data_5F5Z
#
_model_server_result.job_id            JU7MY0S4-rNO13mqfHYYHw 
_model_server_result.datetime_utc      '2024-10-19 03:50:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5f5z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    5F5Z 
#
_exptl.entry_id    5F5Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5F5Z 
_cell.length_a            34.6 
_cell.length_b            47.37 
_cell.length_c            77.73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5F5Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 157 n n 
C1 C2 EDO sing 158 n n 
C1 H11 EDO sing 159 n n 
C1 H12 EDO sing 160 n n 
O1 HO1 EDO sing 161 n n 
C2 O2 EDO sing 162 n n 
C2 H21 EDO sing 163 n n 
C2 H22 EDO sing 164 n n 
O2 HO2 EDO sing 165 n n 
#
_atom_sites.entry_id                     5F5Z 
_atom_sites.fract_transf_matrix[1][1]    0.028902 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02111 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012865 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5VY A 1 201 1 5VY LIG . 
C 3 EDO A 1 202 1 EDO EDO . 
D 3 EDO A 1 203 2 EDO EDO . 
E 4 HOH A 1 301 66 HOH HOH . 
E 4 HOH A 2 302 31 HOH HOH . 
E 4 HOH A 3 303 56 HOH HOH . 
E 4 HOH A 4 304 39 HOH HOH . 
E 4 HOH A 5 305 2 HOH HOH . 
E 4 HOH A 6 306 67 HOH HOH . 
E 4 HOH A 7 307 54 HOH HOH . 
E 4 HOH A 8 308 28 HOH HOH . 
E 4 HOH A 9 309 20 HOH HOH . 
E 4 HOH A 10 310 29 HOH HOH . 
E 4 HOH A 11 311 6 HOH HOH . 
E 4 HOH A 12 312 44 HOH HOH . 
E 4 HOH A 13 313 43 HOH HOH . 
E 4 HOH A 14 314 9 HOH HOH . 
E 4 HOH A 15 315 22 HOH HOH . 
E 4 HOH A 16 316 72 HOH HOH . 
E 4 HOH A 17 317 12 HOH HOH . 
E 4 HOH A 18 318 41 HOH HOH . 
E 4 HOH A 19 319 14 HOH HOH . 
E 4 HOH A 20 320 16 HOH HOH . 
E 4 HOH A 21 321 34 HOH HOH . 
E 4 HOH A 22 322 4 HOH HOH . 
E 4 HOH A 23 323 37 HOH HOH . 
E 4 HOH A 24 324 74 HOH HOH . 
E 4 HOH A 25 325 17 HOH HOH . 
E 4 HOH A 26 326 40 HOH HOH . 
E 4 HOH A 27 327 42 HOH HOH . 
E 4 HOH A 28 328 80 HOH HOH . 
E 4 HOH A 29 329 11 HOH HOH . 
E 4 HOH A 30 330 24 HOH HOH . 
E 4 HOH A 31 331 3 HOH HOH . 
E 4 HOH A 32 332 47 HOH HOH . 
E 4 HOH A 33 333 53 HOH HOH . 
E 4 HOH A 34 334 60 HOH HOH . 
E 4 HOH A 35 335 38 HOH HOH . 
E 4 HOH A 36 336 1 HOH HOH . 
E 4 HOH A 37 337 18 HOH HOH . 
E 4 HOH A 38 338 51 HOH HOH . 
E 4 HOH A 39 339 48 HOH HOH . 
E 4 HOH A 40 340 30 HOH HOH . 
E 4 HOH A 41 341 59 HOH HOH . 
E 4 HOH A 42 342 33 HOH HOH . 
E 4 HOH A 43 343 15 HOH HOH . 
E 4 HOH A 44 344 13 HOH HOH . 
E 4 HOH A 45 345 8 HOH HOH . 
E 4 HOH A 46 346 75 HOH HOH . 
E 4 HOH A 47 347 7 HOH HOH . 
E 4 HOH A 48 348 10 HOH HOH . 
E 4 HOH A 49 349 68 HOH HOH . 
E 4 HOH A 50 350 36 HOH HOH . 
E 4 HOH A 51 351 19 HOH HOH . 
E 4 HOH A 52 352 35 HOH HOH . 
E 4 HOH A 53 353 65 HOH HOH . 
E 4 HOH A 54 354 73 HOH HOH . 
E 4 HOH A 55 355 49 HOH HOH . 
E 4 HOH A 56 356 58 HOH HOH . 
E 4 HOH A 57 357 26 HOH HOH . 
E 4 HOH A 58 358 21 HOH HOH . 
E 4 HOH A 59 359 45 HOH HOH . 
E 4 HOH A 60 360 46 HOH HOH . 
E 4 HOH A 61 361 71 HOH HOH . 
E 4 HOH A 62 362 52 HOH HOH . 
E 4 HOH A 63 363 69 HOH HOH . 
E 4 HOH A 64 364 76 HOH HOH . 
E 4 HOH A 65 365 79 HOH HOH . 
E 4 HOH A 66 366 62 HOH HOH . 
E 4 HOH A 67 367 32 HOH HOH . 
E 4 HOH A 68 368 55 HOH HOH . 
E 4 HOH A 69 369 5 HOH HOH . 
E 4 HOH A 70 370 23 HOH HOH . 
E 4 HOH A 71 371 64 HOH HOH . 
E 4 HOH A 72 372 63 HOH HOH . 
E 4 HOH A 73 373 25 HOH HOH . 
E 4 HOH A 74 374 78 HOH HOH . 
E 4 HOH A 75 375 77 HOH HOH . 
E 4 HOH A 76 376 70 HOH HOH . 
E 4 HOH A 77 377 61 HOH HOH . 
E 4 HOH A 78 378 27 HOH HOH . 
E 4 HOH A 79 379 57 HOH HOH . 
E 4 HOH A 80 380 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 74.536 73.222 70.388 1 25.82 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . C 3 73.24 73.76 70.122 1 24.47 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . C 3 75.37 74.206 71.186 1 26.67 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . C 3 75.552 75.393 70.419 1 27.51 ? O2 EDO 202 A 1 
HETATM 5 H H11 EDO . . . C 3 75.04 72.998 69.445 1 30.98 ? H11 EDO 202 A 1 
HETATM 6 H H12 EDO . . . C 3 74.437 72.289 70.947 1 30.98 ? H12 EDO 202 A 1 
HETATM 7 H HO1 EDO . . . C 3 72.724 73.12 69.613 1 29.36 ? HO1 EDO 202 A 1 
HETATM 8 H H21 EDO . . . C 3 74.866 74.444 72.125 1 32 ? H21 EDO 202 A 1 
HETATM 9 H H22 EDO . . . C 3 76.341 73.764 71.421 1 32 ? H22 EDO 202 A 1 
HETATM 10 H HO2 EDO . . . C 3 76.083 76.025 70.923 1 33.02 ? HO2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
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