data_5EZ6 # _model_server_result.job_id TC-6DbR0Md4m1zA_NcYZ6w _model_server_result.datetime_utc '2024-11-16 23:37:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ez6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5EZ6 # _exptl.entry_id 5EZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5EZ6 _cell.length_a 91.407 _cell.length_b 91.407 _cell.length_c 56.202 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 17 B GLY 17 1_555 D MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc2 A O VAL 38 B VAL 38 1_555 B MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc3 A O GLU 40 B GLU 40 1_555 B MG MG . B MG 201 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc4 A O CYS 83 B CYS 83 1_555 C MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc5 A O SER 91 B SER 91 1_555 C MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc6 D MG MG . B MG 203 1_555 F O HOH . B HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5EZ6 _atom_sites.fract_transf_matrix[1][1] 0.01094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG B 1 201 1 MG MG . C 2 MG B 1 202 2 MG MG . D 2 MG B 1 203 3 MG MG . E 3 GDP B 1 204 1 GDP GDP . F 4 HOH B 1 301 22 HOH HOH . F 4 HOH B 2 302 64 HOH HOH . F 4 HOH B 3 303 52 HOH HOH . F 4 HOH B 4 304 39 HOH HOH . F 4 HOH B 5 305 31 HOH HOH . F 4 HOH B 6 306 23 HOH HOH . F 4 HOH B 7 307 5 HOH HOH . F 4 HOH B 8 308 58 HOH HOH . F 4 HOH B 9 309 30 HOH HOH . F 4 HOH B 10 310 49 HOH HOH . F 4 HOH B 11 311 3 HOH HOH . F 4 HOH B 12 312 19 HOH HOH . F 4 HOH B 13 313 72 HOH HOH . F 4 HOH B 14 314 66 HOH HOH . F 4 HOH B 15 315 57 HOH HOH . F 4 HOH B 16 316 32 HOH HOH . F 4 HOH B 17 317 25 HOH HOH . F 4 HOH B 18 318 40 HOH HOH . F 4 HOH B 19 319 65 HOH HOH . F 4 HOH B 20 320 20 HOH HOH . F 4 HOH B 21 321 42 HOH HOH . F 4 HOH B 22 322 41 HOH HOH . F 4 HOH B 23 323 14 HOH HOH . F 4 HOH B 24 324 43 HOH HOH . F 4 HOH B 25 325 34 HOH HOH . F 4 HOH B 26 326 4 HOH HOH . F 4 HOH B 27 327 47 HOH HOH . F 4 HOH B 28 328 18 HOH HOH . F 4 HOH B 29 329 15 HOH HOH . F 4 HOH B 30 330 27 HOH HOH . F 4 HOH B 31 331 56 HOH HOH . F 4 HOH B 32 332 9 HOH HOH . F 4 HOH B 33 333 16 HOH HOH . F 4 HOH B 34 334 54 HOH HOH . F 4 HOH B 35 335 17 HOH HOH . F 4 HOH B 36 336 33 HOH HOH . F 4 HOH B 37 337 10 HOH HOH . F 4 HOH B 38 338 13 HOH HOH . F 4 HOH B 39 339 46 HOH HOH . F 4 HOH B 40 340 53 HOH HOH . F 4 HOH B 41 341 28 HOH HOH . F 4 HOH B 42 342 35 HOH HOH . F 4 HOH B 43 343 6 HOH HOH . F 4 HOH B 44 344 37 HOH HOH . F 4 HOH B 45 345 51 HOH HOH . F 4 HOH B 46 346 67 HOH HOH . F 4 HOH B 47 347 24 HOH HOH . F 4 HOH B 48 348 62 HOH HOH . F 4 HOH B 49 349 21 HOH HOH . F 4 HOH B 50 350 29 HOH HOH . F 4 HOH B 51 351 11 HOH HOH . F 4 HOH B 52 352 7 HOH HOH . F 4 HOH B 53 353 38 HOH HOH . F 4 HOH B 54 354 44 HOH HOH . F 4 HOH B 55 355 68 HOH HOH . F 4 HOH B 56 356 36 HOH HOH . F 4 HOH B 57 357 2 HOH HOH . F 4 HOH B 58 358 50 HOH HOH . F 4 HOH B 59 359 1 HOH HOH . F 4 HOH B 60 360 74 HOH HOH . F 4 HOH B 61 361 59 HOH HOH . F 4 HOH B 62 362 70 HOH HOH . F 4 HOH B 63 363 48 HOH HOH . F 4 HOH B 64 364 61 HOH HOH . F 4 HOH B 65 365 55 HOH HOH . F 4 HOH B 66 366 73 HOH HOH . F 4 HOH B 67 367 8 HOH HOH . F 4 HOH B 68 368 60 HOH HOH . F 4 HOH B 69 369 63 HOH HOH . F 4 HOH B 70 370 71 HOH HOH . F 4 HOH B 71 371 69 HOH HOH . F 4 HOH B 72 372 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.889 _atom_site.Cartn_y 0.462 _atom_site.Cartn_z 4.094 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #