data_5F4N # _model_server_result.job_id KvYoVuuZoVzhKTbBeJCTqg _model_server_result.datetime_utc '2024-11-25 10:01:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f4n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5F4N # _exptl.entry_id 5F4N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.69 _cell.angle_gamma 90 _cell.entry_id 5F4N _cell.length_a 44.97 _cell.length_b 65.87 _cell.length_c 57.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F4N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 131 n n C1 C2 EDO sing 132 n n C1 H11 EDO sing 133 n n C1 H12 EDO sing 134 n n O1 HO1 EDO sing 135 n n C2 O2 EDO sing 136 n n C2 H21 EDO sing 137 n n C2 H22 EDO sing 138 n n O2 HO2 EDO sing 139 n n # _atom_sites.entry_id 5F4N _atom_sites.fract_transf_matrix[1][1] 0.022237 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001824 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5UY A 1 301 1 5UY 076 . C 2 5UY A 1 302 2 5UY 076 . D 3 EDO A 1 303 2 EDO EDO . E 3 EDO A 1 304 3 EDO EDO . F 3 EDO A 1 305 4 EDO EDO . G 3 EDO A 1 306 5 EDO EDO . H 4 GOL A 1 307 1 GOL GOL . I 4 GOL A 1 308 2 GOL GOL . J 5 HOH A 1 401 81 HOH HOH . J 5 HOH A 2 402 68 HOH HOH . J 5 HOH A 3 403 12 HOH HOH . J 5 HOH A 4 404 184 HOH HOH . J 5 HOH A 5 405 138 HOH HOH . J 5 HOH A 6 406 66 HOH HOH . J 5 HOH A 7 407 114 HOH HOH . J 5 HOH A 8 408 92 HOH HOH . J 5 HOH A 9 409 208 HOH HOH . J 5 HOH A 10 410 19 HOH HOH . J 5 HOH A 11 411 76 HOH HOH . J 5 HOH A 12 412 25 HOH HOH . J 5 HOH A 13 413 13 HOH HOH . J 5 HOH A 14 414 42 HOH HOH . J 5 HOH A 15 415 136 HOH HOH . J 5 HOH A 16 416 327 HOH HOH . J 5 HOH A 17 417 219 HOH HOH . J 5 HOH A 18 418 220 HOH HOH . J 5 HOH A 19 419 224 HOH HOH . J 5 HOH A 20 420 83 HOH HOH . J 5 HOH A 21 421 155 HOH HOH . J 5 HOH A 22 422 106 HOH HOH . J 5 HOH A 23 423 3 HOH HOH . J 5 HOH A 24 424 152 HOH HOH . J 5 HOH A 25 425 1 HOH HOH . J 5 HOH A 26 426 103 HOH HOH . J 5 HOH A 27 427 306 HOH HOH . J 5 HOH A 28 428 91 HOH HOH . J 5 HOH A 29 429 131 HOH HOH . J 5 HOH A 30 430 174 HOH HOH . J 5 HOH A 31 431 11 HOH HOH . J 5 HOH A 32 432 101 HOH HOH . J 5 HOH A 33 433 304 HOH HOH . J 5 HOH A 34 434 53 HOH HOH . J 5 HOH A 35 435 141 HOH HOH . J 5 HOH A 36 436 26 HOH HOH . J 5 HOH A 37 437 271 HOH HOH . J 5 HOH A 38 438 5 HOH HOH . J 5 HOH A 39 439 202 HOH HOH . J 5 HOH A 40 440 35 HOH HOH . J 5 HOH A 41 441 146 HOH HOH . J 5 HOH A 42 442 18 HOH HOH . J 5 HOH A 43 443 17 HOH HOH . J 5 HOH A 44 444 32 HOH HOH . J 5 HOH A 45 445 28 HOH HOH . J 5 HOH A 46 446 302 HOH HOH . J 5 HOH A 47 447 169 HOH HOH . J 5 HOH A 48 448 22 HOH HOH . J 5 HOH A 49 449 15 HOH HOH . J 5 HOH A 50 450 165 HOH HOH . J 5 HOH A 51 451 204 HOH HOH . J 5 HOH A 52 452 319 HOH HOH . J 5 HOH A 53 453 115 HOH HOH . J 5 HOH A 54 454 85 HOH HOH . J 5 HOH A 55 455 128 HOH HOH . J 5 HOH A 56 456 37 HOH HOH . J 5 HOH A 57 457 324 HOH HOH . J 5 HOH A 58 458 160 HOH HOH . J 5 HOH A 59 459 67 HOH HOH . J 5 HOH A 60 460 78 HOH HOH . J 5 HOH A 61 461 277 HOH HOH . J 5 HOH A 62 462 269 HOH HOH . J 5 HOH A 63 463 112 HOH HOH . J 5 HOH A 64 464 173 HOH HOH . J 5 HOH A 65 465 222 HOH HOH . J 5 HOH A 66 466 206 HOH HOH . J 5 HOH A 67 467 88 HOH HOH . J 5 HOH A 68 468 132 HOH HOH . J 5 HOH A 69 469 8 HOH HOH . J 5 HOH A 70 470 121 HOH HOH . J 5 HOH A 71 471 58 HOH HOH . J 5 HOH A 72 472 61 HOH HOH . J 5 HOH A 73 473 119 HOH HOH . J 5 HOH A 74 474 229 HOH HOH . J 5 HOH A 75 475 316 HOH HOH . J 5 HOH A 76 476 129 HOH HOH . J 5 HOH A 77 477 216 HOH HOH . J 5 HOH A 78 478 295 HOH HOH . J 5 HOH A 79 479 309 HOH HOH . J 5 HOH A 80 480 154 HOH HOH . J 5 HOH A 81 481 288 HOH HOH . J 5 HOH A 82 482 214 HOH HOH . J 5 HOH A 83 483 320 HOH HOH . J 5 HOH A 84 484 6 HOH HOH . J 5 HOH A 85 485 307 HOH HOH . J 5 HOH A 86 486 86 HOH HOH . J 5 HOH A 87 487 261 HOH HOH . J 5 HOH A 88 488 16 HOH HOH . J 5 HOH A 89 489 113 HOH HOH . J 5 HOH A 90 490 84 HOH HOH . J 5 HOH A 91 491 328 HOH HOH . J 5 HOH A 92 492 135 HOH HOH . J 5 HOH A 93 493 117 HOH HOH . J 5 HOH A 94 494 299 HOH HOH . J 5 HOH A 95 495 52 HOH HOH . J 5 HOH A 96 496 39 HOH HOH . J 5 HOH A 97 497 139 HOH HOH . J 5 HOH A 98 498 291 HOH HOH . J 5 HOH A 99 499 69 HOH HOH . J 5 HOH A 100 500 38 HOH HOH . J 5 HOH A 101 501 90 HOH HOH . J 5 HOH A 102 502 263 HOH HOH . J 5 HOH A 103 503 120 HOH HOH . J 5 HOH A 104 504 209 HOH HOH . J 5 HOH A 105 505 62 HOH HOH . J 5 HOH A 106 506 20 HOH HOH . J 5 HOH A 107 507 97 HOH HOH . J 5 HOH A 108 508 257 HOH HOH . J 5 HOH A 109 509 185 HOH HOH . J 5 HOH A 110 510 21 HOH HOH . J 5 HOH A 111 511 71 HOH HOH . J 5 HOH A 112 512 94 HOH HOH . J 5 HOH A 113 513 301 HOH HOH . J 5 HOH A 114 514 82 HOH HOH . J 5 HOH A 115 515 56 HOH HOH . J 5 HOH A 116 516 274 HOH HOH . J 5 HOH A 117 517 57 HOH HOH . J 5 HOH A 118 518 145 HOH HOH . J 5 HOH A 119 519 55 HOH HOH . J 5 HOH A 120 520 34 HOH HOH . J 5 HOH A 121 521 54 HOH HOH . J 5 HOH A 122 522 285 HOH HOH . J 5 HOH A 123 523 207 HOH HOH . J 5 HOH A 124 524 65 HOH HOH . J 5 HOH A 125 525 240 HOH HOH . J 5 HOH A 126 526 275 HOH HOH . J 5 HOH A 127 527 33 HOH HOH . J 5 HOH A 128 528 217 HOH HOH . J 5 HOH A 129 529 254 HOH HOH . J 5 HOH A 130 530 175 HOH HOH . J 5 HOH A 131 531 64 HOH HOH . J 5 HOH A 132 532 9 HOH HOH . J 5 HOH A 133 533 245 HOH HOH . J 5 HOH A 134 534 186 HOH HOH . J 5 HOH A 135 535 162 HOH HOH . J 5 HOH A 136 536 46 HOH HOH . J 5 HOH A 137 537 111 HOH HOH . J 5 HOH A 138 538 4 HOH HOH . J 5 HOH A 139 539 196 HOH HOH . J 5 HOH A 140 540 253 HOH HOH . J 5 HOH A 141 541 2 HOH HOH . J 5 HOH A 142 542 329 HOH HOH . J 5 HOH A 143 543 181 HOH HOH . J 5 HOH A 144 544 96 HOH HOH . J 5 HOH A 145 545 212 HOH HOH . J 5 HOH A 146 546 126 HOH HOH . J 5 HOH A 147 547 215 HOH HOH . J 5 HOH A 148 548 130 HOH HOH . J 5 HOH A 149 549 7 HOH HOH . J 5 HOH A 150 550 177 HOH HOH . J 5 HOH A 151 551 24 HOH HOH . J 5 HOH A 152 552 218 HOH HOH . J 5 HOH A 153 553 70 HOH HOH . J 5 HOH A 154 554 40 HOH HOH . J 5 HOH A 155 555 167 HOH HOH . J 5 HOH A 156 556 232 HOH HOH . J 5 HOH A 157 557 73 HOH HOH . J 5 HOH A 158 558 99 HOH HOH . J 5 HOH A 159 559 74 HOH HOH . J 5 HOH A 160 560 14 HOH HOH . J 5 HOH A 161 561 36 HOH HOH . J 5 HOH A 162 562 109 HOH HOH . J 5 HOH A 163 563 23 HOH HOH . J 5 HOH A 164 564 10 HOH HOH . J 5 HOH A 165 565 60 HOH HOH . J 5 HOH A 166 566 127 HOH HOH . J 5 HOH A 167 567 31 HOH HOH . J 5 HOH A 168 568 156 HOH HOH . J 5 HOH A 169 569 102 HOH HOH . J 5 HOH A 170 570 144 HOH HOH . J 5 HOH A 171 571 239 HOH HOH . J 5 HOH A 172 572 142 HOH HOH . J 5 HOH A 173 573 290 HOH HOH . J 5 HOH A 174 574 49 HOH HOH . J 5 HOH A 175 575 118 HOH HOH . J 5 HOH A 176 576 286 HOH HOH . J 5 HOH A 177 577 63 HOH HOH . J 5 HOH A 178 578 93 HOH HOH . J 5 HOH A 179 579 47 HOH HOH . J 5 HOH A 180 580 183 HOH HOH . J 5 HOH A 181 581 150 HOH HOH . J 5 HOH A 182 582 238 HOH HOH . J 5 HOH A 183 583 122 HOH HOH . J 5 HOH A 184 584 164 HOH HOH . J 5 HOH A 185 585 125 HOH HOH . J 5 HOH A 186 586 297 HOH HOH . J 5 HOH A 187 587 280 HOH HOH . J 5 HOH A 188 588 80 HOH HOH . J 5 HOH A 189 589 140 HOH HOH . J 5 HOH A 190 590 323 HOH HOH . J 5 HOH A 191 591 168 HOH HOH . J 5 HOH A 192 592 77 HOH HOH . J 5 HOH A 193 593 273 HOH HOH . J 5 HOH A 194 594 241 HOH HOH . J 5 HOH A 195 595 292 HOH HOH . J 5 HOH A 196 596 89 HOH HOH . J 5 HOH A 197 597 72 HOH HOH . J 5 HOH A 198 598 242 HOH HOH . J 5 HOH A 199 599 95 HOH HOH . J 5 HOH A 200 600 195 HOH HOH . J 5 HOH A 201 601 243 HOH HOH . J 5 HOH A 202 602 75 HOH HOH . J 5 HOH A 203 603 308 HOH HOH . J 5 HOH A 204 604 87 HOH HOH . J 5 HOH A 205 605 282 HOH HOH . J 5 HOH A 206 606 30 HOH HOH . J 5 HOH A 207 607 268 HOH HOH . J 5 HOH A 208 608 259 HOH HOH . J 5 HOH A 209 609 235 HOH HOH . J 5 HOH A 210 610 137 HOH HOH . J 5 HOH A 211 611 187 HOH HOH . J 5 HOH A 212 612 151 HOH HOH . J 5 HOH A 213 613 256 HOH HOH . J 5 HOH A 214 614 194 HOH HOH . J 5 HOH A 215 615 157 HOH HOH . J 5 HOH A 216 616 134 HOH HOH . J 5 HOH A 217 617 251 HOH HOH . J 5 HOH A 218 618 213 HOH HOH . J 5 HOH A 219 619 289 HOH HOH . J 5 HOH A 220 620 330 HOH HOH . J 5 HOH A 221 621 247 HOH HOH . J 5 HOH A 222 622 163 HOH HOH . J 5 HOH A 223 623 226 HOH HOH . J 5 HOH A 224 624 203 HOH HOH . J 5 HOH A 225 625 283 HOH HOH . J 5 HOH A 226 626 179 HOH HOH . J 5 HOH A 227 627 116 HOH HOH . J 5 HOH A 228 628 272 HOH HOH . J 5 HOH A 229 629 225 HOH HOH . J 5 HOH A 230 630 248 HOH HOH . J 5 HOH A 231 631 211 HOH HOH . J 5 HOH A 232 632 59 HOH HOH . J 5 HOH A 233 633 200 HOH HOH . J 5 HOH A 234 634 221 HOH HOH . J 5 HOH A 235 635 266 HOH HOH . J 5 HOH A 236 636 188 HOH HOH . J 5 HOH A 237 637 326 HOH HOH . J 5 HOH A 238 638 189 HOH HOH . J 5 HOH A 239 639 110 HOH HOH . J 5 HOH A 240 640 27 HOH HOH . J 5 HOH A 241 641 315 HOH HOH . J 5 HOH A 242 642 98 HOH HOH . J 5 HOH A 243 643 294 HOH HOH . J 5 HOH A 244 644 310 HOH HOH . J 5 HOH A 245 645 45 HOH HOH . J 5 HOH A 246 646 287 HOH HOH . J 5 HOH A 247 647 159 HOH HOH . J 5 HOH A 248 648 311 HOH HOH . J 5 HOH A 249 649 100 HOH HOH . J 5 HOH A 250 650 197 HOH HOH . J 5 HOH A 251 651 105 HOH HOH . J 5 HOH A 252 652 182 HOH HOH . J 5 HOH A 253 653 325 HOH HOH . J 5 HOH A 254 654 133 HOH HOH . J 5 HOH A 255 655 201 HOH HOH . J 5 HOH A 256 656 41 HOH HOH . J 5 HOH A 257 657 278 HOH HOH . J 5 HOH A 258 658 230 HOH HOH . J 5 HOH A 259 659 267 HOH HOH . J 5 HOH A 260 660 176 HOH HOH . J 5 HOH A 261 661 255 HOH HOH . J 5 HOH A 262 662 279 HOH HOH . J 5 HOH A 263 663 193 HOH HOH . J 5 HOH A 264 664 233 HOH HOH . J 5 HOH A 265 665 262 HOH HOH . J 5 HOH A 266 666 270 HOH HOH . J 5 HOH A 267 667 44 HOH HOH . J 5 HOH A 268 668 104 HOH HOH . J 5 HOH A 269 669 170 HOH HOH . J 5 HOH A 270 670 43 HOH HOH . J 5 HOH A 271 671 313 HOH HOH . J 5 HOH A 272 672 231 HOH HOH . J 5 HOH A 273 673 124 HOH HOH . J 5 HOH A 274 674 29 HOH HOH . J 5 HOH A 275 675 303 HOH HOH . J 5 HOH A 276 676 180 HOH HOH . J 5 HOH A 277 677 166 HOH HOH . J 5 HOH A 278 678 298 HOH HOH . J 5 HOH A 279 679 205 HOH HOH . J 5 HOH A 280 680 48 HOH HOH . J 5 HOH A 281 681 296 HOH HOH . J 5 HOH A 282 682 244 HOH HOH . J 5 HOH A 283 683 321 HOH HOH . J 5 HOH A 284 684 293 HOH HOH . J 5 HOH A 285 685 108 HOH HOH . J 5 HOH A 286 686 312 HOH HOH . J 5 HOH A 287 687 228 HOH HOH . J 5 HOH A 288 688 153 HOH HOH . J 5 HOH A 289 689 171 HOH HOH . J 5 HOH A 290 690 51 HOH HOH . J 5 HOH A 291 691 252 HOH HOH . J 5 HOH A 292 692 281 HOH HOH . J 5 HOH A 293 693 223 HOH HOH . J 5 HOH A 294 694 50 HOH HOH . J 5 HOH A 295 695 161 HOH HOH . J 5 HOH A 296 696 276 HOH HOH . J 5 HOH A 297 697 147 HOH HOH . J 5 HOH A 298 698 318 HOH HOH . J 5 HOH A 299 699 148 HOH HOH . J 5 HOH A 300 700 191 HOH HOH . J 5 HOH A 301 701 246 HOH HOH . J 5 HOH A 302 702 79 HOH HOH . J 5 HOH A 303 703 192 HOH HOH . J 5 HOH A 304 704 143 HOH HOH . J 5 HOH A 305 705 123 HOH HOH . J 5 HOH A 306 706 227 HOH HOH . J 5 HOH A 307 707 107 HOH HOH . J 5 HOH A 308 708 190 HOH HOH . J 5 HOH A 309 709 237 HOH HOH . J 5 HOH A 310 710 258 HOH HOH . J 5 HOH A 311 711 284 HOH HOH . J 5 HOH A 312 712 314 HOH HOH . J 5 HOH A 313 713 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 1.11 14.651 28.077 1 57.22 ? C1 EDO 304 A 1 HETATM 2 O O1 EDO . . . E 3 0.5 15.189 26.912 1 56.77 ? O1 EDO 304 A 1 HETATM 3 C C2 EDO . . . E 3 1.982 15.707 28.789 1 57.63 ? C2 EDO 304 A 1 HETATM 4 O O2 EDO . . . E 3 2.854 16.359 27.87 1 58.24 ? O2 EDO 304 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #