data_5F15 # _model_server_result.job_id TQyl98XZ0S48UnosjgzUhg _model_server_result.datetime_utc '2024-11-21 14:19:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"ZB","auth_seq_id":677}' # _entry.id 5F15 # _exptl.entry_id 5F15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5F15 _cell.length_a 59.648 _cell.length_b 80.322 _cell.length_c 150.161 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id ZB _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 233 n n N1 C6 EPE sing 234 n n N1 C9 EPE sing 235 n n C2 C3 EPE sing 236 n n C2 H21 EPE sing 237 n n C2 H22 EPE sing 238 n n C3 N4 EPE sing 239 n n C3 H31 EPE sing 240 n n C3 H32 EPE sing 241 n n N4 C5 EPE sing 242 n n N4 C7 EPE sing 243 n n C5 C6 EPE sing 244 n n C5 H51 EPE sing 245 n n C5 H52 EPE sing 246 n n C6 H61 EPE sing 247 n n C6 H62 EPE sing 248 n n C7 C8 EPE sing 249 n n C7 H71 EPE sing 250 n n C7 H72 EPE sing 251 n n C8 O8 EPE sing 252 n n C8 H81 EPE sing 253 n n C8 H82 EPE sing 254 n n O8 HO8 EPE sing 255 n n C9 C10 EPE sing 256 n n C9 H91 EPE sing 257 n n C9 H92 EPE sing 258 n n C10 S EPE sing 259 n n C10 H101 EPE sing 260 n n C10 H102 EPE sing 261 n n S O1S EPE doub 262 n n S O2S EPE doub 263 n n S O3S EPE sing 264 n n O3S HOS3 EPE sing 265 n n # _atom_sites.entry_id 5F15 _atom_sites.fract_transf_matrix[1][1] 0.016765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPG A 1 601 1 MPG UNL . C 2 MPG A 1 602 3 MPG UNL . D 2 MPG A 1 603 4 MPG UNL . E 2 MPG A 1 604 5 MPG UNL . F 2 MPG A 1 605 11 MPG UNL . G 2 MPG A 1 606 12 MPG UNL . H 2 MPG A 1 607 13 MPG UNL . I 2 MPG A 1 608 15 MPG UNL . J 2 MPG A 1 609 16 MPG UNL . K 2 MPG A 1 610 18 MPG UNL . L 2 MPG A 1 611 19 MPG UNL . M 2 MPG A 1 612 23 MPG UNL . N 2 MPG A 1 613 24 MPG UNL . O 2 MPG A 1 614 25 MPG UNL . P 2 MPG A 1 615 26 MPG UNL . Q 2 MPG A 1 616 28 MPG UNL . R 2 MPG A 1 617 29 MPG UNL . S 2 MPG A 1 618 30 MPG UNL . T 2 MPG A 1 619 31 MPG UNL . U 2 MPG A 1 620 32 MPG UNL . V 2 MPG A 1 621 33 MPG UNL . W 2 MPG A 1 622 34 MPG UNL . X 2 MPG A 1 623 35 MPG UNL . Y 2 MPG A 1 624 36 MPG UNL . Z 2 MPG A 1 625 38 MPG UNL . AA 2 MPG A 1 626 39 MPG UNL . BA 2 MPG A 1 627 40 MPG UNL . CA 2 MPG A 1 628 41 MPG UNL . DA 2 MPG A 1 629 42 MPG UNL . EA 2 MPG A 1 630 43 MPG UNL . FA 2 MPG A 1 631 44 MPG UNL . GA 2 MPG A 1 632 46 MPG UNL . HA 2 MPG A 1 633 48 MPG UNL . IA 2 MPG A 1 634 49 MPG UNL . JA 2 MPG A 1 635 50 MPG UNL . KA 2 MPG A 1 636 51 MPG UNL . LA 2 MPG A 1 637 52 MPG UNL . MA 2 MPG A 1 638 53 MPG UNL . NA 2 MPG A 1 639 54 MPG UNL . OA 2 MPG A 1 640 56 MPG UNL . PA 2 MPG A 1 641 57 MPG UNL . QA 2 MPG A 1 642 58 MPG UNL . RA 2 MPG A 1 643 59 MPG UNL . SA 2 MPG A 1 644 60 MPG UNL . TA 2 MPG A 1 645 62 MPG UNL . UA 2 MPG A 1 646 63 MPG UNL . VA 2 MPG A 1 647 64 MPG UNL . WA 2 MPG A 1 648 65 MPG UNL . XA 2 MPG A 1 649 68 MPG UNL . YA 2 MPG A 1 650 69 MPG UNL . ZA 2 MPG A 1 651 70 MPG UNL . AB 2 MPG A 1 652 71 MPG UNL . BB 2 MPG A 1 653 72 MPG UNL . CB 2 MPG A 1 654 73 MPG UNL . DB 2 MPG A 1 655 74 MPG UNL . EB 2 MPG A 1 656 76 MPG UNL . FB 2 MPG A 1 657 79 MPG UNL . GB 2 MPG A 1 658 81 MPG UNL . HB 2 MPG A 1 659 82 MPG UNL . IB 2 MPG A 1 660 83 MPG UNL . JB 2 MPG A 1 661 84 MPG UNL . KB 2 MPG A 1 662 85 MPG UNL . LB 2 MPG A 1 663 86 MPG UNL . MB 2 MPG A 1 664 87 MPG UNL . NB 2 MPG A 1 665 89 MPG UNL . OB 2 MPG A 1 666 91 MPG UNL . PB 2 MPG A 1 667 94 MPG UNL . QB 2 MPG A 1 668 96 MPG UNL . RB 2 MPG A 1 669 98 MPG UNL . SB 2 MPG A 1 670 99 MPG UNL . TB 2 MPG A 1 671 101 MPG UNL . UB 2 MPG A 1 672 102 MPG UNL . VB 2 MPG A 1 673 103 MPG UNL . WB 2 MPG A 1 674 106 MPG UNL . XB 2 MPG A 1 675 107 MPG UNL . YB 2 MPG A 1 676 109 MPG UNL . ZB 3 EPE A 1 677 1 EPE EPE . AC 4 PO4 A 1 678 1 PO4 PO4 . BC 5 CL A 1 679 1 CL CL . CC 5 CL A 1 680 2 CL CL . DC 6 5TR A 1 681 1 5TR UNP . EC 7 HOH A 1 701 5 HOH HOH . EC 7 HOH A 2 702 3 HOH HOH . EC 7 HOH A 3 703 6 HOH HOH . EC 7 HOH A 4 704 4 HOH HOH . EC 7 HOH A 5 705 2 HOH HOH . EC 7 HOH A 6 706 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . ZB 3 66.213 4.649 58.222 1 116.83 ? N1 EPE 677 A 1 HETATM 2 C C2 EPE . . . ZB 3 66.914 4.894 56.944 1 116.64 ? C2 EPE 677 A 1 HETATM 3 C C3 EPE . . . ZB 3 67.822 6.119 56.993 1 115.87 ? C3 EPE 677 A 1 HETATM 4 N N4 EPE . . . ZB 3 67.069 7.292 57.387 1 114.86 ? N4 EPE 677 A 1 HETATM 5 C C5 EPE . . . ZB 3 65.904 7.094 58.223 1 115.33 ? C5 EPE 677 A 1 HETATM 6 C C6 EPE . . . ZB 3 66.09 5.846 59.077 1 116.04 ? C6 EPE 677 A 1 HETATM 7 C C7 EPE . . . ZB 3 67.624 8.62 57.203 1 113.55 ? C7 EPE 677 A 1 HETATM 8 C C8 EPE . . . ZB 3 66.554 9.701 57.3 1 112.62 ? C8 EPE 677 A 1 HETATM 9 O O8 EPE . . . ZB 3 67.054 10.908 56.771 1 112.46 ? O8 EPE 677 A 1 HETATM 10 C C9 EPE . . . ZB 3 64.874 4.11 57.939 1 117.19 ? C9 EPE 677 A 1 HETATM 11 C C10 EPE . . . ZB 3 64.929 2.593 57.814 1 116.75 ? C10 EPE 677 A 1 HETATM 12 S S EPE . . . ZB 3 63.352 1.906 57.252 1 115.78 ? S EPE 677 A 1 HETATM 13 O O1S EPE . . . ZB 3 63.606 0.824 56.306 1 116.11 ? O1S EPE 677 A 1 HETATM 14 O O2S EPE . . . ZB 3 62.573 2.952 56.595 1 115.96 ? O2S EPE 677 A 1 HETATM 15 O O3S EPE . . . ZB 3 62.606 1.392 58.397 1 114.91 ? O3S EPE 677 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 439 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #