data_5F2P # _model_server_result.job_id mosUKadduapL8mp_vEiqHQ _model_server_result.datetime_utc '2024-11-17 01:58:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5F2P # _exptl.entry_id 5F2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.228 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(dimethylamino)-6-methyl-pyrido[4,3-d]pyrimidin-5-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5F2P _cell.length_a 70.924 _cell.length_b 125.413 _cell.length_c 29.525 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H12 N4 O' _chem_comp.formula_weight 204.228 _chem_comp.id 5TY _chem_comp.mon_nstd_flag . _chem_comp.name 2-(dimethylamino)-6-methyl-pyrido[4,3-d]pyrimidin-5-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 N11 5TY sing 1 n n C14 N11 5TY sing 2 n n N11 C3 5TY sing 3 n n C3 N4 5TY doub 4 n y C3 N7 5TY sing 5 n y N4 C5 5TY sing 6 n y N7 C10 5TY doub 7 n y C5 C8 5TY sing 8 n n C5 C1 5TY doub 9 n y C8 C9 5TY doub 10 n n C9 N6 5TY sing 11 n n C10 C1 5TY sing 12 n y C1 C2 5TY sing 13 n n N6 C2 5TY sing 14 n n N6 C13 5TY sing 15 n n C2 O12 5TY doub 16 n n C8 H1 5TY sing 17 n n C10 H2 5TY sing 18 n n C13 H3 5TY sing 19 n n C13 H4 5TY sing 20 n n C13 H5 5TY sing 21 n n C15 H6 5TY sing 22 n n C15 H7 5TY sing 23 n n C15 H8 5TY sing 24 n n C9 H9 5TY sing 25 n n C14 H10 5TY sing 26 n n C14 H11 5TY sing 27 n n C14 H12 5TY sing 28 n n # _atom_sites.entry_id 5F2P _atom_sites.fract_transf_matrix[1][1] 0.0141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.03387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5TY A 1 201 1 5TY LIG . D 2 5TY B 1 201 2 5TY LIG . E 3 HOH A 1 301 160 HOH HOH . E 3 HOH A 2 302 235 HOH HOH . E 3 HOH A 3 303 109 HOH HOH . E 3 HOH A 4 304 144 HOH HOH . E 3 HOH A 5 305 5 HOH HOH . E 3 HOH A 6 306 51 HOH HOH . E 3 HOH A 7 307 132 HOH HOH . E 3 HOH A 8 308 57 HOH HOH . E 3 HOH A 9 309 59 HOH HOH . E 3 HOH A 10 310 37 HOH HOH . E 3 HOH A 11 311 30 HOH HOH . E 3 HOH A 12 312 31 HOH HOH . E 3 HOH A 13 313 118 HOH HOH . E 3 HOH A 14 314 80 HOH HOH . E 3 HOH A 15 315 32 HOH HOH . E 3 HOH A 16 316 44 HOH HOH . E 3 HOH A 17 317 207 HOH HOH . E 3 HOH A 18 318 19 HOH HOH . E 3 HOH A 19 319 94 HOH HOH . E 3 HOH A 20 320 156 HOH HOH . E 3 HOH A 21 321 52 HOH HOH . E 3 HOH A 22 322 104 HOH HOH . E 3 HOH A 23 323 84 HOH HOH . E 3 HOH A 24 324 72 HOH HOH . E 3 HOH A 25 325 91 HOH HOH . E 3 HOH A 26 326 226 HOH HOH . E 3 HOH A 27 327 75 HOH HOH . E 3 HOH A 28 328 56 HOH HOH . E 3 HOH A 29 329 39 HOH HOH . E 3 HOH A 30 330 203 HOH HOH . E 3 HOH A 31 331 110 HOH HOH . E 3 HOH A 32 332 135 HOH HOH . E 3 HOH A 33 333 123 HOH HOH . E 3 HOH A 34 334 158 HOH HOH . E 3 HOH A 35 335 97 HOH HOH . E 3 HOH A 36 336 62 HOH HOH . E 3 HOH A 37 337 8 HOH HOH . E 3 HOH A 38 338 141 HOH HOH . E 3 HOH A 39 339 82 HOH HOH . E 3 HOH A 40 340 46 HOH HOH . E 3 HOH A 41 341 100 HOH HOH . E 3 HOH A 42 342 229 HOH HOH . E 3 HOH A 43 343 98 HOH HOH . E 3 HOH A 44 344 129 HOH HOH . E 3 HOH A 45 345 69 HOH HOH . E 3 HOH A 46 346 63 HOH HOH . E 3 HOH A 47 347 13 HOH HOH . E 3 HOH A 48 348 146 HOH HOH . E 3 HOH A 49 349 140 HOH HOH . E 3 HOH A 50 350 95 HOH HOH . E 3 HOH A 51 351 193 HOH HOH . E 3 HOH A 52 352 126 HOH HOH . E 3 HOH A 53 353 24 HOH HOH . E 3 HOH A 54 354 43 HOH HOH . E 3 HOH A 55 355 151 HOH HOH . E 3 HOH A 56 356 232 HOH HOH . E 3 HOH A 57 357 86 HOH HOH . E 3 HOH A 58 358 11 HOH HOH . E 3 HOH A 59 359 113 HOH HOH . E 3 HOH A 60 360 162 HOH HOH . E 3 HOH A 61 361 150 HOH HOH . E 3 HOH A 62 362 200 HOH HOH . E 3 HOH A 63 363 50 HOH HOH . E 3 HOH A 64 364 154 HOH HOH . E 3 HOH A 65 365 96 HOH HOH . E 3 HOH A 66 366 142 HOH HOH . E 3 HOH A 67 367 47 HOH HOH . E 3 HOH A 68 368 114 HOH HOH . E 3 HOH A 69 369 210 HOH HOH . E 3 HOH A 70 370 76 HOH HOH . E 3 HOH A 71 371 83 HOH HOH . E 3 HOH A 72 372 78 HOH HOH . E 3 HOH A 73 373 165 HOH HOH . E 3 HOH A 74 374 79 HOH HOH . E 3 HOH A 75 375 148 HOH HOH . E 3 HOH A 76 376 233 HOH HOH . E 3 HOH A 77 377 202 HOH HOH . E 3 HOH A 78 378 41 HOH HOH . E 3 HOH A 79 379 143 HOH HOH . E 3 HOH A 80 380 216 HOH HOH . E 3 HOH A 81 381 149 HOH HOH . E 3 HOH A 82 382 147 HOH HOH . E 3 HOH A 83 383 134 HOH HOH . E 3 HOH A 84 384 152 HOH HOH . E 3 HOH A 85 385 212 HOH HOH . E 3 HOH A 86 386 188 HOH HOH . E 3 HOH A 87 387 209 HOH HOH . E 3 HOH A 88 388 213 HOH HOH . E 3 HOH A 89 389 224 HOH HOH . E 3 HOH A 90 390 219 HOH HOH . E 3 HOH A 91 391 171 HOH HOH . E 3 HOH A 92 392 177 HOH HOH . E 3 HOH A 93 393 205 HOH HOH . E 3 HOH A 94 394 195 HOH HOH . E 3 HOH A 95 395 196 HOH HOH . E 3 HOH A 96 396 234 HOH HOH . E 3 HOH A 97 397 198 HOH HOH . E 3 HOH A 98 398 180 HOH HOH . E 3 HOH A 99 399 201 HOH HOH . E 3 HOH A 100 400 197 HOH HOH . E 3 HOH A 101 401 179 HOH HOH . E 3 HOH A 102 402 221 HOH HOH . E 3 HOH A 103 403 169 HOH HOH . E 3 HOH A 104 404 208 HOH HOH . E 3 HOH A 105 405 231 HOH HOH . E 3 HOH A 106 406 215 HOH HOH . E 3 HOH A 107 407 230 HOH HOH . F 3 HOH B 1 301 159 HOH HOH . F 3 HOH B 2 302 17 HOH HOH . F 3 HOH B 3 303 108 HOH HOH . F 3 HOH B 4 304 9 HOH HOH . F 3 HOH B 5 305 16 HOH HOH . F 3 HOH B 6 306 28 HOH HOH . F 3 HOH B 7 307 1 HOH HOH . F 3 HOH B 8 308 107 HOH HOH . F 3 HOH B 9 309 6 HOH HOH . F 3 HOH B 10 310 10 HOH HOH . F 3 HOH B 11 311 102 HOH HOH . F 3 HOH B 12 312 26 HOH HOH . F 3 HOH B 13 313 7 HOH HOH . F 3 HOH B 14 314 74 HOH HOH . F 3 HOH B 15 315 12 HOH HOH . F 3 HOH B 16 316 106 HOH HOH . F 3 HOH B 17 317 33 HOH HOH . F 3 HOH B 18 318 73 HOH HOH . F 3 HOH B 19 319 22 HOH HOH . F 3 HOH B 20 320 67 HOH HOH . F 3 HOH B 21 321 58 HOH HOH . F 3 HOH B 22 322 65 HOH HOH . F 3 HOH B 23 323 64 HOH HOH . F 3 HOH B 24 324 23 HOH HOH . F 3 HOH B 25 325 21 HOH HOH . F 3 HOH B 26 326 87 HOH HOH . F 3 HOH B 27 327 130 HOH HOH . F 3 HOH B 28 328 71 HOH HOH . F 3 HOH B 29 329 66 HOH HOH . F 3 HOH B 30 330 48 HOH HOH . F 3 HOH B 31 331 112 HOH HOH . F 3 HOH B 32 332 81 HOH HOH . F 3 HOH B 33 333 77 HOH HOH . F 3 HOH B 34 334 36 HOH HOH . F 3 HOH B 35 335 18 HOH HOH . F 3 HOH B 36 336 70 HOH HOH . F 3 HOH B 37 337 34 HOH HOH . F 3 HOH B 38 338 128 HOH HOH . F 3 HOH B 39 339 101 HOH HOH . F 3 HOH B 40 340 49 HOH HOH . F 3 HOH B 41 341 139 HOH HOH . F 3 HOH B 42 342 176 HOH HOH . F 3 HOH B 43 343 25 HOH HOH . F 3 HOH B 44 344 45 HOH HOH . F 3 HOH B 45 345 137 HOH HOH . F 3 HOH B 46 346 68 HOH HOH . F 3 HOH B 47 347 29 HOH HOH . F 3 HOH B 48 348 131 HOH HOH . F 3 HOH B 49 349 20 HOH HOH . F 3 HOH B 50 350 88 HOH HOH . F 3 HOH B 51 351 60 HOH HOH . F 3 HOH B 52 352 93 HOH HOH . F 3 HOH B 53 353 89 HOH HOH . F 3 HOH B 54 354 145 HOH HOH . F 3 HOH B 55 355 61 HOH HOH . F 3 HOH B 56 356 38 HOH HOH . F 3 HOH B 57 357 127 HOH HOH . F 3 HOH B 58 358 3 HOH HOH . F 3 HOH B 59 359 27 HOH HOH . F 3 HOH B 60 360 54 HOH HOH . F 3 HOH B 61 361 166 HOH HOH . F 3 HOH B 62 362 14 HOH HOH . F 3 HOH B 63 363 42 HOH HOH . F 3 HOH B 64 364 53 HOH HOH . F 3 HOH B 65 365 217 HOH HOH . F 3 HOH B 66 366 2 HOH HOH . F 3 HOH B 67 367 4 HOH HOH . F 3 HOH B 68 368 117 HOH HOH . F 3 HOH B 69 369 228 HOH HOH . F 3 HOH B 70 370 85 HOH HOH . F 3 HOH B 71 371 40 HOH HOH . F 3 HOH B 72 372 138 HOH HOH . F 3 HOH B 73 373 220 HOH HOH . F 3 HOH B 74 374 115 HOH HOH . F 3 HOH B 75 375 111 HOH HOH . F 3 HOH B 76 376 122 HOH HOH . F 3 HOH B 77 377 90 HOH HOH . F 3 HOH B 78 378 55 HOH HOH . F 3 HOH B 79 379 124 HOH HOH . F 3 HOH B 80 380 170 HOH HOH . F 3 HOH B 81 381 92 HOH HOH . F 3 HOH B 82 382 168 HOH HOH . F 3 HOH B 83 383 116 HOH HOH . F 3 HOH B 84 384 103 HOH HOH . F 3 HOH B 85 385 125 HOH HOH . F 3 HOH B 86 386 120 HOH HOH . F 3 HOH B 87 387 155 HOH HOH . F 3 HOH B 88 388 35 HOH HOH . F 3 HOH B 89 389 157 HOH HOH . F 3 HOH B 90 390 133 HOH HOH . F 3 HOH B 91 391 153 HOH HOH . F 3 HOH B 92 392 99 HOH HOH . F 3 HOH B 93 393 121 HOH HOH . F 3 HOH B 94 394 136 HOH HOH . F 3 HOH B 95 395 119 HOH HOH . F 3 HOH B 96 396 15 HOH HOH . F 3 HOH B 97 397 227 HOH HOH . F 3 HOH B 98 398 105 HOH HOH . F 3 HOH B 99 399 167 HOH HOH . F 3 HOH B 100 400 194 HOH HOH . F 3 HOH B 101 401 163 HOH HOH . F 3 HOH B 102 402 161 HOH HOH . F 3 HOH B 103 403 225 HOH HOH . F 3 HOH B 104 404 184 HOH HOH . F 3 HOH B 105 405 206 HOH HOH . F 3 HOH B 106 406 204 HOH HOH . F 3 HOH B 107 407 191 HOH HOH . F 3 HOH B 108 408 164 HOH HOH . F 3 HOH B 109 409 211 HOH HOH . F 3 HOH B 110 410 192 HOH HOH . F 3 HOH B 111 411 172 HOH HOH . F 3 HOH B 112 412 182 HOH HOH . F 3 HOH B 113 413 186 HOH HOH . F 3 HOH B 114 414 175 HOH HOH . F 3 HOH B 115 415 223 HOH HOH . F 3 HOH B 116 416 173 HOH HOH . F 3 HOH B 117 417 187 HOH HOH . F 3 HOH B 118 418 181 HOH HOH . F 3 HOH B 119 419 218 HOH HOH . F 3 HOH B 120 420 199 HOH HOH . F 3 HOH B 121 421 183 HOH HOH . F 3 HOH B 122 422 174 HOH HOH . F 3 HOH B 123 423 178 HOH HOH . F 3 HOH B 124 424 222 HOH HOH . F 3 HOH B 125 425 214 HOH HOH . F 3 HOH B 126 426 189 HOH HOH . F 3 HOH B 127 427 185 HOH HOH . F 3 HOH B 128 428 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 5TY . . . C 2 -24.858 -5.38 -10.641 1 37.54 ? C5 5TY 201 A 1 HETATM 2 C C8 5TY . . . C 2 -25.575 -4.115 -10.618 1 36.88 ? C8 5TY 201 A 1 HETATM 3 C C10 5TY . . . C 2 -22.878 -6.653 -10.433 1 37.51 ? C10 5TY 201 A 1 HETATM 4 C C13 5TY . . . C 2 -22.851 -1.682 -10.045 1 35.86 ? C13 5TY 201 A 1 HETATM 5 C C15 5TY . . . C 2 -27.004 -8.794 -11.283 1 40.11 ? C15 5TY 201 A 1 HETATM 6 C C1 5TY . . . C 2 -23.472 -5.391 -10.429 1 37.09 ? C1 5TY 201 A 1 HETATM 7 C C2 5TY . . . C 2 -22.759 -4.118 -10.221 1 36.68 ? C2 5TY 201 A 1 HETATM 8 C C3 5TY . . . C 2 -24.869 -7.671 -10.845 1 38.94 ? C3 5TY 201 A 1 HETATM 9 N N4 5TY . . . C 2 -25.568 -6.509 -10.845 1 37.74 ? N4 5TY 201 A 1 HETATM 10 N N6 5TY . . . C 2 -23.539 -2.959 -10.24 1 36.6 ? N6 5TY 201 A 1 HETATM 11 N N7 5TY . . . C 2 -23.539 -7.796 -10.652 1 38.36 ? N7 5TY 201 A 1 HETATM 12 C C9 5TY . . . C 2 -24.896 -2.98 -10.445 1 36.93 ? C9 5TY 201 A 1 HETATM 13 N N11 5TY . . . C 2 -25.567 -8.811 -11.044 1 40.25 ? N11 5TY 201 A 1 HETATM 14 O O12 5TY . . . C 2 -21.556 -4.048 -10.04 1 36.34 ? O12 5TY 201 A 1 HETATM 15 C C14 5TY . . . C 2 -24.913 -10.111 -11.06 1 40.5 ? C14 5TY 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #