data_5EZD
#
_model_server_result.job_id            PxueMR3kJ54vSlMXl2zJlA 
_model_server_result.datetime_utc      '2024-12-26 22:30:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ezd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":402}' 
#
_entry.id    5EZD 
#
_exptl.entry_id    5EZD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EZD 
_cell.length_a            57.65 
_cell.length_b            75.14 
_cell.length_c            75.26 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EZD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G 1 1 
B,D,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 85 A CYS 250 1_555 A SG CYS 135 A CYS 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 94 A CYS 259 1_555 A SG CYS 118 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf3 A SG CYS 110 A CYS 275 1_555 A SG CYS 131 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf4 B SG CYS 85 B CYS 250 1_555 B SG CYS 135 B CYS 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf5 B SG CYS 94 B CYS 259 1_555 B SG CYS 118 B CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf6 B SG CYS 110 B CYS 275 1_555 B SG CYS 131 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc1 A OE1 GLU 129 A GLU 294 1_555 C K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.091 ? 
metalc ? metalc2 C K K . A K 401 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.131 ? 
metalc ? metalc3 C K K . A K 401 1_555 G O HOH . A HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? 
metalc ? metalc4 B OE1 GLU 129 B GLU 294 1_555 F K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.106 ? 
metalc ? metalc5 F K K . B K 403 1_555 H O HOH . B HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? 
metalc ? metalc6 F K K . B K 403 1_555 H O HOH . B HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? 
metalc ? metalc7 F K K . B K 403 1_555 H O HOH . B HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     5EZD 
_atom_sites.fract_transf_matrix[1][1]    0.017346 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013308 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013287 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 K A 1 401 1 K K . 
D 3 ACT B 1 401 1 ACT ACT . 
E 3 ACT B 1 402 2 ACT ACT . 
F 2 K B 1 403 2 K K . 
G 4 HOH A 1 501 67 HOH HOH . 
G 4 HOH A 2 502 49 HOH HOH . 
G 4 HOH A 3 503 7 HOH HOH . 
G 4 HOH A 4 504 2 HOH HOH . 
G 4 HOH A 5 505 46 HOH HOH . 
G 4 HOH A 6 506 68 HOH HOH . 
G 4 HOH A 7 507 59 HOH HOH . 
G 4 HOH A 8 508 37 HOH HOH . 
G 4 HOH A 9 509 11 HOH HOH . 
G 4 HOH A 10 510 43 HOH HOH . 
G 4 HOH A 11 511 1 HOH HOH . 
G 4 HOH A 12 512 16 HOH HOH . 
G 4 HOH A 13 513 47 HOH HOH . 
G 4 HOH A 14 514 60 HOH HOH . 
G 4 HOH A 15 515 9 HOH HOH . 
G 4 HOH A 16 516 10 HOH HOH . 
G 4 HOH A 17 517 57 HOH HOH . 
G 4 HOH A 18 518 44 HOH HOH . 
G 4 HOH A 19 519 24 HOH HOH . 
G 4 HOH A 20 520 58 HOH HOH . 
G 4 HOH A 21 521 33 HOH HOH . 
G 4 HOH A 22 522 20 HOH HOH . 
G 4 HOH A 23 523 18 HOH HOH . 
G 4 HOH A 24 524 63 HOH HOH . 
G 4 HOH A 25 525 32 HOH HOH . 
G 4 HOH A 26 526 26 HOH HOH . 
G 4 HOH A 27 527 45 HOH HOH . 
G 4 HOH A 28 528 35 HOH HOH . 
G 4 HOH A 29 529 36 HOH HOH . 
G 4 HOH A 30 530 42 HOH HOH . 
H 4 HOH B 1 501 55 HOH HOH . 
H 4 HOH B 2 502 66 HOH HOH . 
H 4 HOH B 3 503 3 HOH HOH . 
H 4 HOH B 4 504 13 HOH HOH . 
H 4 HOH B 5 505 54 HOH HOH . 
H 4 HOH B 6 506 39 HOH HOH . 
H 4 HOH B 7 507 28 HOH HOH . 
H 4 HOH B 8 508 19 HOH HOH . 
H 4 HOH B 9 509 50 HOH HOH . 
H 4 HOH B 10 510 48 HOH HOH . 
H 4 HOH B 11 511 21 HOH HOH . 
H 4 HOH B 12 512 53 HOH HOH . 
H 4 HOH B 13 513 6 HOH HOH . 
H 4 HOH B 14 514 8 HOH HOH . 
H 4 HOH B 15 515 5 HOH HOH . 
H 4 HOH B 16 516 4 HOH HOH . 
H 4 HOH B 17 517 27 HOH HOH . 
H 4 HOH B 18 518 61 HOH HOH . 
H 4 HOH B 19 519 25 HOH HOH . 
H 4 HOH B 20 520 15 HOH HOH . 
H 4 HOH B 21 521 14 HOH HOH . 
H 4 HOH B 22 522 17 HOH HOH . 
H 4 HOH B 23 523 31 HOH HOH . 
H 4 HOH B 24 524 30 HOH HOH . 
H 4 HOH B 25 525 65 HOH HOH . 
H 4 HOH B 26 526 62 HOH HOH . 
H 4 HOH B 27 527 64 HOH HOH . 
H 4 HOH B 28 528 29 HOH HOH . 
H 4 HOH B 29 529 52 HOH HOH . 
H 4 HOH B 30 530 51 HOH HOH . 
H 4 HOH B 31 531 34 HOH HOH . 
H 4 HOH B 32 532 40 HOH HOH . 
H 4 HOH B 33 533 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . E 3 -2.798 16.441 30.988 1 91.29 ? C ACT 402 B 1 
HETATM 2 O O ACT . . . E 3 -2.636 17.493 30.318 1 73.03 ? O ACT 402 B 1 
HETATM 3 O OXT ACT . . . E 3 -1.853 15.612 30.976 1 86.79 ? OXT ACT 402 B 1 
HETATM 4 C CH3 ACT . . . E 3 -4.06 16.18 31.761 1 95.18 ? CH3 ACT 402 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#