data_5F0K # _model_server_result.job_id 0gr411eNeupuYzdoiM1-PQ _model_server_result.datetime_utc '2025-04-28 02:02:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":504}' # _entry.id 5F0K # _exptl.entry_id 5F0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 125.5 _cell.angle_gamma 90 _cell.entry_id 5F0K _cell.length_a 200.7 _cell.length_b 108.6 _cell.length_c 167.9 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G,H,I,J,K,L,GA 1 1 B,M,N,O,P,Q,R,HA 2 1 C,S,T,U,V 3 1 D,W,X,Y,Z,AA 4 1 E,BA,CA,DA,EA,FA,IA 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id V _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 259 n n O1 HO1 PG4 sing 260 n n C1 C2 PG4 sing 261 n n C1 H11 PG4 sing 262 n n C1 H12 PG4 sing 263 n n C2 O2 PG4 sing 264 n n C2 H21 PG4 sing 265 n n C2 H22 PG4 sing 266 n n O2 C3 PG4 sing 267 n n C3 C4 PG4 sing 268 n n C3 H31 PG4 sing 269 n n C3 H32 PG4 sing 270 n n C4 O3 PG4 sing 271 n n C4 H41 PG4 sing 272 n n C4 H42 PG4 sing 273 n n O3 C5 PG4 sing 274 n n C5 C6 PG4 sing 275 n n C5 H51 PG4 sing 276 n n C5 H52 PG4 sing 277 n n C6 O4 PG4 sing 278 n n C6 H61 PG4 sing 279 n n C6 H62 PG4 sing 280 n n O4 C7 PG4 sing 281 n n C7 C8 PG4 sing 282 n n C7 H71 PG4 sing 283 n n C7 H72 PG4 sing 284 n n C8 O5 PG4 sing 285 n n C8 H81 PG4 sing 286 n n C8 H82 PG4 sing 287 n n O5 HO5 PG4 sing 288 n n # _atom_sites.entry_id 5F0K _atom_sites.fract_transf_matrix[1][1] 0.004983 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003554 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 EDO A 1 501 7 EDO EDO . G 2 EDO A 1 502 9 EDO EDO . H 2 EDO A 1 503 12 EDO EDO . I 2 EDO A 1 504 13 EDO EDO . J 2 EDO A 1 505 14 EDO EDO . K 3 GOL A 1 506 9 GOL GOL . L 4 SO4 A 1 507 1 SO4 SO4 . M 2 EDO B 1 501 6 EDO EDO . N 2 EDO B 1 502 15 EDO EDO . O 3 GOL B 1 503 1 GOL GOL . P 3 GOL B 1 504 3 GOL GOL . Q 3 GOL B 1 505 7 GOL GOL . R 4 SO4 B 1 506 2 SO4 SO4 . S 2 EDO C 1 501 1 EDO EDO . T 2 EDO C 1 502 10 EDO EDO . U 3 GOL C 1 503 5 GOL GOL . V 5 PG4 C 1 504 1 PG4 PG4 . W 2 EDO D 1 501 2 EDO EDO . X 2 EDO D 1 502 3 EDO EDO . Y 2 EDO D 1 503 4 EDO EDO . Z 3 GOL D 1 504 4 GOL GOL . AA 3 GOL D 1 505 6 GOL GOL . BA 2 EDO E 1 501 5 EDO EDO . CA 2 EDO E 1 502 8 EDO EDO . DA 3 GOL E 1 503 2 GOL GOL . EA 3 GOL E 1 504 8 GOL GOL . FA 4 SO4 E 1 505 3 SO4 SO4 . GA 6 HOH A 1 601 9 HOH HOH . GA 6 HOH A 2 602 17 HOH HOH . GA 6 HOH A 3 603 10 HOH HOH . GA 6 HOH A 4 604 1 HOH HOH . GA 6 HOH A 5 605 3 HOH HOH . GA 6 HOH A 6 606 8 HOH HOH . GA 6 HOH A 7 607 5 HOH HOH . HA 6 HOH B 1 601 12 HOH HOH . HA 6 HOH B 2 602 7 HOH HOH . HA 6 HOH B 3 603 16 HOH HOH . HA 6 HOH B 4 604 2 HOH HOH . HA 6 HOH B 5 605 18 HOH HOH . HA 6 HOH B 6 606 11 HOH HOH . HA 6 HOH B 7 607 15 HOH HOH . IA 6 HOH E 1 601 6 HOH HOH . IA 6 HOH E 2 602 4 HOH HOH . IA 6 HOH E 3 603 14 HOH HOH . IA 6 HOH E 4 604 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . V 5 25.78 -27.027 37.472 1 48.81 ? O1 PG4 504 C 1 HETATM 2 C C1 PG4 . . . V 5 26.684 -27.288 36.392 1 72.04 ? C1 PG4 504 C 1 HETATM 3 C C2 PG4 . . . V 5 26.008 -26.97 35.065 1 62.01 ? C2 PG4 504 C 1 HETATM 4 O O2 PG4 . . . V 5 26.735 -27.584 34.002 1 72.36 ? O2 PG4 504 C 1 HETATM 5 C C3 PG4 . . . V 5 26.154 -27.269 32.741 1 67.79 ? C3 PG4 504 C 1 HETATM 6 C C4 PG4 . . . V 5 26.365 -28.403 31.748 1 69.15 ? C4 PG4 504 C 1 HETATM 7 O O3 PG4 . . . V 5 27.516 -28.16 30.944 1 55.47 ? O3 PG4 504 C 1 HETATM 8 C C5 PG4 . . . V 5 27.485 -28.982 29.78 1 57.1 ? C5 PG4 504 C 1 HETATM 9 C C6 PG4 . . . V 5 28.716 -28.731 28.92 1 70.21 ? C6 PG4 504 C 1 HETATM 10 O O4 PG4 . . . V 5 29.803 -29.519 29.391 1 79.75 ? O4 PG4 504 C 1 HETATM 11 C C7 PG4 . . . V 5 30.856 -29.562 28.433 1 60.18 ? C7 PG4 504 C 1 HETATM 12 C C8 PG4 . . . V 5 32.086 -30.193 29.069 1 60.74 ? C8 PG4 504 C 1 HETATM 13 O O5 PG4 . . . V 5 32.267 -29.649 30.382 1 79.39 ? O5 PG4 504 C 1 HETATM 14 H HO1 PG4 . . . V 5 26.215 -27.23 38.312 1 58.57 ? HO1 PG4 504 C 1 HETATM 15 H H11 PG4 . . . V 5 26.986 -28.337 36.409 1 86.45 ? H11 PG4 504 C 1 HETATM 16 H H12 PG4 . . . V 5 27.58 -26.674 36.506 1 86.45 ? H12 PG4 504 C 1 HETATM 17 H H21 PG4 . . . V 5 25.977 -25.888 34.916 1 74.41 ? H21 PG4 504 C 1 HETATM 18 H H22 PG4 . . . V 5 24.981 -27.342 35.075 1 74.41 ? H22 PG4 504 C 1 HETATM 19 H H31 PG4 . . . V 5 25.084 -27.089 32.867 1 81.35 ? H31 PG4 504 C 1 HETATM 20 H H32 PG4 . . . V 5 26.605 -26.354 32.351 1 81.35 ? H32 PG4 504 C 1 HETATM 21 H H41 PG4 . . . V 5 25.485 -28.496 31.107 1 82.98 ? H41 PG4 504 C 1 HETATM 22 H H42 PG4 . . . V 5 26.489 -29.344 32.288 1 82.98 ? H42 PG4 504 C 1 HETATM 23 H H51 PG4 . . . V 5 26.584 -28.764 29.202 1 68.51 ? H51 PG4 504 C 1 HETATM 24 H H52 PG4 . . . V 5 27.452 -30.033 30.074 1 68.51 ? H52 PG4 504 C 1 HETATM 25 H H61 PG4 . . . V 5 28.498 -28.988 27.881 1 84.25 ? H61 PG4 504 C 1 HETATM 26 H H62 PG4 . . . V 5 28.983 -27.673 28.959 1 84.25 ? H62 PG4 504 C 1 HETATM 27 H H71 PG4 . . . V 5 30.545 -30.149 27.566 1 72.22 ? H71 PG4 504 C 1 HETATM 28 H H72 PG4 . . . V 5 31.091 -28.55 28.095 1 72.22 ? H72 PG4 504 C 1 HETATM 29 H H81 PG4 . . . V 5 32.967 -29.986 28.458 1 72.88 ? H81 PG4 504 C 1 HETATM 30 H H82 PG4 . . . V 5 31.957 -31.275 29.131 1 72.88 ? H82 PG4 504 C 1 HETATM 31 H HO5 PG4 . . . V 5 33.048 -30.047 30.791 1 95.27 ? HO5 PG4 504 C 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #