH B 20 520 71 HOH HOH . F 3 HOH B 21 521 40 HOH HOH . F 3 HOH B 22 522 18 HOH HOH . F 3 HOH B 23 523 128 HOH HOH . F 3 HOH B 24 524 145 HOH HOH . F 3 HOH B 25 525 124 HOH HOH . F 3 HOH B 26 526 16 HOH HOH . F 3 HOH B 27 527 108 HOH HOH . F 3 HOH B 28 528 32 HOH HOH . F 3 HOH B 29 529 149 HOH HOH . F 3 HOH B 30 530 148 HOH HOH . F 3 HOH B 31 531 89 HOH HOH . F 3 HOH B 32 532 83 HOH HOH . F 3 HOH B 33 533 127 HOH HOH . F 3 HOH B 34 534 68 HOH HOH . F 3 HOH B 35 535 11 HOH HOH . F 3 HOH B 36 536 82 HOH HOH . F 3 HOH B 37 537 27 HOH HOH . F 3 HOH B 38 538 14 HOH HOH . F 3 HOH B 39 539 143 HOH HOH . F 3 HOH B 40 540 81 HOH HOH . F 3 HOH B 41 541 56 HOH HOH . F 3 HOH B 42 542 60 HOH HOH . F 3 HOH B 43 543 98 HOH HOH . F 3 HOH B 44 544 96 HOH HOH . F 3 HOH B 45 545 86 HOH HOH . F 3 HOH B 46 546 88 HOH HOH . F 3 HOH B 47 547 67 HOH HOH . F 3 HOH B 48 548 10 HOH HOH . F 3 HOH B 49 549 131 HOH HOH . F 3 HOH B 50 550 41 HOH HOH . F 3 HOH B 51 551 144 HOH HOH . F 3 HOH B 52 552 85 HOH HOH . F 3 HOH B 53 553 63 HOH HOH . F 3 HOH B 54 554 19 HOH HOH . F 3 HOH B 55 555 125 HOH HOH . F 3 HOH B 56 556 91 HOH HOH . F 3 HOH B 57 557 52 HOH HOH . F 3 HOH B 58 558 134 HOH HOH . F 3 HOH B 59 559 150 HOH HOH . F 3 HOH B 60 560 121 HOH HOH . F 3 HOH B 61 561 115 HOH HOH . F 3 HOH B 62 562 104 HOH HOH . F 3 HOH B 63 563 130 HOH HOH . F 3 HOH B 64 564 107 HOH HOH . F 3 HOH B 65 565 113 HOH HOH . F 3 HOH B 66 566 151 HOH HOH . F 3 HOH B 67 567 136 HOH HOH . F 3 HOH B 68 568 101 HOH HOH . F 3 HOH B 69 569 112 HOH HOH . F 3 HOH B 70 570 141 HOH HOH . F 3 HOH B 71 571 117 HOH HOH . F 3 HOH B 72 572 142 HOH HOH . F 3 HOH B 73 573 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 ICB . . . D 2 9.746 32.954 15.934 1 100.75 ? C10 ICB 401 B 1 HETATM 2 C C01 ICB . . . D 2 3.7 32.354 15.772 1 88.06 ? C01 ICB 401 B 1 HETATM 3 C C02 ICB . . . D 2 4.015 31.363 14.847 1 93.18 ? C02 ICB 401 B 1 HETATM 4 C C03 ICB . . . D 2 5.346 31.112 14.541 1 78.52 ? C03 ICB 401 B 1 HETATM 5 C C04 ICB . . . D 2 6.366 31.862 15.156 1 103.87 ? C04 ICB 401 B 1 HETATM 6 C C05 ICB . . . D 2 6.048 32.854 16.068 1 98.69 ? C05 ICB 401 B 1 HETATM 7 C C06 ICB . . . D 2 4.697 33.107 16.376 1 81.58 ? C06 ICB 401 B 1 HETATM 8 C C07 ICB . . . D 2 7.283 33.414 16.496 1 91.19 ? C07 ICB 401 B 1 HETATM 9 C C08 ICB . . . D 2 8.285 32.722 15.82 1 92.48 ? C08 ICB 401 B 1 HETATM 10 N N09 ICB . . . D 2 7.717 31.806 15.028 1 97.76 ? N09 ICB 401 B 1 HETATM 11 O O11 ICB . . . D 2 10.431 33.055 14.882 1 120.53 ? O11 ICB 401 B 1 HETATM 12 O O12 ICB . . . D 2 10.283 33.045 17.074 1 114.32 ? O12 ICB 401 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #