data_5F6V # _model_server_result.job_id BN6lD914nMP9ZpfqQqudog _model_server_result.datetime_utc '2024-11-25 09:44:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5f6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5F6V # _exptl.entry_id 5F6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.207 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-hydroxyphenyl)phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.96 _cell.angle_gamma 90 _cell.entry_id 5F6V _cell.length_a 50.757 _cell.length_b 35.233 _cell.length_c 57.951 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H10 O2' _chem_comp.formula_weight 186.207 _chem_comp.id 5VL _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-hydroxyphenyl)phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 5VL doub 1 n y C3 C2 5VL sing 2 n y O1 C2 5VL sing 3 n n C4 C5 5VL sing 4 n y C2 C7 5VL doub 5 n y C5 C6 5VL doub 6 n y C7 C6 5VL sing 7 n y C7 C8 5VL sing 8 n n C9 C8 5VL doub 9 n y C9 C10 5VL sing 10 n y C8 C13 5VL sing 11 n y C10 C11 5VL doub 12 n y C13 O14 5VL sing 13 n n C13 C12 5VL doub 14 n y C11 C12 5VL sing 15 n y C4 H1 5VL sing 16 n n C5 H2 5VL sing 17 n n C6 H3 5VL sing 18 n n C10 H4 5VL sing 19 n n O1 H5 5VL sing 20 n n C3 H6 5VL sing 21 n n C9 H7 5VL sing 22 n n C11 H8 5VL sing 23 n n C12 H9 5VL sing 24 n n O14 H10 5VL sing 25 n n # _atom_sites.entry_id 5F6V _atom_sites.fract_transf_matrix[1][1] 0.019702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007945 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5VL A 1 201 1 5VL LIG . C 3 HOH A 1 301 131 HOH HOH . C 3 HOH A 2 302 94 HOH HOH . C 3 HOH A 3 303 167 HOH HOH . C 3 HOH A 4 304 156 HOH HOH . C 3 HOH A 5 305 214 HOH HOH . C 3 HOH A 6 306 75 HOH HOH . C 3 HOH A 7 307 18 HOH HOH . C 3 HOH A 8 308 195 HOH HOH . C 3 HOH A 9 309 136 HOH HOH . C 3 HOH A 10 310 145 HOH HOH . C 3 HOH A 11 311 155 HOH HOH . C 3 HOH A 12 312 88 HOH HOH . C 3 HOH A 13 313 184 HOH HOH . C 3 HOH A 14 314 16 HOH HOH . C 3 HOH A 15 315 58 HOH HOH . C 3 HOH A 16 316 24 HOH HOH . C 3 HOH A 17 317 111 HOH HOH . C 3 HOH A 18 318 101 HOH HOH . C 3 HOH A 19 319 11 HOH HOH . C 3 HOH A 20 320 140 HOH HOH . C 3 HOH A 21 321 68 HOH HOH . C 3 HOH A 22 322 32 HOH HOH . C 3 HOH A 23 323 91 HOH HOH . C 3 HOH A 24 324 249 HOH HOH . C 3 HOH A 25 325 160 HOH HOH . C 3 HOH A 26 326 73 HOH HOH . C 3 HOH A 27 327 63 HOH HOH . C 3 HOH A 28 328 17 HOH HOH . C 3 HOH A 29 329 216 HOH HOH . C 3 HOH A 30 330 80 HOH HOH . C 3 HOH A 31 331 141 HOH HOH . C 3 HOH A 32 332 165 HOH HOH . C 3 HOH A 33 333 36 HOH HOH . C 3 HOH A 34 334 9 HOH HOH . C 3 HOH A 35 335 55 HOH HOH . C 3 HOH A 36 336 198 HOH HOH . C 3 HOH A 37 337 20 HOH HOH . C 3 HOH A 38 338 43 HOH HOH . C 3 HOH A 39 339 92 HOH HOH . C 3 HOH A 40 340 5 HOH HOH . C 3 HOH A 41 341 81 HOH HOH . C 3 HOH A 42 342 159 HOH HOH . C 3 HOH A 43 343 152 HOH HOH . C 3 HOH A 44 344 45 HOH HOH . C 3 HOH A 45 345 236 HOH HOH . C 3 HOH A 46 346 96 HOH HOH . C 3 HOH A 47 347 148 HOH HOH . C 3 HOH A 48 348 120 HOH HOH . C 3 HOH A 49 349 30 HOH HOH . C 3 HOH A 50 350 85 HOH HOH . C 3 HOH A 51 351 31 HOH HOH . C 3 HOH A 52 352 59 HOH HOH . C 3 HOH A 53 353 6 HOH HOH . C 3 HOH A 54 354 51 HOH HOH . C 3 HOH A 55 355 174 HOH HOH . C 3 HOH A 56 356 33 HOH HOH . C 3 HOH A 57 357 26 HOH HOH . C 3 HOH A 58 358 1 HOH HOH . C 3 HOH A 59 359 13 HOH HOH . C 3 HOH A 60 360 102 HOH HOH . C 3 HOH A 61 361 10 HOH HOH . C 3 HOH A 62 362 50 HOH HOH . C 3 HOH A 63 363 109 HOH HOH . C 3 HOH A 64 364 41 HOH HOH . C 3 HOH A 65 365 3 HOH HOH . C 3 HOH A 66 366 14 HOH HOH . C 3 HOH A 67 367 103 HOH HOH . C 3 HOH A 68 368 27 HOH HOH . C 3 HOH A 69 369 64 HOH HOH . C 3 HOH A 70 370 172 HOH HOH . C 3 HOH A 71 371 38 HOH HOH . C 3 HOH A 72 372 46 HOH HOH . C 3 HOH A 73 373 56 HOH HOH . C 3 HOH A 74 374 79 HOH HOH . C 3 HOH A 75 375 19 HOH HOH . C 3 HOH A 76 376 70 HOH HOH . C 3 HOH A 77 377 221 HOH HOH . C 3 HOH A 78 378 182 HOH HOH . C 3 HOH A 79 379 7 HOH HOH . C 3 HOH A 80 380 246 HOH HOH . C 3 HOH A 81 381 100 HOH HOH . C 3 HOH A 82 382 255 HOH HOH . C 3 HOH A 83 383 34 HOH HOH . C 3 HOH A 84 384 146 HOH HOH . C 3 HOH A 85 385 61 HOH HOH . C 3 HOH A 86 386 21 HOH HOH . C 3 HOH A 87 387 163 HOH HOH . C 3 HOH A 88 388 97 HOH HOH . C 3 HOH A 89 389 206 HOH HOH . C 3 HOH A 90 390 57 HOH HOH . C 3 HOH A 91 391 4 HOH HOH . C 3 HOH A 92 392 74 HOH HOH . C 3 HOH A 93 393 93 HOH HOH . C 3 HOH A 94 394 147 HOH HOH . C 3 HOH A 95 395 76 HOH HOH . C 3 HOH A 96 396 77 HOH HOH . C 3 HOH A 97 397 123 HOH HOH . C 3 HOH A 98 398 23 HOH HOH . C 3 HOH A 99 399 52 HOH HOH . C 3 HOH A 100 400 176 HOH HOH . C 3 HOH A 101 401 84 HOH HOH . C 3 HOH A 102 402 161 HOH HOH . C 3 HOH A 103 403 138 HOH HOH . C 3 HOH A 104 404 53 HOH HOH . C 3 HOH A 105 405 108 HOH HOH . C 3 HOH A 106 406 37 HOH HOH . C 3 HOH A 107 407 247 HOH HOH . C 3 HOH A 108 408 224 HOH HOH . C 3 HOH A 109 409 226 HOH HOH . C 3 HOH A 110 410 135 HOH HOH . C 3 HOH A 111 411 48 HOH HOH . C 3 HOH A 112 412 253 HOH HOH . C 3 HOH A 113 413 78 HOH HOH . C 3 HOH A 114 414 142 HOH HOH . C 3 HOH A 115 415 29 HOH HOH . C 3 HOH A 116 416 2 HOH HOH . C 3 HOH A 117 417 28 HOH HOH . C 3 HOH A 118 418 15 HOH HOH . C 3 HOH A 119 419 129 HOH HOH . C 3 HOH A 120 420 87 HOH HOH . C 3 HOH A 121 421 180 HOH HOH . C 3 HOH A 122 422 22 HOH HOH . C 3 HOH A 123 423 8 HOH HOH . C 3 HOH A 124 424 12 HOH HOH . C 3 HOH A 125 425 83 HOH HOH . C 3 HOH A 126 426 105 HOH HOH . C 3 HOH A 127 427 99 HOH HOH . C 3 HOH A 128 428 54 HOH HOH . C 3 HOH A 129 429 248 HOH HOH . C 3 HOH A 130 430 95 HOH HOH . C 3 HOH A 131 431 151 HOH HOH . C 3 HOH A 132 432 219 HOH HOH . C 3 HOH A 133 433 240 HOH HOH . C 3 HOH A 134 434 204 HOH HOH . C 3 HOH A 135 435 40 HOH HOH . C 3 HOH A 136 436 133 HOH HOH . C 3 HOH A 137 437 166 HOH HOH . C 3 HOH A 138 438 218 HOH HOH . C 3 HOH A 139 439 116 HOH HOH . C 3 HOH A 140 440 213 HOH HOH . C 3 HOH A 141 441 175 HOH HOH . C 3 HOH A 142 442 132 HOH HOH . C 3 HOH A 143 443 169 HOH HOH . C 3 HOH A 144 444 242 HOH HOH . C 3 HOH A 145 445 190 HOH HOH . C 3 HOH A 146 446 200 HOH HOH . C 3 HOH A 147 447 134 HOH HOH . C 3 HOH A 148 448 173 HOH HOH . C 3 HOH A 149 449 90 HOH HOH . C 3 HOH A 150 450 115 HOH HOH . C 3 HOH A 151 451 117 HOH HOH . C 3 HOH A 152 452 82 HOH HOH . C 3 HOH A 153 453 217 HOH HOH . C 3 HOH A 154 454 158 HOH HOH . C 3 HOH A 155 455 62 HOH HOH . C 3 HOH A 156 456 42 HOH HOH . C 3 HOH A 157 457 128 HOH HOH . C 3 HOH A 158 458 197 HOH HOH . C 3 HOH A 159 459 178 HOH HOH . C 3 HOH A 160 460 227 HOH HOH . C 3 HOH A 161 461 187 HOH HOH . C 3 HOH A 162 462 122 HOH HOH . C 3 HOH A 163 463 186 HOH HOH . C 3 HOH A 164 464 168 HOH HOH . C 3 HOH A 165 465 69 HOH HOH . C 3 HOH A 166 466 252 HOH HOH . C 3 HOH A 167 467 154 HOH HOH . C 3 HOH A 168 468 157 HOH HOH . C 3 HOH A 169 469 153 HOH HOH . C 3 HOH A 170 470 181 HOH HOH . C 3 HOH A 171 471 220 HOH HOH . C 3 HOH A 172 472 119 HOH HOH . C 3 HOH A 173 473 66 HOH HOH . C 3 HOH A 174 474 244 HOH HOH . C 3 HOH A 175 475 72 HOH HOH . C 3 HOH A 176 476 113 HOH HOH . C 3 HOH A 177 477 239 HOH HOH . C 3 HOH A 178 478 256 HOH HOH . C 3 HOH A 179 479 225 HOH HOH . C 3 HOH A 180 480 185 HOH HOH . C 3 HOH A 181 481 121 HOH HOH . C 3 HOH A 182 482 130 HOH HOH . C 3 HOH A 183 483 60 HOH HOH . C 3 HOH A 184 484 192 HOH HOH . C 3 HOH A 185 485 230 HOH HOH . C 3 HOH A 186 486 254 HOH HOH . C 3 HOH A 187 487 199 HOH HOH . C 3 HOH A 188 488 164 HOH HOH . C 3 HOH A 189 489 243 HOH HOH . C 3 HOH A 190 490 127 HOH HOH . C 3 HOH A 191 491 124 HOH HOH . C 3 HOH A 192 492 107 HOH HOH . C 3 HOH A 193 493 49 HOH HOH . C 3 HOH A 194 494 234 HOH HOH . C 3 HOH A 195 495 44 HOH HOH . C 3 HOH A 196 496 208 HOH HOH . C 3 HOH A 197 497 118 HOH HOH . C 3 HOH A 198 498 188 HOH HOH . C 3 HOH A 199 499 223 HOH HOH . C 3 HOH A 200 500 25 HOH HOH . C 3 HOH A 201 501 205 HOH HOH . C 3 HOH A 202 502 104 HOH HOH . C 3 HOH A 203 503 183 HOH HOH . C 3 HOH A 204 504 114 HOH HOH . C 3 HOH A 205 505 98 HOH HOH . C 3 HOH A 206 506 39 HOH HOH . C 3 HOH A 207 507 201 HOH HOH . C 3 HOH A 208 508 112 HOH HOH . C 3 HOH A 209 509 150 HOH HOH . C 3 HOH A 210 510 126 HOH HOH . C 3 HOH A 211 511 71 HOH HOH . C 3 HOH A 212 512 162 HOH HOH . C 3 HOH A 213 513 89 HOH HOH . C 3 HOH A 214 514 170 HOH HOH . C 3 HOH A 215 515 177 HOH HOH . C 3 HOH A 216 516 35 HOH HOH . C 3 HOH A 217 517 86 HOH HOH . C 3 HOH A 218 518 144 HOH HOH . C 3 HOH A 219 519 194 HOH HOH . C 3 HOH A 220 520 137 HOH HOH . C 3 HOH A 221 521 139 HOH HOH . C 3 HOH A 222 522 149 HOH HOH . C 3 HOH A 223 523 229 HOH HOH . C 3 HOH A 224 524 193 HOH HOH . C 3 HOH A 225 525 106 HOH HOH . C 3 HOH A 226 526 196 HOH HOH . C 3 HOH A 227 527 212 HOH HOH . C 3 HOH A 228 528 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 5VL . . . B 2 15.394 11.408 109.917 0.67 32.69 ? C4 5VL 201 A 1 HETATM 2 C C5 5VL . . . B 2 15.676 10.148 110.423 0.67 31.13 ? C5 5VL 201 A 1 HETATM 3 C C6 5VL . . . B 2 14.642 9.288 110.762 0.67 30.03 ? C6 5VL 201 A 1 HETATM 4 C C7 5VL . . . B 2 13.317 9.676 110.595 0.67 32.52 ? C7 5VL 201 A 1 HETATM 5 C C8 5VL . . . B 2 12.272 8.673 110.992 0.67 32.63 ? C8 5VL 201 A 1 HETATM 6 C C10 5VL . . . B 2 11.753 6.342 111.319 0.67 32.21 ? C10 5VL 201 A 1 HETATM 7 C C13 5VL . . . B 2 10.985 9.003 111.418 0.67 32.88 ? C13 5VL 201 A 1 HETATM 8 O O1 5VL . . . B 2 11.753 11.385 109.892 0.67 34.98 ? O1 5VL 201 A 1 HETATM 9 C C2 5VL . . . B 2 13.042 10.944 110.079 0.67 34.02 ? C2 5VL 201 A 1 HETATM 10 C C3 5VL . . . B 2 14.078 11.805 109.745 0.67 34.28 ? C3 5VL 201 A 1 HETATM 11 C C9 5VL . . . B 2 12.645 7.337 110.953 0.67 32.26 ? C9 5VL 201 A 1 HETATM 12 C C11 5VL . . . B 2 10.47 6.672 111.73 0.67 32.61 ? C11 5VL 201 A 1 HETATM 13 C C12 5VL . . . B 2 10.091 8.003 111.779 0.67 32.69 ? C12 5VL 201 A 1 HETATM 14 O O14 5VL . . . B 2 10.561 10.313 111.48 0.67 34.28 ? O14 5VL 201 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #