data_5F33 # _model_server_result.job_id TSGq5CMXBrUhKfTIDZEEWg _model_server_result.datetime_utc '2024-11-27 15:15:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5F33 # _exptl.entry_id 5F33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.1 _cell.angle_gamma 90 _cell.entry_id 5F33 _cell.length_a 52.094 _cell.length_b 49.16 _cell.length_c 60.221 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 88 A CYS 81 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 A SG CYS 175 A CYS 168 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc3 A SG CYS 261 A CYS 254 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc4 B FE3 SF4 . A SF4 301 1_555 C O2 PGH . A PGH 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.011 ? metalc ? metalc5 B FE3 SF4 . A SF4 301 1_555 C O1 PGH . A PGH 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.434 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 317 n n S O2 SO4 doub 318 n n S O3 SO4 sing 319 n n S O4 SO4 sing 320 n n # _atom_sites.entry_id 5F33 _atom_sites.fract_transf_matrix[1][1] 0.019196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004821 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020342 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 301 SF4 SF4 . C 3 PGH A 1 302 302 PGH PGH . D 4 SO4 A 1 303 303 SO4 SO4 . E 4 SO4 A 1 304 304 SO4 SO4 . F 4 SO4 A 1 305 305 SO4 SO4 . G 5 HOH A 1 401 409 HOH HOH . G 5 HOH A 2 402 406 HOH HOH . G 5 HOH A 3 403 410 HOH HOH . G 5 HOH A 4 404 411 HOH HOH . G 5 HOH A 5 405 412 HOH HOH . G 5 HOH A 6 406 413 HOH HOH . G 5 HOH A 7 407 414 HOH HOH . G 5 HOH A 8 408 415 HOH HOH . G 5 HOH A 9 409 416 HOH HOH . G 5 HOH A 10 410 417 HOH HOH . G 5 HOH A 11 411 418 HOH HOH . G 5 HOH A 12 412 419 HOH HOH . G 5 HOH A 13 413 420 HOH HOH . G 5 HOH A 14 414 421 HOH HOH . G 5 HOH A 15 415 422 HOH HOH . G 5 HOH A 16 416 423 HOH HOH . G 5 HOH A 17 417 424 HOH HOH . G 5 HOH A 18 418 425 HOH HOH . G 5 HOH A 19 419 426 HOH HOH . G 5 HOH A 20 420 427 HOH HOH . G 5 HOH A 21 421 428 HOH HOH . G 5 HOH A 22 422 429 HOH HOH . G 5 HOH A 23 423 430 HOH HOH . G 5 HOH A 24 424 431 HOH HOH . G 5 HOH A 25 425 432 HOH HOH . G 5 HOH A 26 426 433 HOH HOH . G 5 HOH A 27 427 434 HOH HOH . G 5 HOH A 28 428 435 HOH HOH . G 5 HOH A 29 429 436 HOH HOH . G 5 HOH A 30 430 437 HOH HOH . G 5 HOH A 31 431 438 HOH HOH . G 5 HOH A 32 432 439 HOH HOH . G 5 HOH A 33 433 440 HOH HOH . G 5 HOH A 34 434 441 HOH HOH . G 5 HOH A 35 435 442 HOH HOH . G 5 HOH A 36 436 443 HOH HOH . G 5 HOH A 37 437 444 HOH HOH . G 5 HOH A 38 438 445 HOH HOH . G 5 HOH A 39 439 446 HOH HOH . G 5 HOH A 40 440 447 HOH HOH . G 5 HOH A 41 441 448 HOH HOH . G 5 HOH A 42 442 449 HOH HOH . G 5 HOH A 43 443 450 HOH HOH . G 5 HOH A 44 444 451 HOH HOH . G 5 HOH A 45 445 452 HOH HOH . G 5 HOH A 46 446 453 HOH HOH . G 5 HOH A 47 447 454 HOH HOH . G 5 HOH A 48 448 455 HOH HOH . G 5 HOH A 49 449 456 HOH HOH . G 5 HOH A 50 450 457 HOH HOH . G 5 HOH A 51 451 458 HOH HOH . G 5 HOH A 52 452 459 HOH HOH . G 5 HOH A 53 453 460 HOH HOH . G 5 HOH A 54 454 461 HOH HOH . G 5 HOH A 55 455 462 HOH HOH . G 5 HOH A 56 456 463 HOH HOH . G 5 HOH A 57 457 464 HOH HOH . G 5 HOH A 58 458 465 HOH HOH . G 5 HOH A 59 459 466 HOH HOH . G 5 HOH A 60 460 467 HOH HOH . G 5 HOH A 61 461 468 HOH HOH . G 5 HOH A 62 462 469 HOH HOH . G 5 HOH A 63 463 470 HOH HOH . G 5 HOH A 64 464 471 HOH HOH . G 5 HOH A 65 465 472 HOH HOH . G 5 HOH A 66 466 473 HOH HOH . G 5 HOH A 67 467 474 HOH HOH . G 5 HOH A 68 468 475 HOH HOH . G 5 HOH A 69 469 476 HOH HOH . G 5 HOH A 70 470 477 HOH HOH . G 5 HOH A 71 471 478 HOH HOH . G 5 HOH A 72 472 479 HOH HOH . G 5 HOH A 73 473 480 HOH HOH . G 5 HOH A 74 474 481 HOH HOH . G 5 HOH A 75 475 482 HOH HOH . G 5 HOH A 76 476 483 HOH HOH . G 5 HOH A 77 477 484 HOH HOH . G 5 HOH A 78 478 485 HOH HOH . G 5 HOH A 79 479 486 HOH HOH . G 5 HOH A 80 480 487 HOH HOH . G 5 HOH A 81 481 488 HOH HOH . G 5 HOH A 82 482 489 HOH HOH . G 5 HOH A 83 483 490 HOH HOH . G 5 HOH A 84 484 491 HOH HOH . G 5 HOH A 85 485 492 HOH HOH . G 5 HOH A 86 486 493 HOH HOH . G 5 HOH A 87 487 494 HOH HOH . G 5 HOH A 88 488 495 HOH HOH . G 5 HOH A 89 489 496 HOH HOH . G 5 HOH A 90 490 497 HOH HOH . G 5 HOH A 91 491 498 HOH HOH . G 5 HOH A 92 492 499 HOH HOH . G 5 HOH A 93 493 500 HOH HOH . G 5 HOH A 94 494 501 HOH HOH . G 5 HOH A 95 495 502 HOH HOH . G 5 HOH A 96 496 503 HOH HOH . G 5 HOH A 97 497 504 HOH HOH . G 5 HOH A 98 498 505 HOH HOH . G 5 HOH A 99 499 506 HOH HOH . G 5 HOH A 100 500 507 HOH HOH . G 5 HOH A 101 501 508 HOH HOH . G 5 HOH A 102 502 509 HOH HOH . G 5 HOH A 103 503 510 HOH HOH . G 5 HOH A 104 504 511 HOH HOH . G 5 HOH A 105 505 512 HOH HOH . G 5 HOH A 106 506 513 HOH HOH . G 5 HOH A 107 507 514 HOH HOH . G 5 HOH A 108 508 515 HOH HOH . G 5 HOH A 109 509 516 HOH HOH . G 5 HOH A 110 510 517 HOH HOH . G 5 HOH A 111 511 518 HOH HOH . G 5 HOH A 112 512 519 HOH HOH . G 5 HOH A 113 513 401 HOH HOH . G 5 HOH A 114 514 520 HOH HOH . G 5 HOH A 115 515 521 HOH HOH . G 5 HOH A 116 516 522 HOH HOH . G 5 HOH A 117 517 523 HOH HOH . G 5 HOH A 118 518 524 HOH HOH . G 5 HOH A 119 519 525 HOH HOH . G 5 HOH A 120 520 526 HOH HOH . G 5 HOH A 121 521 527 HOH HOH . G 5 HOH A 122 522 528 HOH HOH . G 5 HOH A 123 523 529 HOH HOH . G 5 HOH A 124 524 530 HOH HOH . G 5 HOH A 125 525 531 HOH HOH . G 5 HOH A 126 526 532 HOH HOH . G 5 HOH A 127 527 533 HOH HOH . G 5 HOH A 128 528 534 HOH HOH . G 5 HOH A 129 529 535 HOH HOH . G 5 HOH A 130 530 536 HOH HOH . G 5 HOH A 131 531 537 HOH HOH . G 5 HOH A 132 532 538 HOH HOH . G 5 HOH A 133 533 539 HOH HOH . G 5 HOH A 134 534 540 HOH HOH . G 5 HOH A 135 535 541 HOH HOH . G 5 HOH A 136 536 542 HOH HOH . G 5 HOH A 137 537 543 HOH HOH . G 5 HOH A 138 538 544 HOH HOH . G 5 HOH A 139 539 545 HOH HOH . G 5 HOH A 140 540 546 HOH HOH . G 5 HOH A 141 541 547 HOH HOH . G 5 HOH A 142 542 548 HOH HOH . G 5 HOH A 143 543 549 HOH HOH . G 5 HOH A 144 544 550 HOH HOH . G 5 HOH A 145 545 551 HOH HOH . G 5 HOH A 146 546 552 HOH HOH . G 5 HOH A 147 547 553 HOH HOH . G 5 HOH A 148 548 554 HOH HOH . G 5 HOH A 149 549 555 HOH HOH . G 5 HOH A 150 550 556 HOH HOH . G 5 HOH A 151 551 557 HOH HOH . G 5 HOH A 152 552 558 HOH HOH . G 5 HOH A 153 553 559 HOH HOH . G 5 HOH A 154 554 560 HOH HOH . G 5 HOH A 155 555 561 HOH HOH . G 5 HOH A 156 556 562 HOH HOH . G 5 HOH A 157 557 563 HOH HOH . G 5 HOH A 158 558 564 HOH HOH . G 5 HOH A 159 559 565 HOH HOH . G 5 HOH A 160 560 566 HOH HOH . G 5 HOH A 161 561 567 HOH HOH . G 5 HOH A 162 562 568 HOH HOH . G 5 HOH A 163 563 569 HOH HOH . G 5 HOH A 164 564 570 HOH HOH . G 5 HOH A 165 565 571 HOH HOH . G 5 HOH A 166 566 572 HOH HOH . G 5 HOH A 167 567 573 HOH HOH . G 5 HOH A 168 568 574 HOH HOH . G 5 HOH A 169 569 575 HOH HOH . G 5 HOH A 170 570 576 HOH HOH . G 5 HOH A 171 571 577 HOH HOH . G 5 HOH A 172 572 405 HOH HOH . G 5 HOH A 173 573 578 HOH HOH . G 5 HOH A 174 574 579 HOH HOH . G 5 HOH A 175 575 580 HOH HOH . G 5 HOH A 176 576 581 HOH HOH . G 5 HOH A 177 577 582 HOH HOH . G 5 HOH A 178 578 583 HOH HOH . G 5 HOH A 179 579 584 HOH HOH . G 5 HOH A 180 580 585 HOH HOH . G 5 HOH A 181 581 586 HOH HOH . G 5 HOH A 182 582 587 HOH HOH . G 5 HOH A 183 583 588 HOH HOH . G 5 HOH A 184 584 589 HOH HOH . G 5 HOH A 185 585 408 HOH HOH . G 5 HOH A 186 586 590 HOH HOH . G 5 HOH A 187 587 591 HOH HOH . G 5 HOH A 188 588 592 HOH HOH . G 5 HOH A 189 589 593 HOH HOH . G 5 HOH A 190 590 402 HOH HOH . G 5 HOH A 191 591 594 HOH HOH . G 5 HOH A 192 592 595 HOH HOH . G 5 HOH A 193 593 596 HOH HOH . G 5 HOH A 194 594 597 HOH HOH . G 5 HOH A 195 595 598 HOH HOH . G 5 HOH A 196 596 599 HOH HOH . G 5 HOH A 197 597 600 HOH HOH . G 5 HOH A 198 598 601 HOH HOH . G 5 HOH A 199 599 602 HOH HOH . G 5 HOH A 200 600 603 HOH HOH . G 5 HOH A 201 601 604 HOH HOH . G 5 HOH A 202 602 403 HOH HOH . G 5 HOH A 203 603 605 HOH HOH . G 5 HOH A 204 604 606 HOH HOH . G 5 HOH A 205 605 607 HOH HOH . G 5 HOH A 206 606 608 HOH HOH . G 5 HOH A 207 607 609 HOH HOH . G 5 HOH A 208 608 610 HOH HOH . G 5 HOH A 209 609 611 HOH HOH . G 5 HOH A 210 610 612 HOH HOH . G 5 HOH A 211 611 613 HOH HOH . G 5 HOH A 212 612 614 HOH HOH . G 5 HOH A 213 613 615 HOH HOH . G 5 HOH A 214 614 616 HOH HOH . G 5 HOH A 215 615 617 HOH HOH . G 5 HOH A 216 616 618 HOH HOH . G 5 HOH A 217 617 619 HOH HOH . G 5 HOH A 218 618 620 HOH HOH . G 5 HOH A 219 619 621 HOH HOH . G 5 HOH A 220 620 622 HOH HOH . G 5 HOH A 221 621 623 HOH HOH . G 5 HOH A 222 622 626 HOH HOH . G 5 HOH A 223 623 627 HOH HOH . G 5 HOH A 224 624 628 HOH HOH . G 5 HOH A 225 625 629 HOH HOH . G 5 HOH A 226 626 630 HOH HOH . G 5 HOH A 227 627 631 HOH HOH . G 5 HOH A 228 628 632 HOH HOH . G 5 HOH A 229 629 633 HOH HOH . G 5 HOH A 230 630 634 HOH HOH . G 5 HOH A 231 631 635 HOH HOH . G 5 HOH A 232 632 636 HOH HOH . G 5 HOH A 233 633 637 HOH HOH . G 5 HOH A 234 634 638 HOH HOH . G 5 HOH A 235 635 639 HOH HOH . G 5 HOH A 236 636 640 HOH HOH . G 5 HOH A 237 637 641 HOH HOH . G 5 HOH A 238 638 642 HOH HOH . G 5 HOH A 239 639 643 HOH HOH . G 5 HOH A 240 640 644 HOH HOH . G 5 HOH A 241 641 645 HOH HOH . G 5 HOH A 242 642 646 HOH HOH . G 5 HOH A 243 643 647 HOH HOH . G 5 HOH A 244 644 648 HOH HOH . G 5 HOH A 245 645 649 HOH HOH . G 5 HOH A 246 646 650 HOH HOH . G 5 HOH A 247 647 651 HOH HOH . G 5 HOH A 248 648 652 HOH HOH . G 5 HOH A 249 649 653 HOH HOH . G 5 HOH A 250 650 654 HOH HOH . G 5 HOH A 251 651 655 HOH HOH . G 5 HOH A 252 652 656 HOH HOH . G 5 HOH A 253 653 657 HOH HOH . G 5 HOH A 254 654 658 HOH HOH . G 5 HOH A 255 655 659 HOH HOH . G 5 HOH A 256 656 660 HOH HOH . G 5 HOH A 257 657 661 HOH HOH . G 5 HOH A 258 658 662 HOH HOH . G 5 HOH A 259 659 663 HOH HOH . G 5 HOH A 260 660 664 HOH HOH . G 5 HOH A 261 661 665 HOH HOH . G 5 HOH A 262 662 666 HOH HOH . G 5 HOH A 263 663 667 HOH HOH . G 5 HOH A 264 664 668 HOH HOH . G 5 HOH A 265 665 669 HOH HOH . G 5 HOH A 266 666 670 HOH HOH . G 5 HOH A 267 667 671 HOH HOH . G 5 HOH A 268 668 672 HOH HOH . G 5 HOH A 269 669 673 HOH HOH . G 5 HOH A 270 670 674 HOH HOH . G 5 HOH A 271 671 675 HOH HOH . G 5 HOH A 272 672 676 HOH HOH . G 5 HOH A 273 673 677 HOH HOH . G 5 HOH A 274 674 678 HOH HOH . G 5 HOH A 275 675 679 HOH HOH . G 5 HOH A 276 676 625 HOH HOH . G 5 HOH A 277 677 404 HOH HOH . G 5 HOH A 278 678 680 HOH HOH . G 5 HOH A 279 679 681 HOH HOH . G 5 HOH A 280 680 682 HOH HOH . G 5 HOH A 281 681 624 HOH HOH . G 5 HOH A 282 682 683 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 45.169 -10.244 1.605 1 43.52 ? S SO4 303 A 1 HETATM 2 O O1 SO4 . . . D 4 44.784 -8.807 1.494 1 46.44 ? O1 SO4 303 A 1 HETATM 3 O O2 SO4 . . . D 4 44.609 -11.043 0.492 1 46.7 ? O2 SO4 303 A 1 HETATM 4 O O3 SO4 . . . D 4 44.645 -10.768 2.881 1 48.88 ? O3 SO4 303 A 1 HETATM 5 O O4 SO4 . . . D 4 46.645 -10.366 1.583 1 45.62 ? O4 SO4 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 464 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #