data_5F6K
#
_model_server_result.job_id            '_Tzfs4Luz5X-3kYtiGACzw' 
_model_server_result.datetime_utc      '2024-12-26 14:32:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5f6k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":5001}' 
#
_entry.id    5F6K 
#
_exptl.entry_id    5F6K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          5 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5F6K 
_cell.length_a            80.342 
_cell.length_b            236.076 
_cell.length_c            44.416 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5F6K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? heptameric 7 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
? tetrameric 4 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 1 1 
A,E,F,J,K,L,P,Q 2 1 
B,C,D,G,H,I,M,N,O 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C SG CYS 99 C CYS 4851 1_555 H ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc2 C SG CYS 147 C CYS 4899 1_555 H ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc3 C SG CYS 149 C CYS 4901 1_555 H ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc4 C SG CYS 154 C CYS 4906 1_555 H ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc5 E SG CYS 99 E CYS 4851 1_555 J ZN ZN . E ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc6 E SG CYS 147 E CYS 4899 1_555 J ZN ZN . E ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc7 E SG CYS 149 E CYS 4901 1_555 J ZN ZN . E ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc8 E SG CYS 154 E CYS 4906 1_555 J ZN ZN . E ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5F6K 
_atom_sites.fract_transf_matrix[1][1]    0.012447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004236 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022514 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 5 ZN C 1 5001 4970 ZN ZN . 
I 6 SAH C 1 5002 4971 SAH SAH . 
J 5 ZN E 1 5001 4970 ZN ZN . 
K 6 SAH E 1 5002 4971 SAH SAH . 
L 7 HOH A 1 601 48 HOH HOH . 
L 7 HOH A 2 602 147 HOH HOH . 
L 7 HOH A 3 603 158 HOH HOH . 
L 7 HOH A 4 604 30 HOH HOH . 
L 7 HOH A 5 605 113 HOH HOH . 
L 7 HOH A 6 606 179 HOH HOH . 
L 7 HOH A 7 607 4 HOH HOH . 
L 7 HOH A 8 608 128 HOH HOH . 
L 7 HOH A 9 609 102 HOH HOH . 
L 7 HOH A 10 610 218 HOH HOH . 
L 7 HOH A 11 611 18 HOH HOH . 
L 7 HOH A 12 612 65 HOH HOH . 
L 7 HOH A 13 613 34 HOH HOH . 
L 7 HOH A 14 614 164 HOH HOH . 
L 7 HOH A 15 615 62 HOH HOH . 
L 7 HOH A 16 616 97 HOH HOH . 
L 7 HOH A 17 617 69 HOH HOH . 
L 7 HOH A 18 618 9 HOH HOH . 
L 7 HOH A 19 619 109 HOH HOH . 
L 7 HOH A 20 620 193 HOH HOH . 
L 7 HOH A 21 621 25 HOH HOH . 
L 7 HOH A 22 622 2 HOH HOH . 
L 7 HOH A 23 623 21 HOH HOH . 
L 7 HOH A 24 624 83 HOH HOH . 
L 7 HOH A 25 625 205 HOH HOH . 
L 7 HOH A 26 626 129 HOH HOH . 
L 7 HOH A 27 627 149 HOH HOH . 
L 7 HOH A 28 628 148 HOH HOH . 
L 7 HOH A 29 629 199 HOH HOH . 
L 7 HOH A 30 630 56 HOH HOH . 
L 7 HOH A 31 631 192 HOH HOH . 
L 7 HOH A 32 632 154 HOH HOH . 
L 7 HOH A 33 633 117 HOH HOH . 
L 7 HOH A 34 634 198 HOH HOH . 
L 7 HOH A 35 635 13 HOH HOH . 
L 7 HOH A 36 636 31 HOH HOH . 
L 7 HOH A 37 637 58 HOH HOH . 
L 7 HOH A 38 638 36 HOH HOH . 
L 7 HOH A 39 639 37 HOH HOH . 
L 7 HOH A 40 640 200 HOH HOH . 
L 7 HOH A 41 641 71 HOH HOH . 
L 7 HOH A 42 642 137 HOH HOH . 
L 7 HOH A 43 643 176 HOH HOH . 
L 7 HOH A 44 644 8 HOH HOH . 
L 7 HOH A 45 645 84 HOH HOH . 
L 7 HOH A 46 646 126 HOH HOH . 
L 7 HOH A 47 647 43 HOH HOH . 
L 7 HOH A 48 648 38 HOH HOH . 
L 7 HOH A 49 649 169 HOH HOH . 
L 7 HOH A 50 650 189 HOH HOH . 
L 7 HOH A 51 651 159 HOH HOH . 
L 7 HOH A 52 652 136 HOH HOH . 
L 7 HOH A 53 653 16 HOH HOH . 
L 7 HOH A 54 654 42 HOH HOH . 
L 7 HOH A 55 655 105 HOH HOH . 
L 7 HOH A 56 656 24 HOH HOH . 
L 7 HOH A 57 657 153 HOH HOH . 
L 7 HOH A 58 658 181 HOH HOH . 
L 7 HOH A 59 659 221 HOH HOH . 
L 7 HOH A 60 660 166 HOH HOH . 
L 7 HOH A 61 661 91 HOH HOH . 
L 7 HOH A 62 662 152 HOH HOH . 
L 7 HOH A 63 663 195 HOH HOH . 
L 7 HOH A 64 664 94 HOH HOH . 
L 7 HOH A 65 665 110 HOH HOH . 
L 7 HOH A 66 666 77 HOH HOH . 
L 7 HOH A 67 667 118 HOH HOH . 
L 7 HOH A 68 668 114 HOH HOH . 
L 7 HOH A 69 669 174 HOH HOH . 
L 7 HOH A 70 670 119 HOH HOH . 
L 7 HOH A 71 671 96 HOH HOH . 
L 7 HOH A 72 672 206 HOH HOH . 
L 7 HOH A 73 673 220 HOH HOH . 
L 7 HOH A 74 674 90 HOH HOH . 
L 7 HOH A 75 675 75 HOH HOH . 
L 7 HOH A 76 676 194 HOH HOH . 
L 7 HOH A 77 677 131 HOH HOH . 
L 7 HOH A 78 678 212 HOH HOH . 
L 7 HOH A 79 679 133 HOH HOH . 
L 7 HOH A 80 680 151 HOH HOH . 
L 7 HOH A 81 681 141 HOH HOH . 
L 7 HOH A 82 682 173 HOH HOH . 
L 7 HOH A 83 683 175 HOH HOH . 
L 7 HOH A 84 684 185 HOH HOH . 
L 7 HOH A 85 685 215 HOH HOH . 
M 7 HOH B 1 601 19 HOH HOH . 
M 7 HOH B 2 602 143 HOH HOH . 
M 7 HOH B 3 603 78 HOH HOH . 
M 7 HOH B 4 604 27 HOH HOH . 
M 7 HOH B 5 605 81 HOH HOH . 
M 7 HOH B 6 606 66 HOH HOH . 
M 7 HOH B 7 607 45 HOH HOH . 
M 7 HOH B 8 608 22 HOH HOH . 
M 7 HOH B 9 609 70 HOH HOH . 
M 7 HOH B 10 610 93 HOH HOH . 
M 7 HOH B 11 611 63 HOH HOH . 
M 7 HOH B 12 612 138 HOH HOH . 
M 7 HOH B 13 613 3 HOH HOH . 
M 7 HOH B 14 614 130 HOH HOH . 
M 7 HOH B 15 615 44 HOH HOH . 
M 7 HOH B 16 616 82 HOH HOH . 
M 7 HOH B 17 617 54 HOH HOH . 
M 7 HOH B 18 618 190 HOH HOH . 
M 7 HOH B 19 619 35 HOH HOH . 
M 7 HOH B 20 620 85 HOH HOH . 
M 7 HOH B 21 621 47 HOH HOH . 
M 7 HOH B 22 622 15 HOH HOH . 
M 7 HOH B 23 623 123 HOH HOH . 
M 7 HOH B 24 624 134 HOH HOH . 
M 7 HOH B 25 625 20 HOH HOH . 
M 7 HOH B 26 626 73 HOH HOH . 
M 7 HOH B 27 627 104 HOH HOH . 
M 7 HOH B 28 628 80 HOH HOH . 
M 7 HOH B 29 629 183 HOH HOH . 
M 7 HOH B 30 630 217 HOH HOH . 
M 7 HOH B 31 631 172 HOH HOH . 
M 7 HOH B 32 632 125 HOH HOH . 
M 7 HOH B 33 633 163 HOH HOH . 
M 7 HOH B 34 634 180 HOH HOH . 
M 7 HOH B 35 635 86 HOH HOH . 
M 7 HOH B 36 636 216 HOH HOH . 
M 7 HOH B 37 637 142 HOH HOH . 
M 7 HOH B 38 638 132 HOH HOH . 
M 7 HOH B 39 639 187 HOH HOH . 
M 7 HOH B 40 640 191 HOH HOH . 
M 7 HOH B 41 641 167 HOH HOH . 
M 7 HOH B 42 642 196 HOH HOH . 
M 7 HOH B 43 643 202 HOH HOH . 
M 7 HOH B 44 644 41 HOH HOH . 
M 7 HOH B 45 645 211 HOH HOH . 
N 7 HOH C 1 5101 51 HOH HOH . 
N 7 HOH C 2 5102 32 HOH HOH . 
N 7 HOH C 3 5103 135 HOH HOH . 
N 7 HOH C 4 5104 39 HOH HOH . 
N 7 HOH C 5 5105 17 HOH HOH . 
N 7 HOH C 6 5106 33 HOH HOH . 
N 7 HOH C 7 5107 116 HOH HOH . 
N 7 HOH C 8 5108 87 HOH HOH . 
N 7 HOH C 9 5109 11 HOH HOH . 
N 7 HOH C 10 5110 23 HOH HOH . 
N 7 HOH C 11 5111 5 HOH HOH . 
N 7 HOH C 12 5112 14 HOH HOH . 
N 7 HOH C 13 5113 197 HOH HOH . 
N 7 HOH C 14 5114 79 HOH HOH . 
N 7 HOH C 15 5115 112 HOH HOH . 
N 7 HOH C 16 5116 72 HOH HOH . 
N 7 HOH C 17 5117 107 HOH HOH . 
N 7 HOH C 18 5118 225 HOH HOH . 
N 7 HOH C 19 5119 61 HOH HOH . 
N 7 HOH C 20 5120 88 HOH HOH . 
N 7 HOH C 21 5121 140 HOH HOH . 
N 7 HOH C 22 5122 203 HOH HOH . 
N 7 HOH C 23 5123 168 HOH HOH . 
N 7 HOH C 24 5124 208 HOH HOH . 
N 7 HOH C 25 5125 178 HOH HOH . 
N 7 HOH C 26 5126 170 HOH HOH . 
N 7 HOH C 27 5127 60 HOH HOH . 
N 7 HOH C 28 5128 210 HOH HOH . 
N 7 HOH C 29 5129 100 HOH HOH . 
N 7 HOH C 30 5130 224 HOH HOH . 
N 7 HOH C 31 5131 111 HOH HOH . 
N 7 HOH C 32 5132 207 HOH HOH . 
N 7 HOH C 33 5133 219 HOH HOH . 
N 7 HOH C 34 5134 120 HOH HOH . 
N 7 HOH C 35 5135 124 HOH HOH . 
N 7 HOH C 36 5136 201 HOH HOH . 
N 7 HOH C 37 5137 213 HOH HOH . 
N 7 HOH C 38 5138 165 HOH HOH . 
N 7 HOH C 39 5139 214 HOH HOH . 
O 7 HOH D 1 401 223 HOH HOH . 
O 7 HOH D 2 402 99 HOH HOH . 
O 7 HOH D 3 403 52 HOH HOH . 
O 7 HOH D 4 404 89 HOH HOH . 
O 7 HOH D 5 405 59 HOH HOH . 
O 7 HOH D 6 406 29 HOH HOH . 
O 7 HOH D 7 407 64 HOH HOH . 
O 7 HOH D 8 408 57 HOH HOH . 
O 7 HOH D 9 409 127 HOH HOH . 
O 7 HOH D 10 410 95 HOH HOH . 
O 7 HOH D 11 411 76 HOH HOH . 
O 7 HOH D 12 412 146 HOH HOH . 
O 7 HOH D 13 413 28 HOH HOH . 
O 7 HOH D 14 414 155 HOH HOH . 
O 7 HOH D 15 415 182 HOH HOH . 
O 7 HOH D 16 416 209 HOH HOH . 
P 7 HOH E 1 5101 177 HOH HOH . 
P 7 HOH E 2 5102 10 HOH HOH . 
P 7 HOH E 3 5103 204 HOH HOH . 
P 7 HOH E 4 5104 49 HOH HOH . 
P 7 HOH E 5 5105 40 HOH HOH . 
P 7 HOH E 6 5106 7 HOH HOH . 
P 7 HOH E 7 5107 12 HOH HOH . 
P 7 HOH E 8 5108 186 HOH HOH . 
P 7 HOH E 9 5109 55 HOH HOH . 
P 7 HOH E 10 5110 46 HOH HOH . 
P 7 HOH E 11 5111 92 HOH HOH . 
P 7 HOH E 12 5112 98 HOH HOH . 
P 7 HOH E 13 5113 108 HOH HOH . 
P 7 HOH E 14 5114 106 HOH HOH . 
P 7 HOH E 15 5115 150 HOH HOH . 
P 7 HOH E 16 5116 157 HOH HOH . 
P 7 HOH E 17 5117 162 HOH HOH . 
P 7 HOH E 18 5118 188 HOH HOH . 
P 7 HOH E 19 5119 103 HOH HOH . 
P 7 HOH E 20 5120 74 HOH HOH . 
P 7 HOH E 21 5121 67 HOH HOH . 
P 7 HOH E 22 5122 115 HOH HOH . 
P 7 HOH E 23 5123 222 HOH HOH . 
P 7 HOH E 24 5124 144 HOH HOH . 
P 7 HOH E 25 5125 156 HOH HOH . 
P 7 HOH E 26 5126 184 HOH HOH . 
P 7 HOH E 27 5127 171 HOH HOH . 
P 7 HOH E 28 5128 145 HOH HOH . 
P 7 HOH E 29 5129 161 HOH HOH . 
P 7 HOH E 30 5130 121 HOH HOH . 
Q 7 HOH F 1 401 139 HOH HOH . 
Q 7 HOH F 2 402 1 HOH HOH . 
Q 7 HOH F 3 403 53 HOH HOH . 
Q 7 HOH F 4 404 6 HOH HOH . 
Q 7 HOH F 5 405 68 HOH HOH . 
Q 7 HOH F 6 406 160 HOH HOH . 
Q 7 HOH F 7 407 26 HOH HOH . 
Q 7 HOH F 8 408 101 HOH HOH . 
Q 7 HOH F 9 409 50 HOH HOH . 
Q 7 HOH F 10 410 122 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               53.58 
_atom_site.Cartn_y               33.61 
_atom_site.Cartn_z               2.987 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        60.89 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           5001 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#