data_5F6E # _model_server_result.job_id TXR886F4iwSE2n04cqt1kw _model_server_result.datetime_utc '2024-11-25 09:24:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5F6E # _exptl.entry_id 5F6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.16 _cell.angle_gamma 90 _cell.entry_id 5F6E _cell.length_a 50.873 _cell.length_b 35.537 _cell.length_c 58.151 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5F6E _atom_sites.fract_transf_matrix[1][1] 0.019657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 3 HOH A 1 301 259 HOH HOH . C 3 HOH A 2 302 176 HOH HOH . C 3 HOH A 3 303 270 HOH HOH . C 3 HOH A 4 304 85 HOH HOH . C 3 HOH A 5 305 39 HOH HOH . C 3 HOH A 6 306 318 HOH HOH . C 3 HOH A 7 307 327 HOH HOH . C 3 HOH A 8 308 30 HOH HOH . C 3 HOH A 9 309 246 HOH HOH . C 3 HOH A 10 310 182 HOH HOH . C 3 HOH A 11 311 130 HOH HOH . C 3 HOH A 12 312 160 HOH HOH . C 3 HOH A 13 313 383 HOH HOH . C 3 HOH A 14 314 167 HOH HOH . C 3 HOH A 15 315 175 HOH HOH . C 3 HOH A 16 316 235 HOH HOH . C 3 HOH A 17 317 28 HOH HOH . C 3 HOH A 18 318 102 HOH HOH . C 3 HOH A 19 319 115 HOH HOH . C 3 HOH A 20 320 161 HOH HOH . C 3 HOH A 21 321 228 HOH HOH . C 3 HOH A 22 322 121 HOH HOH . C 3 HOH A 23 323 18 HOH HOH . C 3 HOH A 24 324 49 HOH HOH . C 3 HOH A 25 325 226 HOH HOH . C 3 HOH A 26 326 133 HOH HOH . C 3 HOH A 27 327 308 HOH HOH . C 3 HOH A 28 328 278 HOH HOH . C 3 HOH A 29 329 242 HOH HOH . C 3 HOH A 30 330 304 HOH HOH . C 3 HOH A 31 331 295 HOH HOH . C 3 HOH A 32 332 303 HOH HOH . C 3 HOH A 33 333 10 HOH HOH . C 3 HOH A 34 334 104 HOH HOH . C 3 HOH A 35 335 137 HOH HOH . C 3 HOH A 36 336 192 HOH HOH . C 3 HOH A 37 337 72 HOH HOH . C 3 HOH A 38 338 149 HOH HOH . C 3 HOH A 39 339 411 HOH HOH . C 3 HOH A 40 340 322 HOH HOH . C 3 HOH A 41 341 54 HOH HOH . C 3 HOH A 42 342 207 HOH HOH . C 3 HOH A 43 343 366 HOH HOH . C 3 HOH A 44 344 362 HOH HOH . C 3 HOH A 45 345 27 HOH HOH . C 3 HOH A 46 346 142 HOH HOH . C 3 HOH A 47 347 145 HOH HOH . C 3 HOH A 48 348 24 HOH HOH . C 3 HOH A 49 349 43 HOH HOH . C 3 HOH A 50 350 195 HOH HOH . C 3 HOH A 51 351 253 HOH HOH . C 3 HOH A 52 352 106 HOH HOH . C 3 HOH A 53 353 3 HOH HOH . C 3 HOH A 54 354 2 HOH HOH . C 3 HOH A 55 355 174 HOH HOH . C 3 HOH A 56 356 178 HOH HOH . C 3 HOH A 57 357 123 HOH HOH . C 3 HOH A 58 358 254 HOH HOH . C 3 HOH A 59 359 4 HOH HOH . C 3 HOH A 60 360 257 HOH HOH . C 3 HOH A 61 361 55 HOH HOH . C 3 HOH A 62 362 124 HOH HOH . C 3 HOH A 63 363 41 HOH HOH . C 3 HOH A 64 364 66 HOH HOH . C 3 HOH A 65 365 127 HOH HOH . C 3 HOH A 66 366 315 HOH HOH . C 3 HOH A 67 367 196 HOH HOH . C 3 HOH A 68 368 69 HOH HOH . C 3 HOH A 69 369 51 HOH HOH . C 3 HOH A 70 370 297 HOH HOH . C 3 HOH A 71 371 44 HOH HOH . C 3 HOH A 72 372 189 HOH HOH . C 3 HOH A 73 373 29 HOH HOH . C 3 HOH A 74 374 9 HOH HOH . C 3 HOH A 75 375 12 HOH HOH . C 3 HOH A 76 376 61 HOH HOH . C 3 HOH A 77 377 7 HOH HOH . C 3 HOH A 78 378 60 HOH HOH . C 3 HOH A 79 379 388 HOH HOH . C 3 HOH A 80 380 26 HOH HOH . C 3 HOH A 81 381 172 HOH HOH . C 3 HOH A 82 382 401 HOH HOH . C 3 HOH A 83 383 47 HOH HOH . C 3 HOH A 84 384 40 HOH HOH . C 3 HOH A 85 385 197 HOH HOH . C 3 HOH A 86 386 148 HOH HOH . C 3 HOH A 87 387 144 HOH HOH . C 3 HOH A 88 388 209 HOH HOH . C 3 HOH A 89 389 5 HOH HOH . C 3 HOH A 90 390 281 HOH HOH . C 3 HOH A 91 391 20 HOH HOH . C 3 HOH A 92 392 249 HOH HOH . C 3 HOH A 93 393 94 HOH HOH . C 3 HOH A 94 394 364 HOH HOH . C 3 HOH A 95 395 36 HOH HOH . C 3 HOH A 96 396 380 HOH HOH . C 3 HOH A 97 397 134 HOH HOH . C 3 HOH A 98 398 103 HOH HOH . C 3 HOH A 99 399 48 HOH HOH . C 3 HOH A 100 400 15 HOH HOH . C 3 HOH A 101 401 42 HOH HOH . C 3 HOH A 102 402 203 HOH HOH . C 3 HOH A 103 403 147 HOH HOH . C 3 HOH A 104 404 232 HOH HOH . C 3 HOH A 105 405 328 HOH HOH . C 3 HOH A 106 406 105 HOH HOH . C 3 HOH A 107 407 233 HOH HOH . C 3 HOH A 108 408 71 HOH HOH . C 3 HOH A 109 409 32 HOH HOH . C 3 HOH A 110 410 216 HOH HOH . C 3 HOH A 111 411 21 HOH HOH . C 3 HOH A 112 412 393 HOH HOH . C 3 HOH A 113 413 22 HOH HOH . C 3 HOH A 114 414 272 HOH HOH . C 3 HOH A 115 415 101 HOH HOH . C 3 HOH A 116 416 129 HOH HOH . C 3 HOH A 117 417 122 HOH HOH . C 3 HOH A 118 418 33 HOH HOH . C 3 HOH A 119 419 392 HOH HOH . C 3 HOH A 120 420 25 HOH HOH . C 3 HOH A 121 421 38 HOH HOH . C 3 HOH A 122 422 75 HOH HOH . C 3 HOH A 123 423 151 HOH HOH . C 3 HOH A 124 424 347 HOH HOH . C 3 HOH A 125 425 46 HOH HOH . C 3 HOH A 126 426 19 HOH HOH . C 3 HOH A 127 427 163 HOH HOH . C 3 HOH A 128 428 6 HOH HOH . C 3 HOH A 129 429 81 HOH HOH . C 3 HOH A 130 430 139 HOH HOH . C 3 HOH A 131 431 76 HOH HOH . C 3 HOH A 132 432 8 HOH HOH . C 3 HOH A 133 433 98 HOH HOH . C 3 HOH A 134 434 170 HOH HOH . C 3 HOH A 135 435 79 HOH HOH . C 3 HOH A 136 436 114 HOH HOH . C 3 HOH A 137 437 227 HOH HOH . C 3 HOH A 138 438 177 HOH HOH . C 3 HOH A 139 439 271 HOH HOH . C 3 HOH A 140 440 118 HOH HOH . C 3 HOH A 141 441 280 HOH HOH . C 3 HOH A 142 442 326 HOH HOH . C 3 HOH A 143 443 186 HOH HOH . C 3 HOH A 144 444 213 HOH HOH . C 3 HOH A 145 445 1 HOH HOH . C 3 HOH A 146 446 14 HOH HOH . C 3 HOH A 147 447 292 HOH HOH . C 3 HOH A 148 448 191 HOH HOH . C 3 HOH A 149 449 117 HOH HOH . C 3 HOH A 150 450 119 HOH HOH . C 3 HOH A 151 451 165 HOH HOH . C 3 HOH A 152 452 164 HOH HOH . C 3 HOH A 153 453 53 HOH HOH . C 3 HOH A 154 454 187 HOH HOH . C 3 HOH A 155 455 159 HOH HOH . C 3 HOH A 156 456 330 HOH HOH . C 3 HOH A 157 457 212 HOH HOH . C 3 HOH A 158 458 100 HOH HOH . C 3 HOH A 159 459 348 HOH HOH . C 3 HOH A 160 460 83 HOH HOH . C 3 HOH A 161 461 351 HOH HOH . C 3 HOH A 162 462 64 HOH HOH . C 3 HOH A 163 463 86 HOH HOH . C 3 HOH A 164 464 378 HOH HOH . C 3 HOH A 165 465 251 HOH HOH . C 3 HOH A 166 466 173 HOH HOH . C 3 HOH A 167 467 268 HOH HOH . C 3 HOH A 168 468 200 HOH HOH . C 3 HOH A 169 469 371 HOH HOH . C 3 HOH A 170 470 262 HOH HOH . C 3 HOH A 171 471 337 HOH HOH . C 3 HOH A 172 472 238 HOH HOH . C 3 HOH A 173 473 346 HOH HOH . C 3 HOH A 174 474 132 HOH HOH . C 3 HOH A 175 475 88 HOH HOH . C 3 HOH A 176 476 225 HOH HOH . C 3 HOH A 177 477 169 HOH HOH . C 3 HOH A 178 478 156 HOH HOH . C 3 HOH A 179 479 220 HOH HOH . C 3 HOH A 180 480 35 HOH HOH . C 3 HOH A 181 481 68 HOH HOH . C 3 HOH A 182 482 244 HOH HOH . C 3 HOH A 183 483 141 HOH HOH . C 3 HOH A 184 484 256 HOH HOH . C 3 HOH A 185 485 217 HOH HOH . C 3 HOH A 186 486 309 HOH HOH . C 3 HOH A 187 487 150 HOH HOH . C 3 HOH A 188 488 199 HOH HOH . C 3 HOH A 189 489 140 HOH HOH . C 3 HOH A 190 490 45 HOH HOH . C 3 HOH A 191 491 111 HOH HOH . C 3 HOH A 192 492 363 HOH HOH . C 3 HOH A 193 493 23 HOH HOH . C 3 HOH A 194 494 236 HOH HOH . C 3 HOH A 195 495 84 HOH HOH . C 3 HOH A 196 496 369 HOH HOH . C 3 HOH A 197 497 240 HOH HOH . C 3 HOH A 198 498 269 HOH HOH . C 3 HOH A 199 499 184 HOH HOH . C 3 HOH A 200 500 287 HOH HOH . C 3 HOH A 201 501 31 HOH HOH . C 3 HOH A 202 502 210 HOH HOH . C 3 HOH A 203 503 58 HOH HOH . C 3 HOH A 204 504 211 HOH HOH . C 3 HOH A 205 505 70 HOH HOH . C 3 HOH A 206 506 153 HOH HOH . C 3 HOH A 207 507 255 HOH HOH . C 3 HOH A 208 508 365 HOH HOH . C 3 HOH A 209 509 188 HOH HOH . C 3 HOH A 210 510 128 HOH HOH . C 3 HOH A 211 511 146 HOH HOH . C 3 HOH A 212 512 120 HOH HOH . C 3 HOH A 213 513 194 HOH HOH . C 3 HOH A 214 514 179 HOH HOH . C 3 HOH A 215 515 108 HOH HOH . C 3 HOH A 216 516 367 HOH HOH . C 3 HOH A 217 517 214 HOH HOH . C 3 HOH A 218 518 250 HOH HOH . C 3 HOH A 219 519 335 HOH HOH . C 3 HOH A 220 520 252 HOH HOH . C 3 HOH A 221 521 344 HOH HOH . C 3 HOH A 222 522 109 HOH HOH . C 3 HOH A 223 523 87 HOH HOH . C 3 HOH A 224 524 125 HOH HOH . C 3 HOH A 225 525 390 HOH HOH . C 3 HOH A 226 526 202 HOH HOH . C 3 HOH A 227 527 185 HOH HOH . C 3 HOH A 228 528 342 HOH HOH . C 3 HOH A 229 529 204 HOH HOH . C 3 HOH A 230 530 296 HOH HOH . C 3 HOH A 231 531 92 HOH HOH . C 3 HOH A 232 532 382 HOH HOH . C 3 HOH A 233 533 154 HOH HOH . C 3 HOH A 234 534 263 HOH HOH . C 3 HOH A 235 535 394 HOH HOH . C 3 HOH A 236 536 166 HOH HOH . C 3 HOH A 237 537 264 HOH HOH . C 3 HOH A 238 538 234 HOH HOH . C 3 HOH A 239 539 319 HOH HOH . C 3 HOH A 240 540 379 HOH HOH . C 3 HOH A 241 541 138 HOH HOH . C 3 HOH A 242 542 331 HOH HOH . C 3 HOH A 243 543 16 HOH HOH . C 3 HOH A 244 544 224 HOH HOH . C 3 HOH A 245 545 37 HOH HOH . C 3 HOH A 246 546 168 HOH HOH . C 3 HOH A 247 547 89 HOH HOH . C 3 HOH A 248 548 155 HOH HOH . C 3 HOH A 249 549 239 HOH HOH . C 3 HOH A 250 550 290 HOH HOH . C 3 HOH A 251 551 131 HOH HOH . C 3 HOH A 252 552 341 HOH HOH . C 3 HOH A 253 553 323 HOH HOH . C 3 HOH A 254 554 336 HOH HOH . C 3 HOH A 255 555 219 HOH HOH . C 3 HOH A 256 556 368 HOH HOH . C 3 HOH A 257 557 107 HOH HOH . C 3 HOH A 258 558 143 HOH HOH . C 3 HOH A 259 559 261 HOH HOH . C 3 HOH A 260 560 316 HOH HOH . C 3 HOH A 261 561 162 HOH HOH . C 3 HOH A 262 562 97 HOH HOH . C 3 HOH A 263 563 158 HOH HOH . C 3 HOH A 264 564 183 HOH HOH . C 3 HOH A 265 565 77 HOH HOH . C 3 HOH A 266 566 180 HOH HOH . C 3 HOH A 267 567 313 HOH HOH . C 3 HOH A 268 568 372 HOH HOH . C 3 HOH A 269 569 361 HOH HOH . C 3 HOH A 270 570 329 HOH HOH . C 3 HOH A 271 571 82 HOH HOH . C 3 HOH A 272 572 110 HOH HOH . C 3 HOH A 273 573 181 HOH HOH . C 3 HOH A 274 574 247 HOH HOH . C 3 HOH A 275 575 52 HOH HOH . C 3 HOH A 276 576 358 HOH HOH . C 3 HOH A 277 577 91 HOH HOH . C 3 HOH A 278 578 65 HOH HOH . C 3 HOH A 279 579 241 HOH HOH . C 3 HOH A 280 580 373 HOH HOH . C 3 HOH A 281 581 90 HOH HOH . C 3 HOH A 282 582 201 HOH HOH . C 3 HOH A 283 583 248 HOH HOH . C 3 HOH A 284 584 359 HOH HOH . C 3 HOH A 285 585 218 HOH HOH . C 3 HOH A 286 586 284 HOH HOH . C 3 HOH A 287 587 221 HOH HOH . C 3 HOH A 288 588 279 HOH HOH . C 3 HOH A 289 589 152 HOH HOH . C 3 HOH A 290 590 93 HOH HOH . C 3 HOH A 291 591 95 HOH HOH . C 3 HOH A 292 592 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 75.584 7.766 5.241 1 19.07 ? C1 EDO 201 A 1 HETATM 2 O O1 EDO . . . B 2 76.279 7.272 6.387 1 18.62 ? O1 EDO 201 A 1 HETATM 3 C C2 EDO . . . B 2 75.742 9.278 5.197 1 20.95 ? C2 EDO 201 A 1 HETATM 4 O O2 EDO . . . B 2 77.104 9.593 4.878 1 21.95 ? O2 EDO 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #