data_5F0U # _model_server_result.job_id S4RhOJv6k0eAmw5POhH3ng _model_server_result.datetime_utc '2025-03-05 02:25:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":104}' # _entry.id 5F0U # _exptl.entry_id 5F0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 107.868 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SILVER ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5F0U _cell.length_a 37.095 _cell.length_b 37.095 _cell.length_c 170.032 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 11 A CYS 11 1_555 C AG AG . A AG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc2 A SG CYS 11 A CYS 11 1_555 D AG AG . A AG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc3 A SG CYS 14 A CYS 14 1_555 B AG AG . A AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc4 A SG CYS 14 A CYS 14 1_555 C AG AG . A AG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc5 A NZ LYS 19 A LYS 19 1_555 E AG AG . A AG 104 8_555 ? B ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc6 B AG AG . A AG 101 1_555 G O HOH . A HOH 207 8_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? # _chem_comp.formula 'Ag 1' _chem_comp.formula_weight 107.868 _chem_comp.id AG _chem_comp.mon_nstd_flag . _chem_comp.name 'SILVER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5F0U _atom_sites.fract_transf_matrix[1][1] 0.026958 _atom_sites.fract_transf_matrix[1][2] 0.015564 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AG A 1 101 1 AG AG . C 2 AG A 1 102 2 AG AG . D 2 AG A 1 103 3 AG AG . E 2 AG A 1 104 4 AG AG . F 2 AG A 1 105 5 AG AG . G 3 HOH A 1 201 35 HOH HOH . G 3 HOH A 2 202 22 HOH HOH . G 3 HOH A 3 203 15 HOH HOH . G 3 HOH A 4 204 7 HOH HOH . G 3 HOH A 5 205 17 HOH HOH . G 3 HOH A 6 206 1 HOH HOH . G 3 HOH A 7 207 31 HOH HOH . G 3 HOH A 8 208 16 HOH HOH . G 3 HOH A 9 209 6 HOH HOH . G 3 HOH A 10 210 30 HOH HOH . G 3 HOH A 11 211 26 HOH HOH . G 3 HOH A 12 212 18 HOH HOH . G 3 HOH A 13 213 10 HOH HOH . G 3 HOH A 14 214 40 HOH HOH . G 3 HOH A 15 215 8 HOH HOH . G 3 HOH A 16 216 13 HOH HOH . G 3 HOH A 17 217 24 HOH HOH . G 3 HOH A 18 218 3 HOH HOH . G 3 HOH A 19 219 2 HOH HOH . G 3 HOH A 20 220 9 HOH HOH . G 3 HOH A 21 221 20 HOH HOH . G 3 HOH A 22 222 5 HOH HOH . G 3 HOH A 23 223 34 HOH HOH . G 3 HOH A 24 224 11 HOH HOH . G 3 HOH A 25 225 21 HOH HOH . G 3 HOH A 26 226 27 HOH HOH . G 3 HOH A 27 227 4 HOH HOH . G 3 HOH A 28 228 14 HOH HOH . G 3 HOH A 29 229 25 HOH HOH . G 3 HOH A 30 230 19 HOH HOH . G 3 HOH A 31 231 44 HOH HOH . G 3 HOH A 32 232 43 HOH HOH . G 3 HOH A 33 233 23 HOH HOH . G 3 HOH A 34 234 29 HOH HOH . G 3 HOH A 35 235 45 HOH HOH . G 3 HOH A 36 236 38 HOH HOH . G 3 HOH A 37 237 32 HOH HOH . G 3 HOH A 38 238 33 HOH HOH . G 3 HOH A 39 239 28 HOH HOH . G 3 HOH A 40 240 39 HOH HOH . G 3 HOH A 41 241 41 HOH HOH . G 3 HOH A 42 242 42 HOH HOH . G 3 HOH A 43 243 12 HOH HOH . G 3 HOH A 44 244 37 HOH HOH . G 3 HOH A 45 245 36 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AG _atom_site.label_atom_id AG _atom_site.label_comp_id AG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.915 _atom_site.Cartn_y 0.747 _atom_site.Cartn_z -2.809 _atom_site.occupancy 0.22 _atom_site.B_iso_or_equiv 30.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AG _atom_site.auth_comp_id AG _atom_site.auth_seq_id 104 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #